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Recombinant DNA Technology

        Presented by
       Mona AL Boreikan
What is recombinant DNA?
● Recombinant DNA is the formation of a novel
 DNA sequence by the formation of two DNA
 strands.
● These are taken from two different organisms.
● These recombinant DNA molecules can be
 made with recombinant DNA technology.
What is recombinant DNA technology?

 The procedure is to cut the DNA of the donor
      organism into pieces with restriction
 enzymes, and insert one of these fragments into
             the DNA of the host.
Recombinant DNA technology
             =
    Genetic engineering
             =
       Gene cloning
The History of Recombinant DNA Technology

• 1970 Hamilton Smith, at Johns
  Hopkins Medical School, isolates
  the first restriction enzyme, an
  enzyme that cuts DNA at a very
  specific nucleotide sequence.
  Over the next few years, several
  more restriction enzymes will be
  isolated.
• 1972 Stanley Cohen and Herbert
  Boyer combine their efforts to
  create recombinant DNA. This
  technology will be the beginning
  of the biotechnology industry.
The History of Recombinant DNA Technology

• 1976 Herbert Boyer
  cofounds Genentech, the
  first firm founded in the
  United States to apply
  recombinant DNA
  technology.
• 1978 Somatostatin, which
  regulates human growth
  hormones, is the first
  human protein made
  using recombinant
  technology.
What Required for Recombinant DNA Technology

First ; Cloning Vectors

   A cloning vector is
    a small piece of
   DNA into which a
  foreign DNA fragment
    can be inserted.
What are the kinds of Cloning Vectors


1- Plasmid Cloning Vectors
2- Bacteriophage Vectors
3- Cosmids Vectors
4- (BACs)
5- YACs
1- Plasmid Cloning Vectors

• A plasmid is a DNA molecule
  that is separate from the
  chromosomal DNA.
• It can replicate
  independently of the
  chromosomal DNA.
• It is double-stranded and, in
  many cases, circular.
• Plasmid sizes vary from 1 to
  over 1,000 kilobase pairs
  (kbp), but it can only contain    Illustration of a bacterium with plasmid
  inserts of about 1–10 kbp.       enclosed showing chromosomal DNA and
                                                     plasmids
1- Plasmid Cloning Vectors
• Origin of replication (ORI).
• Plasmid is used to multiply (make many copies of) or express
  particular genes.
• Plasmid containing genes that make cells resistant to particular
  antibiotics, Selectable marker(s)
• Plasmid containing a multiple cloning site (MCS, or polylinker).
1- Plasmid Cloning Vectors
          How are the plasmids inserted into bacteria?




There are two types of plasmid integration into a host bacteria: Non-integrating plasmids replicate as
 with the top instance; whereas episomes, the lower example, integrate into the host chromosome
1- Plasmid Cloning Vectors
Cloning DNA into a Plasmid to Produce Recombinant DNA
2- Bacteriophage Vectors
● Bacteriophage is any one
   of a number of viruses
   that infect bacteria.
● Commonly based upon l
   phage. Lambda phage is a
   virus particle consisting of
   a head, containing
   double-stranded linear
   DNA as its genetic
   material, and a tail that
   can have tail fibers.
                                  The structure of a typical
                                    tailed bacteriophage
2- Bacteriophage Vectors
● Most internal genes deleted.
● Insert DNA into middle region (up to10-15 kb)
● The phage genes expressed in lysogenic cycle code for proteins
   that repress expression of other phage genes.
2- Bacteriophage Vectors
How the DNA phage inserted into bacteria?




             The lysogenic and Lytic cycle.
2- Bacteriophage Vectors
Cloning DNA into Bacteriophage to Produce Recombinant DNA
3- Cosmids Vectors
•   Cosmid type of hybrid plasmid.
•   Plasmid with λ phage packaging sequence (cos)
•   Cosmids are able to contain 37 to 52 kb of DNA.
•   Packaged into λ particles and injected into host cells.
•   Circularizes in cell and continues as a large plasmid
3- Cosmids Vectors
Cloning DNA by cosmid to Produce Recombinant DNA
3- (BACs) Vectors
• Bacterial artificial
  chromosome.
• Can clone up to 200 kb
  DNA fragments.
• Based upon F plasmid.
• A similar cloning
  vector, called a PAC has
  also been produced from
  the bacterial P1-plasmid.
• Origin, selectable
  marker, promoters to
  expressed cloned genes
3- (BACs) Vectors



  How the
     BAC
  inserted
into bacteria
 to Produce
Recombinant
    DNA?
4 - (YACs) Vectors



• Yeast artificial
  chromosomes
• Have
  centromere, telome
  res and an origin of
  replication, plus
  selectable markers
• Cloned segments of
  250 kb
4 - (YACs) Vectors



  How the
     YAC
  inserted
into yeast to
  Produce
Recombinant
    DNA?
Summary of vectors and what they can carry.

The size of DNA that vector
                                               Vector
         can carry
       0 – 10 kb                         Standard plasmid
       0 – 23 Kb                      Lambda Bacteriophage
       30 – 44 Kb                              Cosmid
       70 – 100 Kb                       Bacteriophage P1
      130 – 150 Kb               P1 Artificial chromosome PAC
    Maximum 300 Kb            Bacterial Artificial Chromosome BAC

          0.2 – 2 Mb           Yeast Artificial Chromosome   YAC


               kb (= kbp) = kilo base pairs = 1,000 bp
               Mb = mega base pairs = 1,000,000 bp
5 - Expression Vectors
• Also known as an
  expression
  construct
• It include
  regulatable high
  level expression
  promoter
   – T7 phage
      promoter
   – lac operator
   – lac repressor
      gene
The three most important signals for Expression.
What Required for Recombinant DNA Technology

                      Second; Enzymes
   A- Restriction enzyme
• OR restriction endonuclease) is an enzyme that cuts double-
  stranded or single stranded DNA at specific recognition
  nucleotide sequences known as restriction sites.
Summary of some kinds of Restriction
   enzymes and their cut sites.
Second; Enzymes
 B - A DNA ligase enzyme

• Catalyse the joining or recombining of DNA fragments
  (ligation).




       DNA ligase                Ligation by DNA ligase enzyme
What the steps for recombinant DNA technology?
• Protocol;
   – Isolate target DNA
   – Cut with RE
   – Ligate to vector
   – Transform to host
     cells
   – Plate on antibiotic-
     containing medium
   – Identify recombinant
     plasmids
   – Identify/characterize
     specific clones
What the steps for recombinant DNA technology?
Examining the results of a
     restriction digest ( after recombinant )
After treatment with a
         restriction
      endonuclease,
  the resulting DNA
    fragments can be
         examined
     by agarose gel
    electrophoresis to
         determine
their sizes and to make   An agarose gel plate. The hybridized DNA
  shore if recombinant    strands show a pink light because of the
 DNA happened or not.     binding of the fluorescent labeled probe.
What is Gel Electrophoresis

• A technique used to separate DNA fragments by
  size
• The gel (agarose or polyacrylamide) is subjected to
  an electrical field
• The DNA, which is negatively-charged, migrates
  towards the positive pole.
• The larger the DNA fragment, the slower it will
  move through the gel matrix.
• DNA is visualized using fluorescent dyes.
Other types of
Reproductive Cloning
 * Reproductive cloning is
 performed with the
 express intent of creating
 another organism.
* This organism is the exact
duplicate of one that
already exists or has existed
in the past.
* Cloning of
plants, animals, and
humans falls into the class
of reproductive cloning
How is Reproductive Cloning Performed?
* It is performed using a technique called Somatic Cell Nuclear Transfer (SCNT).
* The genetic material from a donor egg is removed, so that you are left with an
    empty egg.
* Then, a cell is taken from the organism to be cloned and its nucleus is removed.
* This nucleus is then transferred into the empty donor egg.
What Is Reproductive Cloning Used For?
Reproductive cloning has only
  been used for research
  purposes.
Reproductive cloning could be
  used effectively for
  repopulating endangered
  species or to help make
  breeding of specific animals
  easier.
Reproductive cloning uses could
  also include the production of
  organisms with specific
  characteristics, such as drug-
  producing animals or
  genetically "unique" animals.
Dolly was created in a process called
  “Somatic Cell Nuclear Transfer”




Professor Ian Wilmut is now a Sir for his work creating the world’s first cloned
                          mammal in 1996 - 2003
Therapeutic Cloning

• It is performed, not to
  produce another
  organism, but to harvest
  embryonic stem cells for
  use in medical treatments.
• Embryonic stem cells are
  those cells found inside of
  developing embryos.
• They can be used to
  produce a number of
  different cells including
  tissue, muscle, and organ
  cells.
How is Therapeutic Cloning Performed?
* A cell is removed from the patient requiring medical treatment.
* The nucleus of this cell is removed and inserted into an empty donor egg.
* Division is encouraged through the use of special chemicals or an electric
   current.
* The resulting embryonic stem cells are then removed from this embryo and
   used to treat the patient.
What is Therapeutic Cloning Used For?
• Therapeutic cloning is intended for medical use.
• The embryonic stem cells that this type of cloning produces can be
  used to create skin for burn victims, organs for transplant patients, or
  cells for those with spinal cord injuries.
What is Therapeutic Cloning Used For?
• And because the cells come from the patient herself, there are
  no issues of cell rejection.
• Therapeutic cloning may also help those suffering from heart
  disease, Alzheimer's Disease, or Parkinson's Disease.
Can organs be cloned for use in transplants?
 Scientists think that therapeutic
  cloning can be used to make
  tissues and organs for transplants.
 To do this, DNA would be taken
  from the person who needs the
  transplant and put in a egg. After
  the egg with the patient's DNA
  starts to divide, embryonic stem
  cells that can be transformed into
  any type of tissue would be
  harvested..
 Stem cells would generate an
  organ or tissue that is a genetic
  match to the recipient, as a result
  organ donation would reduce
  significantly.
Risks of Cloning
 More than 90% of cloning attempts fail to produce viable
  offspring
 Cloned animals tend to have higher rates of infection tumor
  growth, and other disorders.
 Clones have been known to die mysteriously.
 Because of the lack of
  understanding about
  reproductive cloning
  scientists believe it is
  unethical to attempt
  to clone humans.

 About 30% of clones
  born alive are
  affected with “large
  offspring syndrome”
• Several cloned
  animals have died
  prematurely from
  infections or other
  complications, the
  same problems would
  be expected in human
  cloning
• The attempt to clone
  humans at this time is
  considered
  potentially dangerous,
  and ethically
  irresponsible.
The End

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Recombinant dna technology.pptx mona

  • 1. Recombinant DNA Technology Presented by Mona AL Boreikan
  • 2. What is recombinant DNA? ● Recombinant DNA is the formation of a novel DNA sequence by the formation of two DNA strands. ● These are taken from two different organisms. ● These recombinant DNA molecules can be made with recombinant DNA technology.
  • 3. What is recombinant DNA technology? The procedure is to cut the DNA of the donor organism into pieces with restriction enzymes, and insert one of these fragments into the DNA of the host.
  • 4. Recombinant DNA technology = Genetic engineering = Gene cloning
  • 5. The History of Recombinant DNA Technology • 1970 Hamilton Smith, at Johns Hopkins Medical School, isolates the first restriction enzyme, an enzyme that cuts DNA at a very specific nucleotide sequence. Over the next few years, several more restriction enzymes will be isolated. • 1972 Stanley Cohen and Herbert Boyer combine their efforts to create recombinant DNA. This technology will be the beginning of the biotechnology industry.
  • 6. The History of Recombinant DNA Technology • 1976 Herbert Boyer cofounds Genentech, the first firm founded in the United States to apply recombinant DNA technology. • 1978 Somatostatin, which regulates human growth hormones, is the first human protein made using recombinant technology.
  • 7. What Required for Recombinant DNA Technology First ; Cloning Vectors A cloning vector is a small piece of DNA into which a foreign DNA fragment can be inserted.
  • 8. What are the kinds of Cloning Vectors 1- Plasmid Cloning Vectors 2- Bacteriophage Vectors 3- Cosmids Vectors 4- (BACs) 5- YACs
  • 9. 1- Plasmid Cloning Vectors • A plasmid is a DNA molecule that is separate from the chromosomal DNA. • It can replicate independently of the chromosomal DNA. • It is double-stranded and, in many cases, circular. • Plasmid sizes vary from 1 to over 1,000 kilobase pairs (kbp), but it can only contain Illustration of a bacterium with plasmid inserts of about 1–10 kbp. enclosed showing chromosomal DNA and plasmids
  • 10. 1- Plasmid Cloning Vectors • Origin of replication (ORI). • Plasmid is used to multiply (make many copies of) or express particular genes. • Plasmid containing genes that make cells resistant to particular antibiotics, Selectable marker(s) • Plasmid containing a multiple cloning site (MCS, or polylinker).
  • 11. 1- Plasmid Cloning Vectors How are the plasmids inserted into bacteria? There are two types of plasmid integration into a host bacteria: Non-integrating plasmids replicate as with the top instance; whereas episomes, the lower example, integrate into the host chromosome
  • 12. 1- Plasmid Cloning Vectors Cloning DNA into a Plasmid to Produce Recombinant DNA
  • 13. 2- Bacteriophage Vectors ● Bacteriophage is any one of a number of viruses that infect bacteria. ● Commonly based upon l phage. Lambda phage is a virus particle consisting of a head, containing double-stranded linear DNA as its genetic material, and a tail that can have tail fibers. The structure of a typical tailed bacteriophage
  • 14. 2- Bacteriophage Vectors ● Most internal genes deleted. ● Insert DNA into middle region (up to10-15 kb) ● The phage genes expressed in lysogenic cycle code for proteins that repress expression of other phage genes.
  • 15. 2- Bacteriophage Vectors How the DNA phage inserted into bacteria? The lysogenic and Lytic cycle.
  • 16. 2- Bacteriophage Vectors Cloning DNA into Bacteriophage to Produce Recombinant DNA
  • 17. 3- Cosmids Vectors • Cosmid type of hybrid plasmid. • Plasmid with λ phage packaging sequence (cos) • Cosmids are able to contain 37 to 52 kb of DNA. • Packaged into λ particles and injected into host cells. • Circularizes in cell and continues as a large plasmid
  • 18. 3- Cosmids Vectors Cloning DNA by cosmid to Produce Recombinant DNA
  • 19. 3- (BACs) Vectors • Bacterial artificial chromosome. • Can clone up to 200 kb DNA fragments. • Based upon F plasmid. • A similar cloning vector, called a PAC has also been produced from the bacterial P1-plasmid. • Origin, selectable marker, promoters to expressed cloned genes
  • 20. 3- (BACs) Vectors How the BAC inserted into bacteria to Produce Recombinant DNA?
  • 21. 4 - (YACs) Vectors • Yeast artificial chromosomes • Have centromere, telome res and an origin of replication, plus selectable markers • Cloned segments of 250 kb
  • 22. 4 - (YACs) Vectors How the YAC inserted into yeast to Produce Recombinant DNA?
  • 23. Summary of vectors and what they can carry. The size of DNA that vector Vector can carry 0 – 10 kb Standard plasmid 0 – 23 Kb Lambda Bacteriophage 30 – 44 Kb Cosmid 70 – 100 Kb Bacteriophage P1 130 – 150 Kb P1 Artificial chromosome PAC Maximum 300 Kb Bacterial Artificial Chromosome BAC 0.2 – 2 Mb Yeast Artificial Chromosome YAC kb (= kbp) = kilo base pairs = 1,000 bp Mb = mega base pairs = 1,000,000 bp
  • 24. 5 - Expression Vectors • Also known as an expression construct • It include regulatable high level expression promoter – T7 phage promoter – lac operator – lac repressor gene
  • 25. The three most important signals for Expression.
  • 26. What Required for Recombinant DNA Technology Second; Enzymes A- Restriction enzyme • OR restriction endonuclease) is an enzyme that cuts double- stranded or single stranded DNA at specific recognition nucleotide sequences known as restriction sites.
  • 27. Summary of some kinds of Restriction enzymes and their cut sites.
  • 28. Second; Enzymes B - A DNA ligase enzyme • Catalyse the joining or recombining of DNA fragments (ligation). DNA ligase Ligation by DNA ligase enzyme
  • 29. What the steps for recombinant DNA technology? • Protocol; – Isolate target DNA – Cut with RE – Ligate to vector – Transform to host cells – Plate on antibiotic- containing medium – Identify recombinant plasmids – Identify/characterize specific clones
  • 30. What the steps for recombinant DNA technology?
  • 31. Examining the results of a restriction digest ( after recombinant ) After treatment with a restriction endonuclease, the resulting DNA fragments can be examined by agarose gel electrophoresis to determine their sizes and to make An agarose gel plate. The hybridized DNA shore if recombinant strands show a pink light because of the DNA happened or not. binding of the fluorescent labeled probe.
  • 32. What is Gel Electrophoresis • A technique used to separate DNA fragments by size • The gel (agarose or polyacrylamide) is subjected to an electrical field • The DNA, which is negatively-charged, migrates towards the positive pole. • The larger the DNA fragment, the slower it will move through the gel matrix. • DNA is visualized using fluorescent dyes.
  • 33.
  • 35. Reproductive Cloning * Reproductive cloning is performed with the express intent of creating another organism. * This organism is the exact duplicate of one that already exists or has existed in the past. * Cloning of plants, animals, and humans falls into the class of reproductive cloning
  • 36. How is Reproductive Cloning Performed? * It is performed using a technique called Somatic Cell Nuclear Transfer (SCNT). * The genetic material from a donor egg is removed, so that you are left with an empty egg. * Then, a cell is taken from the organism to be cloned and its nucleus is removed. * This nucleus is then transferred into the empty donor egg.
  • 37. What Is Reproductive Cloning Used For? Reproductive cloning has only been used for research purposes. Reproductive cloning could be used effectively for repopulating endangered species or to help make breeding of specific animals easier. Reproductive cloning uses could also include the production of organisms with specific characteristics, such as drug- producing animals or genetically "unique" animals.
  • 38. Dolly was created in a process called “Somatic Cell Nuclear Transfer” Professor Ian Wilmut is now a Sir for his work creating the world’s first cloned mammal in 1996 - 2003
  • 39. Therapeutic Cloning • It is performed, not to produce another organism, but to harvest embryonic stem cells for use in medical treatments. • Embryonic stem cells are those cells found inside of developing embryos. • They can be used to produce a number of different cells including tissue, muscle, and organ cells.
  • 40. How is Therapeutic Cloning Performed? * A cell is removed from the patient requiring medical treatment. * The nucleus of this cell is removed and inserted into an empty donor egg. * Division is encouraged through the use of special chemicals or an electric current. * The resulting embryonic stem cells are then removed from this embryo and used to treat the patient.
  • 41. What is Therapeutic Cloning Used For? • Therapeutic cloning is intended for medical use. • The embryonic stem cells that this type of cloning produces can be used to create skin for burn victims, organs for transplant patients, or cells for those with spinal cord injuries.
  • 42. What is Therapeutic Cloning Used For? • And because the cells come from the patient herself, there are no issues of cell rejection. • Therapeutic cloning may also help those suffering from heart disease, Alzheimer's Disease, or Parkinson's Disease.
  • 43. Can organs be cloned for use in transplants?  Scientists think that therapeutic cloning can be used to make tissues and organs for transplants.  To do this, DNA would be taken from the person who needs the transplant and put in a egg. After the egg with the patient's DNA starts to divide, embryonic stem cells that can be transformed into any type of tissue would be harvested..  Stem cells would generate an organ or tissue that is a genetic match to the recipient, as a result organ donation would reduce significantly.
  • 44. Risks of Cloning  More than 90% of cloning attempts fail to produce viable offspring  Cloned animals tend to have higher rates of infection tumor growth, and other disorders.  Clones have been known to die mysteriously.
  • 45.  Because of the lack of understanding about reproductive cloning scientists believe it is unethical to attempt to clone humans.  About 30% of clones born alive are affected with “large offspring syndrome”
  • 46. • Several cloned animals have died prematurely from infections or other complications, the same problems would be expected in human cloning • The attempt to clone humans at this time is considered potentially dangerous, and ethically irresponsible.