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Connectome-derived Biomarkers
NICARA™ for clinical trials
Biomarkers should be easy to obtain
Biomarkers should detect and quantify brain changes preceding gross atrophy
Biomarkers should respond to treatment
Biomarkers should serve as outcome marker in clinical trials
Biomarkers should be reproducible and reliable
Do your biomarkers fulfill all these requirements?
Biomarkers for Clinical Aging Studies - Requirements
Quality Prediction of Biomarkers in Aging Studies – A Real Challenge
Volumetric
Measurements
Widely used, but with
only moderate
prediction quality
Cognitive
Testing
Necessary,
but time consuming
and expensive
Sophisticated
markers from
PET-MRI, fMRI & DTI
Can greatly
enhance prediction
quality
Source: Kilimann et al., (2013) Curr Pharm Design 19, 6416-6425. (Review)
Connectome-derived Biomarkers for Aging Studies?
The CONNECTOME
can be extracted from tractography
(DTI) or from time series correlations
(fMRI, MEG, EEG).
The CONNECTOME
is directly affected by
neurodegeneration. Alzheimer‘s
disease (AD) as a disconnection
syndrome.
CONNECTOME
alterations correlate with cognitive
impairments.
Anti-dementive treatment was
reported to have a protective effect on
the structural and functional
CONNECTOME.
Source: Kilimann et al., (2013) Curr Pharm Design 19, 6416-6425. (Review)
However, extracting and analyzing the connectome requires expert knowledge in
neuroimaging and expensive hardware.
Our Solution: NICARA™
> NICARA provides fully automated
processing routines for structural
and functional connectome
extraction
> NICARA allows fully integrated
study management and catalog
functions for connectome data
> NICARA enables visualization,
exploration and comparisons of
multimodal connectome
information and morphometry.
NICARA Offers You Many Advantages
…precise patient
stratification
…better monitoring of
treatment outcome
… expert knowledge
…hardware
resources
> More precise patient characterization by earlier
detection of, e.g., accelerated neurodegeneration
> Better monitoring of treatment outcome by
connectome assessments before and after treatment
> Create more predictive biomarkers based on
morphometry and connectome changes
> No neuroimaging knowledge needed
> Hardware resources provided by Biomax
Informatics
Use Case: NICARA for Alzheimer’s Disease (AD)
(as an example for detecting brain changes in Aging, Neurodegeneration and Dementia)
A preferred DTI Pipeline for AD Connectomes
All pipeline tools executed
by NICARA are…
> open source
> validated in hundreds of
studies
> suggested as preferred
neuroimaging method for
AD drug development*.
*in Falcon C, et al. Neuroimaging Methods for MRI Analysis in CSF
Biomarkers Studies. Methods Mol Biol. In Biomarkers for Alzheimer’s
Disease Drug Development edited by Robert Perneczky (2018)
From Image to Feature Space: Exploring AD Connectomes
Fiber Density Maps
(Image Space)
3D Lattice Graph
(Feature Space)
> Image space
visualizations (e.g., fiber
density maps) give a
reliable overview of
the patient’s connectome.
> The feature space
representation allows for
more precise
quantification, multi-modal
connectome integration
and feasible inter-subject
comparability.
Reddish: high densities; Blueish: low densities of fibers of
a major white matter tract in DTI tractography
Bold lines: high fiber densities; Thin lines: low fiber densities
(DTI tractography of a subnetwork)
Characterization of AD Patients with Brain Network Comparison
AD Patient
Matched Control
> NICARA
detects differences in
the connectome of
AD patients and
healthy matched
controls of any fiber
tract* or functional
brain network.
AD patient: reduced densities
Healthy matched control: stronger and more connections
* here: Cingulum fiber tract
Easy to Interpret Patient Report
> NICARA delivers
an overview of
the patient‘s brain
connectivity in
comparison to
averaged
connectivity of
matched controls
and standard
distribution.
Effects of Treatment with Longitudinal Assessments
> NICARA helps
assess
longitudinal
changes in brain
connectivity
before and after
treatment.
Changes in brain connectivity from cold to warm colors Percentage changes (x-axis) of connections (y-axis)
(sorted from strongest increase to strongest decrease)
Morphometry Reports with NICARA
> NICARA
delivers
manifold reports
on the
quantification of
morphometry of
the patient’s
brain regions.
Connectivity Combined with Surface Based Morphometry
> Direct comparisons
between surface
based
morphometry of
brain regions and
surface based full
brain DTI
tractography for a
more precise
patient
characterization in
clinical trials.
Surface based morphometry: size and color of nodes
Surface based full brain DTI tractography: links between nodes
NICARA for Clinical Trials at a Glance
Brain data
visualization
Patient’s brain
connectivity in
comparison to
matched control
Better
characterization
of patients
Effects of
treatment
More precise
patient
stratification by
combining
connectivity
with
morphometry
Choose Biomax Informatics as your Preferred Partner
> We have more than 20 years of experience in knowledge management
for the life sciences
> We have a validated technology through multi-year contracts with reference
customers and thousands of users worldwide
> We have a multidisciplinary team of life science and software experts
> We have a flexible technology to adapt to your individual needs fast and
effectively
> We are fully GDPR compliant and certified according to ISO 9001 and
ISO 27001
Register a free demo account at nicara.eu
or contact nicara@biomax.com for a free consultation!
Interested in a DEMO of NICARA?

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Connectome-derived Biomarkers for clinical trials

  • 2. Biomarkers should be easy to obtain Biomarkers should detect and quantify brain changes preceding gross atrophy Biomarkers should respond to treatment Biomarkers should serve as outcome marker in clinical trials Biomarkers should be reproducible and reliable Do your biomarkers fulfill all these requirements? Biomarkers for Clinical Aging Studies - Requirements
  • 3. Quality Prediction of Biomarkers in Aging Studies – A Real Challenge Volumetric Measurements Widely used, but with only moderate prediction quality Cognitive Testing Necessary, but time consuming and expensive Sophisticated markers from PET-MRI, fMRI & DTI Can greatly enhance prediction quality Source: Kilimann et al., (2013) Curr Pharm Design 19, 6416-6425. (Review)
  • 4. Connectome-derived Biomarkers for Aging Studies? The CONNECTOME can be extracted from tractography (DTI) or from time series correlations (fMRI, MEG, EEG). The CONNECTOME is directly affected by neurodegeneration. Alzheimer‘s disease (AD) as a disconnection syndrome. CONNECTOME alterations correlate with cognitive impairments. Anti-dementive treatment was reported to have a protective effect on the structural and functional CONNECTOME. Source: Kilimann et al., (2013) Curr Pharm Design 19, 6416-6425. (Review) However, extracting and analyzing the connectome requires expert knowledge in neuroimaging and expensive hardware.
  • 5. Our Solution: NICARA™ > NICARA provides fully automated processing routines for structural and functional connectome extraction > NICARA allows fully integrated study management and catalog functions for connectome data > NICARA enables visualization, exploration and comparisons of multimodal connectome information and morphometry.
  • 6. NICARA Offers You Many Advantages …precise patient stratification …better monitoring of treatment outcome … expert knowledge …hardware resources > More precise patient characterization by earlier detection of, e.g., accelerated neurodegeneration > Better monitoring of treatment outcome by connectome assessments before and after treatment > Create more predictive biomarkers based on morphometry and connectome changes > No neuroimaging knowledge needed > Hardware resources provided by Biomax Informatics
  • 7. Use Case: NICARA for Alzheimer’s Disease (AD) (as an example for detecting brain changes in Aging, Neurodegeneration and Dementia)
  • 8. A preferred DTI Pipeline for AD Connectomes All pipeline tools executed by NICARA are… > open source > validated in hundreds of studies > suggested as preferred neuroimaging method for AD drug development*. *in Falcon C, et al. Neuroimaging Methods for MRI Analysis in CSF Biomarkers Studies. Methods Mol Biol. In Biomarkers for Alzheimer’s Disease Drug Development edited by Robert Perneczky (2018)
  • 9. From Image to Feature Space: Exploring AD Connectomes Fiber Density Maps (Image Space) 3D Lattice Graph (Feature Space) > Image space visualizations (e.g., fiber density maps) give a reliable overview of the patient’s connectome. > The feature space representation allows for more precise quantification, multi-modal connectome integration and feasible inter-subject comparability. Reddish: high densities; Blueish: low densities of fibers of a major white matter tract in DTI tractography Bold lines: high fiber densities; Thin lines: low fiber densities (DTI tractography of a subnetwork)
  • 10. Characterization of AD Patients with Brain Network Comparison AD Patient Matched Control > NICARA detects differences in the connectome of AD patients and healthy matched controls of any fiber tract* or functional brain network. AD patient: reduced densities Healthy matched control: stronger and more connections * here: Cingulum fiber tract
  • 11. Easy to Interpret Patient Report > NICARA delivers an overview of the patient‘s brain connectivity in comparison to averaged connectivity of matched controls and standard distribution.
  • 12. Effects of Treatment with Longitudinal Assessments > NICARA helps assess longitudinal changes in brain connectivity before and after treatment. Changes in brain connectivity from cold to warm colors Percentage changes (x-axis) of connections (y-axis) (sorted from strongest increase to strongest decrease)
  • 13. Morphometry Reports with NICARA > NICARA delivers manifold reports on the quantification of morphometry of the patient’s brain regions.
  • 14. Connectivity Combined with Surface Based Morphometry > Direct comparisons between surface based morphometry of brain regions and surface based full brain DTI tractography for a more precise patient characterization in clinical trials. Surface based morphometry: size and color of nodes Surface based full brain DTI tractography: links between nodes
  • 15. NICARA for Clinical Trials at a Glance Brain data visualization Patient’s brain connectivity in comparison to matched control Better characterization of patients Effects of treatment More precise patient stratification by combining connectivity with morphometry
  • 16. Choose Biomax Informatics as your Preferred Partner > We have more than 20 years of experience in knowledge management for the life sciences > We have a validated technology through multi-year contracts with reference customers and thousands of users worldwide > We have a multidisciplinary team of life science and software experts > We have a flexible technology to adapt to your individual needs fast and effectively > We are fully GDPR compliant and certified according to ISO 9001 and ISO 27001
  • 17. Register a free demo account at nicara.eu or contact nicara@biomax.com for a free consultation! Interested in a DEMO of NICARA?