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03.20.2012




Accelerating Data Management
Research Data Access and Preservation Summit
March 22, 2012


Dave Fellinger
Chief Scientist, Office of Strategy & Technology



           ©2012 DataDirect Networks. All Rights Reserved.
Data Management

    Data management can consist of;
    ► Access management
      •   Client access and maintenance
      •   User permissions
      •   Policies including data security
      •   Policies including data continuance
    ► Data manipulation utilizing microservices
      •   Data checking
      •   Implementing processes such as reduction and filtering
      •   Data registration and metadata extraction
      •   Data migration



3            ©2012 DataDirect Networks. All Rights Reserved.
Sources of Service Latency

    ► Hardware Chain
      •   Disk drive servo operation
      •   Multiple SCSI layers
      •   Multiple bus transitions
      •   Memory bandwidth limitations
      •   Network service latencies
    ► Software Chain
      • Memory copies
      • Kernel operations
      • Layers of consecutive operations including the service of V-nodes,
        I-nodes and FAT
      • Serial data transport processes



4            ©2012 DataDirect Networks. All Rights Reserved.
What is „Embedded Processing‟?
 And why ?



► Do data intensive processing as „close‟ to the storage as possible.
  • Bring computing to the data instead of bring data to computing
► HADOOP is an example of this approach.

► Why Embedded Processing?
► Moving data is a lot of work
► A lot of infrastructure needed


    Client sends a request to storage (red ball)

                                                                           Client
                          But what we really want is :
► So how do we do that?                                                   Storage

                                                               Storage responds with data (blue ball)

             ©2012 DataDirect Networks. All Rights Reserved.
Storage with Virtual Machines
                               8 x IB QDR/10GbE Host Ports (No Fibre Channel)

                                                      Interface Virtualization

  Virtual                                Virtual                                  Virtual    Virtual
 Machine                                Machine                                  Machine    Machine




                                                     System memory


                                                    RAID Processors                         High-Speed Cache   Cache Link




                                                      Internal SAS Switching




        ©2012 DataDirect Networks. All Rights Reserved.
Repurposing Interface Processors

► In the block based SFA10K platform, the IF processors are
  responsible for mapping Virtual Disks to LUNs on FC or IB

► In the SFA10KE platform the IF processors are running VMs
► The OS running on those VMs uses a driver to access the
  RAID processors directly
► RAID processors place data (or use data) directly in the
  VM‟s memory
► One hop from disk to VM‟s memory

► Now the storage is no longer a block device
► It is a storage appliance with processing capabilities

        ©2012 DataDirect Networks. All Rights Reserved.
Example configuration

► Now we can put iRODS inside the RAID controllers
► The iCAT processor has lots of memory and SSDs for DB storage
► Either use all VMs for iRODS or add a parallel filesystem such as
  GPFS for fast scratch
► The filesystem uses SAS for frequent used files and SATA for the
  rest
► The following example is a mix of iRODS with GPFS
  • This give iRODS the fastest access to the storage because it doesn‟t have
    to go onto the network to access a fileserver. It lives inside the fileserver.
  • The same filesystem is also visible from an external compute cluster via
    GPFS running on the remaining VMs


► This is only one controller, the 4 VMs on the other controller need
  some work too
  • They see the same storage and can access it at the same speed.
         ©2012 DataDirect Networks. All Rights Reserved.
Example configuration
                                                                    8x 10GbE Host Ports

                                                                Interface Virtualization

Virtual                             Virtual                                  Virtual                         Virtual
Machine
          Linux                     Machine
                                                      Linux                  Machine
                                                                                           Linux             Machine
                                                                                                                        Linux
                 iCAT
                                                             GPFS                               GPFS                           GPFS
            SFA Driver                                   SFA Driver                          SFA Driver                     SFA Driver


      16 GB                                      8 GB                                         8GB                             8GB
     memory                                    memory          System memory               memory                          memory
     allocated                                 allocated                                   allocated                       allocated


                                                              RAID Processors                                        High-Speed Cache    Cache Link




                                                                Internal SAS Switching



            RAID sets                                                         RAID sets with              RAID sets with
          with 2TB SSD                                                         300TB SATA                  30TB SAS
                  ©2012 DataDirect Networks. All Rights Reserved.
Running Micro Services as a VM

► Since iRODS runs inside the controller we now can run
  iRODS MicroServices right on top of the storage.
► The storage has become an iRODS appliance „speaking‟
  iRODS natively.
► iRODS can execute “in-band” operations registering data
  and extracting metadata during injest.
► We could create „hot‟ directories that kick off processing
  depending on the type of incoming data.




        ©2012 DataDirect Networks. All Rights Reserved.
Conclusion

 ► The elimination of software or hardware layers increases
   reliability and decreases latency.
 ► Automated, policy based services can be run within a
   storage environment.
 ► Policy execution can include data migration, data
   checking, or data manipulation by calling or scheduling
   microservices.
 Data intensive operations executed by a server can cause
   network traffic and SCSI bus transaction latency. Moving
   these operations to the storage is efficient and easily
   managed.

11     ©2012 DataDirect Networks. All Rights Reserved.
Questions?



DataDirect Networks, Information in Motion, Silicon Storage Appliance, S2A, Storage Fusion Architecture, SFA, Storage Fusion Fabric, Web Object Scaler, WOS, EXAScaler, GRIDScaler,
       xSTREAMScaler, NAS Scaler, ReAct, ObjectAssure, In-Storage Processing and SATAssure are all trademarks of DataDirect Networks. Any unauthorized use is prohibited.
  12                   ©2012 DataDirect Networks. All Rights Reserved.

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Accelerating Data Management - Dave Fellinger - RDAP12

  • 1. 03.20.2012 Accelerating Data Management Research Data Access and Preservation Summit March 22, 2012 Dave Fellinger Chief Scientist, Office of Strategy & Technology ©2012 DataDirect Networks. All Rights Reserved.
  • 2. Data Management Data management can consist of; ► Access management • Client access and maintenance • User permissions • Policies including data security • Policies including data continuance ► Data manipulation utilizing microservices • Data checking • Implementing processes such as reduction and filtering • Data registration and metadata extraction • Data migration 3 ©2012 DataDirect Networks. All Rights Reserved.
  • 3. Sources of Service Latency ► Hardware Chain • Disk drive servo operation • Multiple SCSI layers • Multiple bus transitions • Memory bandwidth limitations • Network service latencies ► Software Chain • Memory copies • Kernel operations • Layers of consecutive operations including the service of V-nodes, I-nodes and FAT • Serial data transport processes 4 ©2012 DataDirect Networks. All Rights Reserved.
  • 4. What is „Embedded Processing‟? And why ? ► Do data intensive processing as „close‟ to the storage as possible. • Bring computing to the data instead of bring data to computing ► HADOOP is an example of this approach. ► Why Embedded Processing? ► Moving data is a lot of work ► A lot of infrastructure needed Client sends a request to storage (red ball) Client But what we really want is : ► So how do we do that? Storage Storage responds with data (blue ball) ©2012 DataDirect Networks. All Rights Reserved.
  • 5. Storage with Virtual Machines 8 x IB QDR/10GbE Host Ports (No Fibre Channel) Interface Virtualization Virtual Virtual Virtual Virtual Machine Machine Machine Machine System memory RAID Processors High-Speed Cache Cache Link Internal SAS Switching ©2012 DataDirect Networks. All Rights Reserved.
  • 6. Repurposing Interface Processors ► In the block based SFA10K platform, the IF processors are responsible for mapping Virtual Disks to LUNs on FC or IB ► In the SFA10KE platform the IF processors are running VMs ► The OS running on those VMs uses a driver to access the RAID processors directly ► RAID processors place data (or use data) directly in the VM‟s memory ► One hop from disk to VM‟s memory ► Now the storage is no longer a block device ► It is a storage appliance with processing capabilities ©2012 DataDirect Networks. All Rights Reserved.
  • 7. Example configuration ► Now we can put iRODS inside the RAID controllers ► The iCAT processor has lots of memory and SSDs for DB storage ► Either use all VMs for iRODS or add a parallel filesystem such as GPFS for fast scratch ► The filesystem uses SAS for frequent used files and SATA for the rest ► The following example is a mix of iRODS with GPFS • This give iRODS the fastest access to the storage because it doesn‟t have to go onto the network to access a fileserver. It lives inside the fileserver. • The same filesystem is also visible from an external compute cluster via GPFS running on the remaining VMs ► This is only one controller, the 4 VMs on the other controller need some work too • They see the same storage and can access it at the same speed. ©2012 DataDirect Networks. All Rights Reserved.
  • 8. Example configuration 8x 10GbE Host Ports Interface Virtualization Virtual Virtual Virtual Virtual Machine Linux Machine Linux Machine Linux Machine Linux iCAT GPFS GPFS GPFS SFA Driver SFA Driver SFA Driver SFA Driver 16 GB 8 GB 8GB 8GB memory memory System memory memory memory allocated allocated allocated allocated RAID Processors High-Speed Cache Cache Link Internal SAS Switching RAID sets RAID sets with RAID sets with with 2TB SSD 300TB SATA 30TB SAS ©2012 DataDirect Networks. All Rights Reserved.
  • 9. Running Micro Services as a VM ► Since iRODS runs inside the controller we now can run iRODS MicroServices right on top of the storage. ► The storage has become an iRODS appliance „speaking‟ iRODS natively. ► iRODS can execute “in-band” operations registering data and extracting metadata during injest. ► We could create „hot‟ directories that kick off processing depending on the type of incoming data. ©2012 DataDirect Networks. All Rights Reserved.
  • 10. Conclusion ► The elimination of software or hardware layers increases reliability and decreases latency. ► Automated, policy based services can be run within a storage environment. ► Policy execution can include data migration, data checking, or data manipulation by calling or scheduling microservices. Data intensive operations executed by a server can cause network traffic and SCSI bus transaction latency. Moving these operations to the storage is efficient and easily managed. 11 ©2012 DataDirect Networks. All Rights Reserved.
  • 11. Questions? DataDirect Networks, Information in Motion, Silicon Storage Appliance, S2A, Storage Fusion Architecture, SFA, Storage Fusion Fabric, Web Object Scaler, WOS, EXAScaler, GRIDScaler, xSTREAMScaler, NAS Scaler, ReAct, ObjectAssure, In-Storage Processing and SATAssure are all trademarks of DataDirect Networks. Any unauthorized use is prohibited. 12 ©2012 DataDirect Networks. All Rights Reserved.