Panel members v2_datajournals_repositories_repofringe3aug2015
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Repository Fringe 2015 Panel discussion: Building data networks: exploring trust and interoperability between authors, repositories and journals
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Panel members v2_datajournals_repositories_repofringe3aug2015
- 1. Building data networks: exploring trust and interoperability between authors, repositories and journals Chair: Varsha Khodiyar, nature.com Panel members: Neil Chue Hong, Journal of Open Research Software Rachael Kotarski, DataCite Reza Salek, European Bioinformatics Institute Peter McQuilton, BioSharing
- 3. Software Sustainability Institute www.software.ac.uk Neil Chue Hong Director, Software Sustainability Institute Editor-in-Chief, Journal of Open Research Software Repository Fringe 2015, Edinburgh, 3-4 August 2015 Neil Chue Hong (@npch), Software Sustainability Institute ORCID: 0000-0002-8876-7606 | N.ChueHong@software.ac.uk Unless otherwise indicated these slides licensed under Supported by Project funding from
- 4. Software Sustainability Institute www.software.ac.uk A Journal for Software Papers http://openresearchsoftware.metajnl.com
- 5. Software Sustainability Institute www.software.ac.uk JORS software metapaper
- 6. Software Sustainability Institute www.software.ac.uk ReferencesReuse ScreenshotsIntroduction Implementation + Usage Anatomy of a software meta- paper Metadata Metadata Quality Control
- 7. www.bl.uk 7 DataCite UK • 52 Data Centres / Universities / other organisations using DataCite in the UK • Assigning DOIs to data, theses and software among other things
- 8. www.bl.uk 8 British Library Leverage the Library’s collections and expertise to drive innovation in large-scale data analytics, for the wider benefit of UK research • Providing our digital collections as ‘data’ – http://labs.bl.uk/ – http://www.bl.uk/bibliographic/datafree.html • Alan Turing Institute will be physically hosted in the British Library building
- 9. MetaboLights: Metabolomics data sharing and Data standards Reza Salek Cheminformatics and Metabolism EBI August 2015
- 10. Databases and services Genomes Ensembl Ensembl Genomes EGA Nucleotide sequence ENA Functional genomics ArrayExpress Expression Atlas Protein Sequences UniProt Protein families, motifs and domains InterPro Macromolecular PDBe Protein activity IntAct , PRIDE Cheminformatics & Metabolism MetaboLights, ChEBI Pathways Reactome Systems BioModels BioSamples Literature and ontologies PubMC, GO Chemogenomics ChEMBL
- 11. Data Standards COordination of Standards in MetabOlomicS MetaboLights – metabolomics repository
Notas do Editor
- A metajournal which encourages the publication of information that encourages the reuse of software. A way of using the current tools and practices to make software better recognised.
- I am part of the team running DataCite in the UK. We work with organisations to provide persistent identifiers in the form of DOIs for their research data – although they are applied to other objects as well.
- My other role is generally looking at the data activities of the Library. This is important for the Library right now, as one of the key aims of the Library’s current strategy (‘Living Knowledge’) is this: