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THEME # 7: CELL
RESPIRATION
LECTURE No. 13
ELECTRON TRANSPORT
CHAIN AND OXIDATIVE
PHOSPHORILATION
1. Electron transport chain (ETC) and oxidative
phosphorylation. Concept and cell location.
2. Organization of ETC. Complexes of ETC.
3. Proton pumps associated to the electronic
transport.
4. Chemiosmotic theory.
5. ATP synthase. Molecular structure and
mechanism of action.
6. Inhibitors of ETC and oxidative
phosphorylation.
7. Uncouplers.
SUMMARY:
BIBLIOGRAPHY
 k. Murray, et al. Harper´s
Biochemistry. 27 th. Ed. Mc Graw
Hill. 2006.
 Lehninger. Principle of Biochemistry,
by David L. Nelson and Michael M.
Cox.5th Ed. 2008.
 Stryer. Biochemistry, by Jeremy M.
Berg, John L. Tymoczko and Lubert
Stryer. 7th Ed. 2007
WAITING ROOM # 1
To your consultation room, was brought by her
friends, a young lady intoxicated with cyanide.
She was working in a chemistry laboratory in
the University.
After physical examination, you diagnosed her
dead.
One of her friends was terrify, and came to
talk with you. She was crying disgracefully and
suddenly she ask you why cyanide killed her
so rapidly.
On the base of your knowledge about cellular
respiration, how can you explain the toxicity of
cyanide?
A very important man came to your house to
visit you. Mohamed, your Mathematics lecturer
in your pre-university school. For you, he is a
symbol of a good lecturer, an excellent person
and a wise man. You love him very much.
He is now 40 year-old and he was diagnosed
as a hyperthyroid. He is very worry because
his heat intolerance with heavy sweating,
heart palpitations, and tremulousness. Over the
past 4 months, he has lost weight in spite of a
good appetite.
WAITING ROOM # 2
He explained you that he was trying to find
information in internet to help him to
understand his symptomatology.
He knew that his heat intolerance is related
with a problem with his central metabolism,
but he did not understood the explanation in
internet.
He remembered you as one of his best
students and came to your house requesting
your help.
On the base of your knowledge about central
metabolism, how can you explain him , the
cause of his heat intolerance?
WAITING ROOM # 2
The discovery in
1948 by Eugene
Kennedy and Albert
Lehninger that
mitochondria are the
site of oxidative
phosphorylation in
eukaryotes marked
the beginning of the
modern phase of
studies in biological
energy transductions.
Albert L. Lehninger,
1917–1986
1) Oxidation of fuels (fat, carbohydrate,
and protein).
2) Conversion of energy from fuel
oxidation into the high-energy phosphate
bonds of ATP.
3) Utilization of ATP phosphate bond
energy to drive energy-requiring
processes.
THESE ENERGY TRANSFORMATIONS
CAN BE DIVIDED INTO THREE
PRINCIPAL PHASES:
ATP PRODUCTION DURING CELULAR
RESPIRATION
In cells, the chemical bond energy of fuels is
transformed into the physiologic responses
necessary for life.
To generate ATP through cellular respiration,
fuels are degraded by oxidative reactions that
transfer most of their chemical bond energy to
NAD+ and FAD to generate the reduced form of
these coenzymes, NADH and FADH2.
When NADH and FADH2 are oxidized by O2 in
the electron transport chain, the energy is used
to regenerate ATP in the process of oxidative
phosphorylation.
THE ATP-ADP CYCLE
THE ATP-ADP CYCLE
CONCEPT ABOUT ELECTRON
TRANSPORT CHAIN
Electron transport chain is a serie
of oxidation-reduction reactions,
throught which the electrons from
NADH and FADH2 are gradually
transported to the final acceptor:
molecular oxygen (O2), which
become oxidized forming H2O.
When NADH and FADH2 are oxidized by O2 in
the electron transport chain, some energy
released is used to regenerate ATP in the
process of oxidative phosphorylation and some
is released as heat.
We need to breathe principally because our
cells require O2 to generate adequate amounts
of ATP from the oxidation of fuels to CO2 .
Cellular respiration uses over
90% of the O2 inhaled for us.
VERY IMPORTANT TO KNOW:
Oxidation-reduction reactions always
involve a pair of chemicals: an electron
donor, which is oxidized, and an electron
acceptor, which is reduced.
During our metabolism, our fuels donate
electrons, and are oxidized, while, NAD+
and FAD accept electrons, and are
reduced.
OXIDATION-REDUCTION REACTIONS
In oxidation reactions, NAD+ accepts two
electrons as an hydride ion to form NADH,
and a proton (H +) is released into the
medium .It is generally used for metabolic
reactions involving oxidation of alcohols and
aldehydes.
In contrast FAD accepts two electrons as
hydrogen atoms, which are donated singly
from separate atoms (e.g., formation of a
double bond or a disulfide).
OXIDATION-REDUCTION REACTIONS
NADH FADH2
“PAYCHECKS”
ATP cash
The reduction potential is an
electrochemical concept. It is also called
the redox potential or oxidation–reduction
potential and is represented by the letter:
E‘0
In oxidative phosphorylation, the
electron-transfer potential of NADH or
FADH2 is converted into the phosphoryl-
transfer potential of ATP.
THE REDUCTION POTENTIAL
A negative reduction potential means that
the oxidized form of a substance has lower
affinity for electrons . A positive reduction
potential means that the oxidized form of a
substance has higher affinity for electrons.
Thus, a strong reducing agent (such as
NADH) is poised to donate electrons and has
a negative reduction potential, whereas a
strong oxidizing agent (such as O2 ) is ready
to accept electrons and has a positive
reduction potential.
MEANING OF THE REDUCTION POTENTIAL
In the electron transport chain, or respiratory
chain, the electrons are transferred from NADH
and FADH2 to a chain of electron carriers.
The electrons flow from the more electronegative
components to the more electropositive
components.
All the components of electron transport chain
(ETC) are located in the inner membrane of
mitochondria.
ORGANIZATION OF ELECTRON
TRANSPORT CHAIN
ORGANIZATION OF ELECTRON
TRANSPORT CHAIN
There are four distinct multi-protein
complexes:
 Complex-I (NADH - CoQ reductase).
 Complex II ( Succinate - CoQ reductase).
 Complex III (CoQH2 – Cytochrome C
reductase).
 Complex IV (Cytochrome C oxidase).
These four complexes are connected by two
mobile carriers:
 CoQ
 Cytochrome C.
ORGANIZATION OF ELECTRON
TRANSPORT CHAIN COMPLEXES
I
Each cytochrome is a protein that contains a bound
heme group similar in structure to the heme group
present in hemoglobin and myoglobin.
Because of differences in the protein component
of the cytochromes and small differences in the
heme structure, each heme has a different
reduction potential.
The following slide shows the general structure of
the three different type of cytochromes found
during the electron transport chain reactions.
CYTOCHROMES
Iron protoporphyrin IX is found in b-type
cytochromes and in hemoglobin and
myoglobin. Heme c is covalently bound to
the protein of cytochrome c through
thioether bonds to two Cys residues. Heme
a, found in the a-type cytochromes, has a
long isoprenoid tail attached to one of the
five-membered rings.
PROSTHETIC GROUPS OF
CYTOCHROMES
Complexes I, II and III have
also iron sulfur proteins (Fe-S).
In iron-sulfur proteins, first
discovered by Helmut Beinert,
the iron is present not in heme
but in association with inorganic
sulfur atoms or with the sulfur
atoms of Cys residues in the
protein, or both.
IRON-SULFUR PROTEINS
All iron-sulfur proteins participate in one-electron
transfers in which one iron atom of the iron-sulfur
cluster is oxidized or reduced.
Helmut Beinert
Ubiquinone (also called coenzyme Q) is a lipid-
soluble benzoquinone with a long isoprenoid side
chain.
Because ubiquinone is both small and
hydrophobic, it is freely diffusible within the
lipid bilayer of the inner mitochondrial
membrane and can shuttle reducing equivalents
between other, less mobile electron carriers in
the membrane.
And because it carries both electrons and
protons, it plays a central role in coupling
electron flow to proton movement.
COENZYME Q
COMPLETE REDUCTION OF UBIQUINONE
REQUIRES TWO ELECTRONS AND TWO
PROTONS
CoQ is the unique component of the electron
transport chain that is not protein bound.
The large hydrophobic side chain of 10
isoprenoid units (50 carbons) confers lipid
solubility, and CoQ is able to diffuse through
the lipids of the inner mitochondrial membrane.
When the oxidized Quinone form accepts a
single electron, it forms a free radical (a
compound with a single electron in an orbital).
COENZYME Q AND GENERATION OF TOXIC
OXYGEN FREE RADICALS
The transfer of single electrons makes it the
major site for generation of toxic oxygen
free radicals in the body.
FORMATION OF FREE RADICALS DURING
OXIDATION AND REDUCTION REACTIONS
OF CoQ
It is also called NADH-CoQ
reductase, NADH
dehydrogenase complex or
NADH:ubiquinone oxido-
reductase complex. It is tightly
bound to the inner mitochondrial
membrane.
ETC Complex-I
It contains a flavoprotein consisting of FMN as
prosthetic group and an iron-sulphur protein
(Fe-S).
NADH is the donor of electrons, FMN accepts
them and gets reduced to FMNH2 Two electrons
and one hydrogen ion are transferred from
NADH to the flavin prosthetic group of the
enzyme.
NADH + H+ + FMN → FMNH2 + NAD+
The electrons from FMNH2 are then
transferred to Fe-S center and subsequently
transferred to coenzyme Q (ubiquinone or CoQ).
ETC Complex-I
The electrons from FADH2 enter the ETC at the
level of coenzyme Q. This step does not liberate
enough energy to act as proton pump. In other
words, substrates oxidized by FAD-linked
enzymes bypass complex-I.
The three major enzyme systems that transfer
their electrons directly to ubiquinone from the
FAD prosthetic group are:
COMPLEX II OR SUCCINATE-CoQ-REDUCTASE
 Succinate dehydrogenase,
 Fatty acyl CoA
dehydrogenase
 Mitochondrial glycerol
phosphate dehydrogenase.
FLOW OF ELECTRONS THROUGHT COMPLEX II
This is a cluster of iron-sulfur center proteins, cytochrome
b and cytochrome C1, both containing heme prosthetic
group.
REACTION SEQUENCE OF COMPLEX III
( CoQH2 – Cytochrome C reductase)
It contains different proteins, including cytochrome a and
cytochrome a3. The Complex IV is tightly bound to the
mitochondrial membrane.
REACTION SEQUENCE OF COMPLEX IV
(Cytochrome C oxidase)
Oxidative phosphorylation is the process
by which, the energy released by the
oxidation reactions of the electron
transport chain is used to synthesize
adenosine triphosphate (ATP) by the
action of complex V (ATP synthase, or
also called F0F1ATPase).
CONCEPT OF
OXIDATIVE PHOSPHORYLATION (OP)
Oxidative phosphorylation is the
culmination of energy-yielding
metabolism in aerobic organisms.
All oxidative steps in the degradation
of carbohydrates, fats and amino
acids, converge at this final stage of
cellular respiration, in which the
energy of oxidation drives the
synthesis of ATP.
OXIDATIVE PHOSPHORYLATION
Peter Mitchell was
awarded with the
Nobel Price in
Chemistry in 1978 for
his contribution to
the underestanding of
biological energy
transfer during ATP
synthesis, through
the formulation of
the Chemiosmotic
theory.
POSTULATES OF CHEMIOSMOTIC
THEORY
The inner mitochondrial membrane is
impermeable for hydrogen protons
(H+)
The complexes I , III and IV of the
electron transport chain , at the
same time that they transfer
electrons to the final aceptor, O2 ,
they pump H+ from the mitochondrial
matrix to the intermembrane space.
As consequence of this pumping function is
formed an electrochemical gradient in both sides
of the inner mitocondrial membrane.
The intermembrane side of the inner mitocondrial
membrane remain positivelly charged, while, the
mitocondrial matrix side is becoming negativelly
charged. Also the pH will be lower in the
intermembrane space (because high H+
concentration ) in relation with the pH inside
mitochondrila matrix (because lower H+
concentration ).This elcectrochemical gradient is
also called, proton motive force.
POSTULATES OF CHEMIOSMOTIC
THEORY
FORMATION OF THE
ELECTROCHEMICAL GRADIENT
The proton motive force the re-entry of the
Hydrogen protons to the mitochondrial matrix,
using the H+ proton channel of F0 subunit of
complex V or ATP synthase.
ATP is then synthesized by the catalytic
subunit of ATP synthase complex (F1 subunit ),
from ADP and Pi using the energy released
during the disipation of the electrochemical
gradient between both sides of the inner
mitocondrial membrane.
POSTULATES OF CHEMIOSMOTIC
THEORY
POSTULATES OF CHEMIOSMOTIC
THEORY
Electron transport chain and
oxidative phosphorylation are
coupled processes, by the formation
of the electrochemical gradient
between both sides of the inner
mitochondrail membrane.
ETC and OP are coupled by the formation of an
electrochemical gradient between both sides of the inner
mitochondrial membrane(CHEMIOSMOTIC MODEL)
The H+ pumping activity of complexes I, III and IV of
ETC, generates an electrochemical gradient. Complex V
(ATP synthase) catalyze ATP synthesis using the energy
released during disipation of the gradient.
ATP synthase (F0F1 ATPase),, is a multisubunit
enzyme containing a transmembrane portion (F0) and
a stalk and headpiece (F1 ) that project into the
matrix .
The 12 c subunits of the F0 subunit form a rotor
that is attached to a central asymmetric shaft
composed of the Ɛ and ɣ subunits. The headpiece
(F1 subunit) is composed of three αβ subunit pairs.
Each β subunit contains a catalytic site for ATP
synthesis. The headpiece is held stationary by a δ
subunit attached to a long b subunits connected to
subunit a in the membrane.
ATP SYNTHASE STRUCTURE
F 1 , the first
factor recognized
as essential for
oxidative
phosphorylation,
was identified and
purified by Efraim
Racker and his
colleagues in the
early 1960s.
The
crystallographic
determination of
the F 1 structure
by John E. Walker
and colleagues
revealed structural
details very helpful
in explaining the
catalytic
mechanism
of the enzyme.
The influx of protons through the proton channel
turns the rotor. The proton channel is formed by
the c subunits on one side and the a subunit on
the other side.
Although continuous, it has two offset portions,
one portion directly open to the intermembrane
space and one portion directly open to the
matrix. In the current model, each c subunit
contains a glutamyl carboxyl group that extends
into the proton channel. As this carboxyl group
accepts a proton from the intermembrane space,
the c subunit rotates into the hydrophobic lipid
membrane.
MECHANISM OF ACTION OF ATP SYNTHASE
The rotation exposes a different proton-
containing c subunit to the portion of the channel
directly open to the matrix side.
Because the matrix has a lower proton
concentration, the glutamyl carboxylic acid group
releases a proton into the matrix portion of the
channel.
Rotation is completed by an attraction between
the negatively charged glutamyl residue in the c
subunit and a positively charged arginyl group
on the a subunit.
MECHANISM OF ACTION OF ATP SYNTHASE
Each proton enters
the cytoplasmic
half-channel,
follows a complete
rotation of the c
ring, and exits
through the
other half-channel
into the matrix.
PROTON PATH THROUGH THE MEMBRANE
PROTON MOTION ACROSS THE MEMBRANE
DRIVES ROTATION OF THE C RING
According to the binding change mechanism, as the
asymmetric shaft rotates to a new position, it
forms different binding associations with the αβ
subunits.
The new position of the shaft alters the
conformation of one β subunit so that it releases a
molecule of ATP and another subunit
spontaneously catalyzes synthesis of ATP from
inorganic phosphate, one proton, and ADP.
Thus, energy from the electrochemical gradient is
used to change the conformation of the ATP
synthase subunits so that the newly synthesized
ATP is released.
MECHANISM OF ACTION OF ATP SYNTHASE
Conformational changes of ATP synthase
subunits during ATP synthesis
THERMOGENESIS
Thermogenesis refers to energy
expended for the purpose of
generating heat in addition to that
expended for ATP production.
To maintain our body at 37ºC,
despite changes in environmental
temperature, it is necessary to
regulate fuel oxidation and its
efficiency (as well as heat
dissipation).
In shivering thermogenesis, we respond to
sudden cold with asynchronous muscle
contractions (shivers) that increase ATP
utilization and, therefore, fuel oxidation
and the release of energy as heat.
In nonshivering thermogenesis (adaptive
thermogenesis), the efficiency of
converting energy from fuel oxidation into
ATP is decreased. More fuel needs to be
oxidized to maintain constant ATP levels
and, thus, more heat is generated.
THERMOGENESIS
Most of the newly synthesized ATP that is
released into the mitochondrial matrix must be
transported out of the mitochondria, where it is
used for energy-requiring processes such as
active ion transport, muscle contraction, or
biosynthetic reactions.
Likewise, ADP, phosphate, pyruvate, and other
metabolites must be transported into the
matrix. This requires transport mechanism of
compounds through mitochondrial membranes.
TRANSPORT THROUGH INNER AND OUTER
MITOCHONDRIAL MEMBRANES
ADENINE
NUCLEOTIDE
AND
PHOSPHATE
TRANSLOCASES
IN
MITOCHONDRIAL
MEMBRANE
+
MECHANISM OF MITOCHONDRIAL ATP-ADP
TRANSLOCASE
SHUTTLE SYSTEMS INDIRECTLY
CONVEY CYTOSOLIC NADH INTO
MITOCHONDRIA FOR OXIDATION
The NADH dehydrogenase of the inner
mitochondrial membrane of animal cells can
accept electrons only from NADH in the matrix.
Given that the inner membrane is not permeable
to NADH, how can the NADH generated by
glycolysis in the cytosol be reoxidized to NAD+ by
O2 via the respiratory chain?
Special shuttle systems carry reducing
equivalents from cytosolic NADH into
mitochondria by an indirect route.
NADH and FADH2 from the Krebs cycle and β-
oxidation reactions in mitochondrial matrix are
directly reoxidized by complexes I and II
respectively.
Malate-aspartate shuttle is the most active NADH
shuttle, which functions in liver, kidney, and heart
mitochondria.
The reducing equivalents of cytosolic NADH are first
transferred to cytosolic oxaloacetate to yield malate,
catalyzed by cytosolic malate dehydrogenase. The malate
thus formed passes through the inner membrane via the
malate–α-ketoglutarate transporter.
Within the matrix the reducing equivalents are passed to
NAD+ by the action of matrix malate dehydrogenase,
forming NADH; this NADH can pass electrons directly to
the respiratory chain. About 2.5 molecules of ATP are
generated as this pair of electrons passes to O2.
Cytosolic oxaloacetate must be regenerated by
transamination reactions and the activity of membrane
transporters to start another cycle of the shuttle.
MALATE-ASPARTATE SHUTTLE
Skeletal muscle and brain use a
different NADH
shuttle, the glycerol 3-phosphate.
It differs from the malate-aspartate
shuttle in that it delivers the reducing
equivalents from NADH to ubiquinone
and thus into Complex II, not Complex I,
providing only enough energy to
synthesize 1.5 ATP molecules per pair of
electrons.
GLYCEROL 3-PHOSPHATE
SHUTTLE
INHIBITORS OF ELECTRON TRANSPORT
CHAIN
INHIBITORS OF ELECTRON TRANSPORT
CHAIN
EFFECT OF ELECTRON CHAIN
INHIBITORS
After bind to some component of any complex,
electron chain inhibitors:
Stop substrate oxidation.
Stop the electron transport.
Stop H+ pumping.
No electrochemical gradient is formed.
 Stop Oxygen consumption.
 Stop H2O production.
Stop ATP synthesis.
 Oligomycin: Inhibits Fo
 Aurovertine: Inhibits F1
 Valinomycin: K⁺ Ionophore
 Atractyloside: Inhibits Translocase
Oxidative
Phosphorilation
Inhibitors
Bind to F1 or Fo fractions of ATP
synthase.
Stop ATP synthesis
Proton motive force gets a
maximum level
As consequence, electron transport
chain stop working.
EFFECT OF OXIDATION
PHOSPHORYLATION
INHIBITORS
ETCand OP are coupled by the formation of an
electrochemical gradient between both sides of the inner
mitochondrial membrane(CHEMIOSMOTIC MODEL)
The electrochemical gradient is formed beause
complexes I, III and IV, pump hydrogen
protons from mitocondrial matrix to the
intermembrane space. These H+ can not enter
back, because, the inner mitocondrial
membrane is not permeable for them .
REMEMBERING:
What would happen if hydrogen protons
pumped by ETC complexes can freely cross or,
are transported back to the mitochondrial
matrix?
TO THINK:
When protons leak back into the matrix without
going through the ATP synthase pore, they
dissipate the electrochemical gradient across the
membrane without generating ATP.
This phenomenon is called “uncoupling” oxidative
phosphorylation.
It occurs with chemical transporters, known as
uncouplers, and it occurs physiologically with
uncoupling proteins that form proton
conductance channels through the membrane.
UNCOUPLING ATP SYNTHESIS FROM
ELECTRON TRANSPORT
Chemical uncouplers, also known as proton ionophores, are
lipid-soluble compounds that rapidly transport protons
from the cytosolic to the matrix side across the inner
mitochondrial membrane.
Because the proton concentration is higher in the
intermembrane space than in the matrix, uncouplers pick
up protons from the intermembrane space. Their lipid
solubility enables them to diffuse through the inner
mitochondrial membrane while carrying protons and release
these protons on the matrix side.
The rapid influx of protons dissipates the electrochemical
potential gradient; therefore, the mitochondria are unable
to synthesize ATP.
CHEMICAL UNCOUPLERS OF
OXIDATIVE PHOSPHORYLATION
UNCOUPLING PROTEINS AND
THERMOGENESIS
Uncoupling proteins (UCPs) form channels through
the inner mitochondrial membrane that are able to
conduct protons from the intermembrane space to
the matrix, thereby short-circuiting ATP synthase.
UCP1 (thermogenin) is associated with heat
production in brown adipose tissue. The major
function of brown adipose tissue is nonshivering
thermogenesis, whereas the major function of
white adipose tissue is the storage of
triacylglycerols in white lipid droplets. The brown
color arises from the large number of
mitochondria that participate.
UNCOUPLING PROTEINS
BROWN FAT IS VERY IMPORTANT IN
HIBERNATING ANIMALS
Uncouple Electron Transport
and Oxidative Phosphorylation.
Destroy Proton motive force.
 Stop ATP synthesis.
 Activate ETC reactions.
Increase the lost of energy as heat.
EFFECT OF UNCOUPLERS
WAITING ROOM # 1
To your consultation room, was brought by her
friends, a young lady intoxicated with cyanide.
She was working in a chemistry laboratory in
the University.
After physical examination you diagnosed her
dead.
One of her friends was terrify, and came to
talk with you. She was crying disgracefully and
suddenly she ask you why cyanide killed her
so rapidly.
On the base of your knowledge about cellular
respiration, how can you explain the toxicity of
cyanide?
A very important man came to your house to
visit you. Mohamed, your Mathematics lecturer
in your pre-university school. For you, he is a
symbol of a good lecturer, an excellent person
and a wise man. You love him very much.
He is now 40 year-old and he was diagnostic
as a hyperthyroid. He is very worry because
his heat intolerance with heavy sweating,
heart palpitations, and tremulousness. Over the
past 4 months, he has lost weight in spite of a
good appetite.
WAITING ROOM # 2
He explained you that he was trying to find
information in internet to help him to
understand his symptomatology.
He knew that his heat intolerance is related
with a problem with his central metabolism,
but he did not understand the explanation in
internet.
He remembered you, as one of his best
students and came to your house requesting
your help.
On the base of your knowledge about central
metabolism, how can you explain him , the
cause of his heat intolerance?
WAITING ROOM # 2
Thyroid hormones increase the synthesis and
as consequence the level of UCP2 and UCP3 in
the inner mitochondrial membrane.
UCP2 and UCP3 (termogenines) are channels
that propitiate the reenter of hydrogen
protons to mitochondrial matrix.
Electrochemical gradient is destroy. ATP
production decreases and the ETC is
enhanced.
As a consequence of the increased rate of the
electron transport chain, most released energy
is lost as heat, this is because
hyperthyroidism results in increased heat
intolerance.
WAITING ROOM # 2
ELECTRON TRANSPORT CHAIN AND OXIDATIVE PHOSPHORYLATION.ppt

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ELECTRON TRANSPORT CHAIN AND OXIDATIVE PHOSPHORYLATION.ppt

  • 1. THEME # 7: CELL RESPIRATION LECTURE No. 13 ELECTRON TRANSPORT CHAIN AND OXIDATIVE PHOSPHORILATION
  • 2. 1. Electron transport chain (ETC) and oxidative phosphorylation. Concept and cell location. 2. Organization of ETC. Complexes of ETC. 3. Proton pumps associated to the electronic transport. 4. Chemiosmotic theory. 5. ATP synthase. Molecular structure and mechanism of action. 6. Inhibitors of ETC and oxidative phosphorylation. 7. Uncouplers. SUMMARY:
  • 3. BIBLIOGRAPHY  k. Murray, et al. Harper´s Biochemistry. 27 th. Ed. Mc Graw Hill. 2006.  Lehninger. Principle of Biochemistry, by David L. Nelson and Michael M. Cox.5th Ed. 2008.  Stryer. Biochemistry, by Jeremy M. Berg, John L. Tymoczko and Lubert Stryer. 7th Ed. 2007
  • 4. WAITING ROOM # 1 To your consultation room, was brought by her friends, a young lady intoxicated with cyanide. She was working in a chemistry laboratory in the University. After physical examination, you diagnosed her dead. One of her friends was terrify, and came to talk with you. She was crying disgracefully and suddenly she ask you why cyanide killed her so rapidly. On the base of your knowledge about cellular respiration, how can you explain the toxicity of cyanide?
  • 5. A very important man came to your house to visit you. Mohamed, your Mathematics lecturer in your pre-university school. For you, he is a symbol of a good lecturer, an excellent person and a wise man. You love him very much. He is now 40 year-old and he was diagnosed as a hyperthyroid. He is very worry because his heat intolerance with heavy sweating, heart palpitations, and tremulousness. Over the past 4 months, he has lost weight in spite of a good appetite. WAITING ROOM # 2
  • 6. He explained you that he was trying to find information in internet to help him to understand his symptomatology. He knew that his heat intolerance is related with a problem with his central metabolism, but he did not understood the explanation in internet. He remembered you as one of his best students and came to your house requesting your help. On the base of your knowledge about central metabolism, how can you explain him , the cause of his heat intolerance? WAITING ROOM # 2
  • 7.
  • 8. The discovery in 1948 by Eugene Kennedy and Albert Lehninger that mitochondria are the site of oxidative phosphorylation in eukaryotes marked the beginning of the modern phase of studies in biological energy transductions. Albert L. Lehninger, 1917–1986
  • 9.
  • 10. 1) Oxidation of fuels (fat, carbohydrate, and protein). 2) Conversion of energy from fuel oxidation into the high-energy phosphate bonds of ATP. 3) Utilization of ATP phosphate bond energy to drive energy-requiring processes. THESE ENERGY TRANSFORMATIONS CAN BE DIVIDED INTO THREE PRINCIPAL PHASES:
  • 11.
  • 12. ATP PRODUCTION DURING CELULAR RESPIRATION
  • 13. In cells, the chemical bond energy of fuels is transformed into the physiologic responses necessary for life. To generate ATP through cellular respiration, fuels are degraded by oxidative reactions that transfer most of their chemical bond energy to NAD+ and FAD to generate the reduced form of these coenzymes, NADH and FADH2. When NADH and FADH2 are oxidized by O2 in the electron transport chain, the energy is used to regenerate ATP in the process of oxidative phosphorylation. THE ATP-ADP CYCLE
  • 15. CONCEPT ABOUT ELECTRON TRANSPORT CHAIN Electron transport chain is a serie of oxidation-reduction reactions, throught which the electrons from NADH and FADH2 are gradually transported to the final acceptor: molecular oxygen (O2), which become oxidized forming H2O.
  • 16. When NADH and FADH2 are oxidized by O2 in the electron transport chain, some energy released is used to regenerate ATP in the process of oxidative phosphorylation and some is released as heat. We need to breathe principally because our cells require O2 to generate adequate amounts of ATP from the oxidation of fuels to CO2 . Cellular respiration uses over 90% of the O2 inhaled for us. VERY IMPORTANT TO KNOW:
  • 17. Oxidation-reduction reactions always involve a pair of chemicals: an electron donor, which is oxidized, and an electron acceptor, which is reduced. During our metabolism, our fuels donate electrons, and are oxidized, while, NAD+ and FAD accept electrons, and are reduced. OXIDATION-REDUCTION REACTIONS
  • 18. In oxidation reactions, NAD+ accepts two electrons as an hydride ion to form NADH, and a proton (H +) is released into the medium .It is generally used for metabolic reactions involving oxidation of alcohols and aldehydes. In contrast FAD accepts two electrons as hydrogen atoms, which are donated singly from separate atoms (e.g., formation of a double bond or a disulfide). OXIDATION-REDUCTION REACTIONS
  • 19.
  • 22. The reduction potential is an electrochemical concept. It is also called the redox potential or oxidation–reduction potential and is represented by the letter: E‘0 In oxidative phosphorylation, the electron-transfer potential of NADH or FADH2 is converted into the phosphoryl- transfer potential of ATP. THE REDUCTION POTENTIAL
  • 23. A negative reduction potential means that the oxidized form of a substance has lower affinity for electrons . A positive reduction potential means that the oxidized form of a substance has higher affinity for electrons. Thus, a strong reducing agent (such as NADH) is poised to donate electrons and has a negative reduction potential, whereas a strong oxidizing agent (such as O2 ) is ready to accept electrons and has a positive reduction potential. MEANING OF THE REDUCTION POTENTIAL
  • 24. In the electron transport chain, or respiratory chain, the electrons are transferred from NADH and FADH2 to a chain of electron carriers. The electrons flow from the more electronegative components to the more electropositive components. All the components of electron transport chain (ETC) are located in the inner membrane of mitochondria. ORGANIZATION OF ELECTRON TRANSPORT CHAIN
  • 25. ORGANIZATION OF ELECTRON TRANSPORT CHAIN There are four distinct multi-protein complexes:  Complex-I (NADH - CoQ reductase).  Complex II ( Succinate - CoQ reductase).  Complex III (CoQH2 – Cytochrome C reductase).  Complex IV (Cytochrome C oxidase). These four complexes are connected by two mobile carriers:  CoQ  Cytochrome C.
  • 27. I
  • 28. Each cytochrome is a protein that contains a bound heme group similar in structure to the heme group present in hemoglobin and myoglobin. Because of differences in the protein component of the cytochromes and small differences in the heme structure, each heme has a different reduction potential. The following slide shows the general structure of the three different type of cytochromes found during the electron transport chain reactions. CYTOCHROMES
  • 29. Iron protoporphyrin IX is found in b-type cytochromes and in hemoglobin and myoglobin. Heme c is covalently bound to the protein of cytochrome c through thioether bonds to two Cys residues. Heme a, found in the a-type cytochromes, has a long isoprenoid tail attached to one of the five-membered rings. PROSTHETIC GROUPS OF CYTOCHROMES
  • 30. Complexes I, II and III have also iron sulfur proteins (Fe-S). In iron-sulfur proteins, first discovered by Helmut Beinert, the iron is present not in heme but in association with inorganic sulfur atoms or with the sulfur atoms of Cys residues in the protein, or both. IRON-SULFUR PROTEINS All iron-sulfur proteins participate in one-electron transfers in which one iron atom of the iron-sulfur cluster is oxidized or reduced. Helmut Beinert
  • 31.
  • 32. Ubiquinone (also called coenzyme Q) is a lipid- soluble benzoquinone with a long isoprenoid side chain. Because ubiquinone is both small and hydrophobic, it is freely diffusible within the lipid bilayer of the inner mitochondrial membrane and can shuttle reducing equivalents between other, less mobile electron carriers in the membrane. And because it carries both electrons and protons, it plays a central role in coupling electron flow to proton movement. COENZYME Q
  • 33. COMPLETE REDUCTION OF UBIQUINONE REQUIRES TWO ELECTRONS AND TWO PROTONS
  • 34. CoQ is the unique component of the electron transport chain that is not protein bound. The large hydrophobic side chain of 10 isoprenoid units (50 carbons) confers lipid solubility, and CoQ is able to diffuse through the lipids of the inner mitochondrial membrane. When the oxidized Quinone form accepts a single electron, it forms a free radical (a compound with a single electron in an orbital). COENZYME Q AND GENERATION OF TOXIC OXYGEN FREE RADICALS The transfer of single electrons makes it the major site for generation of toxic oxygen free radicals in the body.
  • 35. FORMATION OF FREE RADICALS DURING OXIDATION AND REDUCTION REACTIONS OF CoQ
  • 36.
  • 37. It is also called NADH-CoQ reductase, NADH dehydrogenase complex or NADH:ubiquinone oxido- reductase complex. It is tightly bound to the inner mitochondrial membrane. ETC Complex-I
  • 38. It contains a flavoprotein consisting of FMN as prosthetic group and an iron-sulphur protein (Fe-S). NADH is the donor of electrons, FMN accepts them and gets reduced to FMNH2 Two electrons and one hydrogen ion are transferred from NADH to the flavin prosthetic group of the enzyme. NADH + H+ + FMN → FMNH2 + NAD+ The electrons from FMNH2 are then transferred to Fe-S center and subsequently transferred to coenzyme Q (ubiquinone or CoQ). ETC Complex-I
  • 39.
  • 40. The electrons from FADH2 enter the ETC at the level of coenzyme Q. This step does not liberate enough energy to act as proton pump. In other words, substrates oxidized by FAD-linked enzymes bypass complex-I. The three major enzyme systems that transfer their electrons directly to ubiquinone from the FAD prosthetic group are: COMPLEX II OR SUCCINATE-CoQ-REDUCTASE  Succinate dehydrogenase,  Fatty acyl CoA dehydrogenase  Mitochondrial glycerol phosphate dehydrogenase.
  • 41. FLOW OF ELECTRONS THROUGHT COMPLEX II
  • 42. This is a cluster of iron-sulfur center proteins, cytochrome b and cytochrome C1, both containing heme prosthetic group. REACTION SEQUENCE OF COMPLEX III ( CoQH2 – Cytochrome C reductase)
  • 43. It contains different proteins, including cytochrome a and cytochrome a3. The Complex IV is tightly bound to the mitochondrial membrane. REACTION SEQUENCE OF COMPLEX IV (Cytochrome C oxidase)
  • 44.
  • 45.
  • 46.
  • 47. Oxidative phosphorylation is the process by which, the energy released by the oxidation reactions of the electron transport chain is used to synthesize adenosine triphosphate (ATP) by the action of complex V (ATP synthase, or also called F0F1ATPase). CONCEPT OF OXIDATIVE PHOSPHORYLATION (OP)
  • 48. Oxidative phosphorylation is the culmination of energy-yielding metabolism in aerobic organisms. All oxidative steps in the degradation of carbohydrates, fats and amino acids, converge at this final stage of cellular respiration, in which the energy of oxidation drives the synthesis of ATP. OXIDATIVE PHOSPHORYLATION
  • 49.
  • 50.
  • 51. Peter Mitchell was awarded with the Nobel Price in Chemistry in 1978 for his contribution to the underestanding of biological energy transfer during ATP synthesis, through the formulation of the Chemiosmotic theory.
  • 52. POSTULATES OF CHEMIOSMOTIC THEORY The inner mitochondrial membrane is impermeable for hydrogen protons (H+) The complexes I , III and IV of the electron transport chain , at the same time that they transfer electrons to the final aceptor, O2 , they pump H+ from the mitochondrial matrix to the intermembrane space.
  • 53. As consequence of this pumping function is formed an electrochemical gradient in both sides of the inner mitocondrial membrane. The intermembrane side of the inner mitocondrial membrane remain positivelly charged, while, the mitocondrial matrix side is becoming negativelly charged. Also the pH will be lower in the intermembrane space (because high H+ concentration ) in relation with the pH inside mitochondrila matrix (because lower H+ concentration ).This elcectrochemical gradient is also called, proton motive force. POSTULATES OF CHEMIOSMOTIC THEORY
  • 55. The proton motive force the re-entry of the Hydrogen protons to the mitochondrial matrix, using the H+ proton channel of F0 subunit of complex V or ATP synthase. ATP is then synthesized by the catalytic subunit of ATP synthase complex (F1 subunit ), from ADP and Pi using the energy released during the disipation of the electrochemical gradient between both sides of the inner mitocondrial membrane. POSTULATES OF CHEMIOSMOTIC THEORY
  • 56. POSTULATES OF CHEMIOSMOTIC THEORY Electron transport chain and oxidative phosphorylation are coupled processes, by the formation of the electrochemical gradient between both sides of the inner mitochondrail membrane.
  • 57. ETC and OP are coupled by the formation of an electrochemical gradient between both sides of the inner mitochondrial membrane(CHEMIOSMOTIC MODEL)
  • 58. The H+ pumping activity of complexes I, III and IV of ETC, generates an electrochemical gradient. Complex V (ATP synthase) catalyze ATP synthesis using the energy released during disipation of the gradient.
  • 59. ATP synthase (F0F1 ATPase),, is a multisubunit enzyme containing a transmembrane portion (F0) and a stalk and headpiece (F1 ) that project into the matrix . The 12 c subunits of the F0 subunit form a rotor that is attached to a central asymmetric shaft composed of the Ɛ and ɣ subunits. The headpiece (F1 subunit) is composed of three αβ subunit pairs. Each β subunit contains a catalytic site for ATP synthesis. The headpiece is held stationary by a δ subunit attached to a long b subunits connected to subunit a in the membrane. ATP SYNTHASE STRUCTURE
  • 60.
  • 61. F 1 , the first factor recognized as essential for oxidative phosphorylation, was identified and purified by Efraim Racker and his colleagues in the early 1960s.
  • 62. The crystallographic determination of the F 1 structure by John E. Walker and colleagues revealed structural details very helpful in explaining the catalytic mechanism of the enzyme.
  • 63. The influx of protons through the proton channel turns the rotor. The proton channel is formed by the c subunits on one side and the a subunit on the other side. Although continuous, it has two offset portions, one portion directly open to the intermembrane space and one portion directly open to the matrix. In the current model, each c subunit contains a glutamyl carboxyl group that extends into the proton channel. As this carboxyl group accepts a proton from the intermembrane space, the c subunit rotates into the hydrophobic lipid membrane. MECHANISM OF ACTION OF ATP SYNTHASE
  • 64. The rotation exposes a different proton- containing c subunit to the portion of the channel directly open to the matrix side. Because the matrix has a lower proton concentration, the glutamyl carboxylic acid group releases a proton into the matrix portion of the channel. Rotation is completed by an attraction between the negatively charged glutamyl residue in the c subunit and a positively charged arginyl group on the a subunit. MECHANISM OF ACTION OF ATP SYNTHASE
  • 65. Each proton enters the cytoplasmic half-channel, follows a complete rotation of the c ring, and exits through the other half-channel into the matrix. PROTON PATH THROUGH THE MEMBRANE
  • 66. PROTON MOTION ACROSS THE MEMBRANE DRIVES ROTATION OF THE C RING
  • 67. According to the binding change mechanism, as the asymmetric shaft rotates to a new position, it forms different binding associations with the αβ subunits. The new position of the shaft alters the conformation of one β subunit so that it releases a molecule of ATP and another subunit spontaneously catalyzes synthesis of ATP from inorganic phosphate, one proton, and ADP. Thus, energy from the electrochemical gradient is used to change the conformation of the ATP synthase subunits so that the newly synthesized ATP is released. MECHANISM OF ACTION OF ATP SYNTHASE
  • 68. Conformational changes of ATP synthase subunits during ATP synthesis
  • 69.
  • 70. THERMOGENESIS Thermogenesis refers to energy expended for the purpose of generating heat in addition to that expended for ATP production. To maintain our body at 37ºC, despite changes in environmental temperature, it is necessary to regulate fuel oxidation and its efficiency (as well as heat dissipation).
  • 71. In shivering thermogenesis, we respond to sudden cold with asynchronous muscle contractions (shivers) that increase ATP utilization and, therefore, fuel oxidation and the release of energy as heat. In nonshivering thermogenesis (adaptive thermogenesis), the efficiency of converting energy from fuel oxidation into ATP is decreased. More fuel needs to be oxidized to maintain constant ATP levels and, thus, more heat is generated. THERMOGENESIS
  • 72. Most of the newly synthesized ATP that is released into the mitochondrial matrix must be transported out of the mitochondria, where it is used for energy-requiring processes such as active ion transport, muscle contraction, or biosynthetic reactions. Likewise, ADP, phosphate, pyruvate, and other metabolites must be transported into the matrix. This requires transport mechanism of compounds through mitochondrial membranes. TRANSPORT THROUGH INNER AND OUTER MITOCHONDRIAL MEMBRANES
  • 74. MECHANISM OF MITOCHONDRIAL ATP-ADP TRANSLOCASE
  • 75. SHUTTLE SYSTEMS INDIRECTLY CONVEY CYTOSOLIC NADH INTO MITOCHONDRIA FOR OXIDATION The NADH dehydrogenase of the inner mitochondrial membrane of animal cells can accept electrons only from NADH in the matrix. Given that the inner membrane is not permeable to NADH, how can the NADH generated by glycolysis in the cytosol be reoxidized to NAD+ by O2 via the respiratory chain? Special shuttle systems carry reducing equivalents from cytosolic NADH into mitochondria by an indirect route.
  • 76. NADH and FADH2 from the Krebs cycle and β- oxidation reactions in mitochondrial matrix are directly reoxidized by complexes I and II respectively.
  • 77.
  • 78. Malate-aspartate shuttle is the most active NADH shuttle, which functions in liver, kidney, and heart mitochondria. The reducing equivalents of cytosolic NADH are first transferred to cytosolic oxaloacetate to yield malate, catalyzed by cytosolic malate dehydrogenase. The malate thus formed passes through the inner membrane via the malate–α-ketoglutarate transporter. Within the matrix the reducing equivalents are passed to NAD+ by the action of matrix malate dehydrogenase, forming NADH; this NADH can pass electrons directly to the respiratory chain. About 2.5 molecules of ATP are generated as this pair of electrons passes to O2. Cytosolic oxaloacetate must be regenerated by transamination reactions and the activity of membrane transporters to start another cycle of the shuttle. MALATE-ASPARTATE SHUTTLE
  • 79.
  • 80. Skeletal muscle and brain use a different NADH shuttle, the glycerol 3-phosphate. It differs from the malate-aspartate shuttle in that it delivers the reducing equivalents from NADH to ubiquinone and thus into Complex II, not Complex I, providing only enough energy to synthesize 1.5 ATP molecules per pair of electrons. GLYCEROL 3-PHOSPHATE SHUTTLE
  • 81.
  • 82.
  • 83. INHIBITORS OF ELECTRON TRANSPORT CHAIN
  • 84. INHIBITORS OF ELECTRON TRANSPORT CHAIN
  • 85. EFFECT OF ELECTRON CHAIN INHIBITORS After bind to some component of any complex, electron chain inhibitors: Stop substrate oxidation. Stop the electron transport. Stop H+ pumping. No electrochemical gradient is formed.  Stop Oxygen consumption.  Stop H2O production. Stop ATP synthesis.
  • 86.  Oligomycin: Inhibits Fo  Aurovertine: Inhibits F1  Valinomycin: K⁺ Ionophore  Atractyloside: Inhibits Translocase Oxidative Phosphorilation Inhibitors
  • 87. Bind to F1 or Fo fractions of ATP synthase. Stop ATP synthesis Proton motive force gets a maximum level As consequence, electron transport chain stop working. EFFECT OF OXIDATION PHOSPHORYLATION INHIBITORS
  • 88.
  • 89. ETCand OP are coupled by the formation of an electrochemical gradient between both sides of the inner mitochondrial membrane(CHEMIOSMOTIC MODEL)
  • 90. The electrochemical gradient is formed beause complexes I, III and IV, pump hydrogen protons from mitocondrial matrix to the intermembrane space. These H+ can not enter back, because, the inner mitocondrial membrane is not permeable for them . REMEMBERING: What would happen if hydrogen protons pumped by ETC complexes can freely cross or, are transported back to the mitochondrial matrix? TO THINK:
  • 91.
  • 92. When protons leak back into the matrix without going through the ATP synthase pore, they dissipate the electrochemical gradient across the membrane without generating ATP. This phenomenon is called “uncoupling” oxidative phosphorylation. It occurs with chemical transporters, known as uncouplers, and it occurs physiologically with uncoupling proteins that form proton conductance channels through the membrane. UNCOUPLING ATP SYNTHESIS FROM ELECTRON TRANSPORT
  • 93. Chemical uncouplers, also known as proton ionophores, are lipid-soluble compounds that rapidly transport protons from the cytosolic to the matrix side across the inner mitochondrial membrane. Because the proton concentration is higher in the intermembrane space than in the matrix, uncouplers pick up protons from the intermembrane space. Their lipid solubility enables them to diffuse through the inner mitochondrial membrane while carrying protons and release these protons on the matrix side. The rapid influx of protons dissipates the electrochemical potential gradient; therefore, the mitochondria are unable to synthesize ATP. CHEMICAL UNCOUPLERS OF OXIDATIVE PHOSPHORYLATION
  • 94.
  • 95. UNCOUPLING PROTEINS AND THERMOGENESIS Uncoupling proteins (UCPs) form channels through the inner mitochondrial membrane that are able to conduct protons from the intermembrane space to the matrix, thereby short-circuiting ATP synthase. UCP1 (thermogenin) is associated with heat production in brown adipose tissue. The major function of brown adipose tissue is nonshivering thermogenesis, whereas the major function of white adipose tissue is the storage of triacylglycerols in white lipid droplets. The brown color arises from the large number of mitochondria that participate.
  • 97. BROWN FAT IS VERY IMPORTANT IN HIBERNATING ANIMALS
  • 98.
  • 99. Uncouple Electron Transport and Oxidative Phosphorylation. Destroy Proton motive force.  Stop ATP synthesis.  Activate ETC reactions. Increase the lost of energy as heat. EFFECT OF UNCOUPLERS
  • 100.
  • 101. WAITING ROOM # 1 To your consultation room, was brought by her friends, a young lady intoxicated with cyanide. She was working in a chemistry laboratory in the University. After physical examination you diagnosed her dead. One of her friends was terrify, and came to talk with you. She was crying disgracefully and suddenly she ask you why cyanide killed her so rapidly. On the base of your knowledge about cellular respiration, how can you explain the toxicity of cyanide?
  • 102. A very important man came to your house to visit you. Mohamed, your Mathematics lecturer in your pre-university school. For you, he is a symbol of a good lecturer, an excellent person and a wise man. You love him very much. He is now 40 year-old and he was diagnostic as a hyperthyroid. He is very worry because his heat intolerance with heavy sweating, heart palpitations, and tremulousness. Over the past 4 months, he has lost weight in spite of a good appetite. WAITING ROOM # 2
  • 103. He explained you that he was trying to find information in internet to help him to understand his symptomatology. He knew that his heat intolerance is related with a problem with his central metabolism, but he did not understand the explanation in internet. He remembered you, as one of his best students and came to your house requesting your help. On the base of your knowledge about central metabolism, how can you explain him , the cause of his heat intolerance? WAITING ROOM # 2
  • 104. Thyroid hormones increase the synthesis and as consequence the level of UCP2 and UCP3 in the inner mitochondrial membrane. UCP2 and UCP3 (termogenines) are channels that propitiate the reenter of hydrogen protons to mitochondrial matrix. Electrochemical gradient is destroy. ATP production decreases and the ETC is enhanced. As a consequence of the increased rate of the electron transport chain, most released energy is lost as heat, this is because hyperthyroidism results in increased heat intolerance. WAITING ROOM # 2