SlideShare uma empresa Scribd logo
1 de 32
Baixar para ler offline
Medical Microbiology Laboratory
Gram Negative Rods (Bacilli)
(Aeromonas, Helicobacter and
Campylobacter spp.)
Hussein A. Abid
Medical Laboratory Scientist
Member at American Society of Microbiology
Chairman of Iraqi Medical Laboratory Association
Teacher at Middle Technical University
TAXONOMY
Scientific name Rank
• Aeromonadaceae Family
• Aeromonas Genus
• A. hydrophila
• A. caviae
• A. veronii
Species
(medically important spp.)
2
Aeromonas spp.
 Gram-negative rod-shaped bacteria that morphologically
resemble members of the family Enterobacteriaceae
 Facultative anaerobic
 Most of the 14 described species have been associated
with human diseases
 The organisms are ubiquitous in fresh and brackish water
 Acquired by ingestion of or exposure to contaminated
water or food
 Motile species have single polar flagellum (nonmotile
species apparently not associated with human disease)
3
4
Aeromonas spp.
 Associated with gastrointestinal disease:
 Chronic diarrhea in adults
 Self-limited acute, severe disease in children resembling
shigellosis with blood and leukocytes in the stool
 3% carriage rate
 Wound infections:
 Opportunistic systemic disease in immunocompromised
 Putative virulence factors include: endotoxin;
hemolysins; eneterotoxin; proteases; siderophores;
adhesins
TAXONOMY
Scientific name Rank
• Helicobacteraceae Family
• Helicobacter Genus
• H. pylori
• H. cinaedi
• H. fenneliae
Species
(medically important spp.)
5
Important human pathogen with their reservoirs:
• H. pylori (human; no animal reservoir)
• H. cinaedi (male homosexuals; rodents)
• H. fenneliae (male homosexuals; rodents)
Helicobacter spp.
 First observed in 1983 as
Campylobacter-like organisms
(formerly Campylobacter pyloridis)
in the stomachs of patients with
type B gastritis.
6
 Nomenclature of Helicobacter was first established in
1989.
 Only three species are currently considered to be human
pathogens
Helicobacter spp.
 Helicobacter pylori is major human pathogen associated
with gastritis; peptic ulcer disease and neoplasia
 Stomach of many animal species also colonized
 Urease (gastric strains only), mucinase, and catalase
positive, highly motile microorganisms
 Other Helicobacters: H. cinaedi and H. fenneliae
 Colonize human intestinal tract
 Isolated from homosexual men with proctitis (inflammation
of rectum and anus), proctocolitis, enteritis, and bacteremia
and are often transmitted through sexual practices
7
Helicobacter spp.
 Gram-negative; helical (spiral or curved); blunted/
rounded ends in gastric biopsy specimens; cells become
rod-like and coccoid on prolonged culture
 Produce urease, mucinase, and catalase
 H. pylori tuft (lophotrichous) of 4-6 sheathed flagella
(30um X 2.5nm) attached at one pole
 Single polar flagellum on H. fenneliae & H. cinaedi
 Smooth cell wall with unusual fatty acids
8
PATHOGENESIS (H. pylori)
 Colonize mucosal lining of stomach & duodenum in
man & animals
 Adherent to gastric surface epithelium or pit epithelial
cells deep within the mucosal crypts adjacent to gastric
mucosal cells
 Mucosa protects the stomach wall from its own gastric
milleu of digestive enzymes and hydrochloric acid
 Mucosa also protects Helicobacter from immune
response
 Most gastric adenocarcinomas and lymphomas are
concurrent with or preceded by an infection with 9
LAB IDENTIFICATION (H. pylori)
 Recovered from or detected in endoscopic antral gastric
biopsy material; multiple biopsies are taken
 Many different transport media
 Culture media containing whole or lysed blood
 Microaerophilic
 Grow well at 37 o
C, but not at 25 nor 42 o
C
 Like Campylobacter, does not use carbohydrates, neither
fermentatively nor oxidative.ely
10
H. pylori
Clinical specimens:
 Biopsy for histopathological examination
 Stool for antigen detecting (by ELISA)
 Blood for serological testing
11
H. pylori (microscopy)
 Gram-negative bacilli, curve or spiral shape
12
H. pylori (culture)
 Blood agar, chocolate agar and Columbia blood agar,
small, convex, translucent, non hemolytic colonies.
13
Blood agar Columbia blood agar
14
BIOCHEMICAL TESTS
1. Catalase: positive (+ve)
2. Oxidase: positive (+ve)
3. Mucinase: positive (+ve)
4. Motility: motile
5. Hippurate hydrolysis: negative (-ve)
6. Urease: positive (+ve), within 2 minutes
15
BIOCHEMICAL TESTS
+VE -VE
Motility testing
16
17
18
UREA BREATH TEST
19
SEROLOGICAL TESTS
20
TREATMENT
Triple Chemotherapy (synergism):
 Proton pump inhibitor (e.g., omeprazole = Prilosec(R))
 One or more antibiotics (e.g., clarithromycin;
amoxicillin; metronidazole)
 Bismuth compound
Inadequate treatment results in recurrence of symptoms
TAXONOMY
Scientific name Rank
• Campylobacteraceae Family
• Campylobacter Genus
• C. jejuni
• C. coli
• C. fetus
Species
(medically important spp.)
21
Campylobacter spp.
 First isolated as Vibrio fetus in 1909 from spontaneous
abortions in livestock
 Campylobacter enteritis was not recognized until the mid-
1970s when selective isolation media were developed for
culturing campylobacters from human feces
 Most common form of acute infectious diarrhea in
developed countries; higher incidence than Salmonella &
Shigella combined
 In the U.S. > 2 million cases annually, an annual
incidence close to the 1.1% observed in the United
Kingdom; Estimated 200-700 deaths 22
Campylobacter spp.
 Small, thin, helical (spiral or curved) cells with typical gram-
negative cell wall; “Gull-winged” appearance
o Tendency to form coccoid & elongated forms on prolonged
culture or when exposed to O2
 Distinctive rapid darting motility:
o Long sheathed polar flagellum at one (polar) or both
(bipolar) ends of the cell
o Motility slows quickly in wet mount preparation
 Microaerophilic & capnophilic 5% O2,10% CO2, 85% N2
 Thermophilic (42-43 ºC) (except C. fetus)
 May become non-culturable in nature
 Oxidase: positive 23
PATHOGENESIS (Campylobacter spp.)
 Campylobacteriosis is an infection by Campylobacter
 The common routes of transmission are fecal-oral, ingestion of contaminated food or
water, and the eating of raw meat.
 It produces an inflammatory, sometimes bloody, diarrhea, periodontitis or dysentery
syndrome, mostly including cramps, fever and pain. The infection is usually self-
limiting and in most cases, symptomatic treatment by liquid and electrolyte
replacement is enough in human infections. The use of antibiotics, on the other
hand, is controversial. Symptoms typically last for five to seven days.
 The sites of tissue injury include the jejunum, the ileum, and the colon. Most strains
of C jejuni produce a toxin (cytolethal distending toxin) that hinders the cells from
dividing and activating the immune system. This helps the bacteria to evade the
immune system and survive for a limited time in the cells. A cholera-like enterotoxin
was once thought to be also made, but this appears not to be the case.
 In some cases, a Campylobacter infection can be the underlying cause of Guillain–
Barré syndrome. Gastrointestinal perforation is a rare complication of ileal infection.
 Infectious dose and host immunity determine whether gastroenteric disease
develops (Some people infected with as few as 500 organisms while others need
>106
CFU) 24
LAB IDENTIFICATION (Campylobacter spp.)
Specimen collection and processing:
 Feces refrigerated & examined within few hours
 Rectal swabs in semisolid transport medium
 Blood drawn for C. fetus
 Care to avoid oxygen exposure
 Selective isolation by filtration of stool specimen
 Enrichment broth & selective media
 A selective blood agar medium (Skirrow's medium) can
be used. Greater selectivity can be gained with an
infusion of a cocktail of antibiotics: vancomycin,
polymixin-B, trimethoprim and actidione, (Preston's agar).
25
LAB IDENTIFICATION (Campylobacter spp.)
Microscopy:
 Gull-wing appearance in gram stain
 Darting motility in fresh stool (rarely done in clinical lab)
 Fecal leukocytes are commonly present
Identification:
 Growth at 25, 37, or 42-43 o
C
 Hippurate hydrolysis (C. jejuni is positive)
 Susceptibility to Nalidixic acid & Cephalothin
26
27
Campylobacter (microscopy)
 Gram negative (-ve), curved rods
28
Campylobacter (culture)
 Butzler’s agar (blood agar + antibiotics): color white-
gray, mucoid-slight, microaerophilic O2 5% & CO2 10%,
growth at 37 °C & 42 °C, no growth at 25°C. Non
hemolytic, droplet like colonies, transparent to gray-white.
29
Campylobacter (culture)
 Blood agar plate (BAP):
On Blood agar: C. jejuni and C. coli produce non-
hemolytic spreading, droplet-like colonies
30
BIOCHEMICAL TESTS
1. Catalase: positive (+ve)
2. Oxidase: positive (+ve)
3. Motility: motile
4. Hippurate hydrolysis: positive for C. jejuni, negative
for C. coli
5. Urease: negative (-ve)
31
BIOCHEMICAL TESTS
Hippurate hydrolysis testing
+ve -ve
32
BIOCHEMICAL TESTS
Campylobacters are motile therefore dispersed growth is
observed in motility medium

Mais conteúdo relacionado

Mais procurados

Vibrio the organism and laboratory diagnosis
Vibrio the organism and laboratory diagnosisVibrio the organism and laboratory diagnosis
Vibrio the organism and laboratory diagnosisRagya Bharadwaj
 
Neisseria - Prac. Microbiology
Neisseria - Prac. MicrobiologyNeisseria - Prac. Microbiology
Neisseria - Prac. MicrobiologyCU Dentistry 2019
 
Medical Microbiology Laboratory (Bacillus spp.)
Medical Microbiology Laboratory (Bacillus spp.)Medical Microbiology Laboratory (Bacillus spp.)
Medical Microbiology Laboratory (Bacillus spp.)Hussein Al-tameemi
 
SDA culture media
SDA culture media SDA culture media
SDA culture media Vamsi kumar
 
Medical Microbiology Laboratory (Bacteroides spp.)
Medical Microbiology Laboratory (Bacteroides spp.)Medical Microbiology Laboratory (Bacteroides spp.)
Medical Microbiology Laboratory (Bacteroides spp.)Hussein Al-tameemi
 
Medical Microbiology Laboratory (Clostridium spp.)
Medical Microbiology Laboratory (Clostridium spp.)Medical Microbiology Laboratory (Clostridium spp.)
Medical Microbiology Laboratory (Clostridium spp.)Hussein Al-tameemi
 
Medical Microbiology Laboratory (streptococcus spp.)
Medical Microbiology Laboratory (streptococcus spp.)Medical Microbiology Laboratory (streptococcus spp.)
Medical Microbiology Laboratory (streptococcus spp.)Hussein Al-tameemi
 
Inducible Clindamycin Resistance Test
Inducible Clindamycin Resistance TestInducible Clindamycin Resistance Test
Inducible Clindamycin Resistance TestDr. Samira Fattah
 
Microbiology - Enterics ( Citrobacter, Edwardsiella, & Arizonae )
Microbiology - Enterics ( Citrobacter, Edwardsiella, & Arizonae )Microbiology - Enterics ( Citrobacter, Edwardsiella, & Arizonae )
Microbiology - Enterics ( Citrobacter, Edwardsiella, & Arizonae )Hanna Palmos
 
Campylobacter & helicobacter dr. negi
Campylobacter & helicobacter dr. negiCampylobacter & helicobacter dr. negi
Campylobacter & helicobacter dr. negisanjay negi
 
Diagnostic procedures of schistosomiasis
Diagnostic procedures of schistosomiasisDiagnostic procedures of schistosomiasis
Diagnostic procedures of schistosomiasisNsengiyumva Emmanuel
 
Medical Microbiology Laboratory (Brucella spp.)
Medical Microbiology Laboratory (Brucella spp.)Medical Microbiology Laboratory (Brucella spp.)
Medical Microbiology Laboratory (Brucella spp.)Hussein Al-tameemi
 
Medical Microbiology Laboratory (biochemical tests - iii)
Medical Microbiology Laboratory (biochemical tests - iii)Medical Microbiology Laboratory (biochemical tests - iii)
Medical Microbiology Laboratory (biochemical tests - iii)Hussein Al-tameemi
 

Mais procurados (20)

Vibrio the organism and laboratory diagnosis
Vibrio the organism and laboratory diagnosisVibrio the organism and laboratory diagnosis
Vibrio the organism and laboratory diagnosis
 
Neisseria - Prac. Microbiology
Neisseria - Prac. MicrobiologyNeisseria - Prac. Microbiology
Neisseria - Prac. Microbiology
 
Medical Microbiology Laboratory (Bacillus spp.)
Medical Microbiology Laboratory (Bacillus spp.)Medical Microbiology Laboratory (Bacillus spp.)
Medical Microbiology Laboratory (Bacillus spp.)
 
Proteus spp lecture
Proteus spp lectureProteus spp lecture
Proteus spp lecture
 
SDA culture media
SDA culture media SDA culture media
SDA culture media
 
Medical Microbiology Laboratory (Bacteroides spp.)
Medical Microbiology Laboratory (Bacteroides spp.)Medical Microbiology Laboratory (Bacteroides spp.)
Medical Microbiology Laboratory (Bacteroides spp.)
 
Medical Microbiology Laboratory (Clostridium spp.)
Medical Microbiology Laboratory (Clostridium spp.)Medical Microbiology Laboratory (Clostridium spp.)
Medical Microbiology Laboratory (Clostridium spp.)
 
Shigella
ShigellaShigella
Shigella
 
Medical Microbiology Laboratory (streptococcus spp.)
Medical Microbiology Laboratory (streptococcus spp.)Medical Microbiology Laboratory (streptococcus spp.)
Medical Microbiology Laboratory (streptococcus spp.)
 
Proteus spp (2)
Proteus spp (2)Proteus spp (2)
Proteus spp (2)
 
Inducible Clindamycin Resistance Test
Inducible Clindamycin Resistance TestInducible Clindamycin Resistance Test
Inducible Clindamycin Resistance Test
 
Microbiology - Enterics ( Citrobacter, Edwardsiella, & Arizonae )
Microbiology - Enterics ( Citrobacter, Edwardsiella, & Arizonae )Microbiology - Enterics ( Citrobacter, Edwardsiella, & Arizonae )
Microbiology - Enterics ( Citrobacter, Edwardsiella, & Arizonae )
 
Campylobacter & helicobacter dr. negi
Campylobacter & helicobacter dr. negiCampylobacter & helicobacter dr. negi
Campylobacter & helicobacter dr. negi
 
Campylobacter
CampylobacterCampylobacter
Campylobacter
 
Diagnostic procedures of schistosomiasis
Diagnostic procedures of schistosomiasisDiagnostic procedures of schistosomiasis
Diagnostic procedures of schistosomiasis
 
Enterobacteriaceae
EnterobacteriaceaeEnterobacteriaceae
Enterobacteriaceae
 
SYSTEMIC MYCOSES `
SYSTEMIC MYCOSES `SYSTEMIC MYCOSES `
SYSTEMIC MYCOSES `
 
16. enterobacteriaceae
16. enterobacteriaceae16. enterobacteriaceae
16. enterobacteriaceae
 
Medical Microbiology Laboratory (Brucella spp.)
Medical Microbiology Laboratory (Brucella spp.)Medical Microbiology Laboratory (Brucella spp.)
Medical Microbiology Laboratory (Brucella spp.)
 
Medical Microbiology Laboratory (biochemical tests - iii)
Medical Microbiology Laboratory (biochemical tests - iii)Medical Microbiology Laboratory (biochemical tests - iii)
Medical Microbiology Laboratory (biochemical tests - iii)
 

Semelhante a Medical Microbiology Laboratory (Aeromonas, Helicobacter and Campylobacter spp.)

Bohomolets Microbiology Lecture #19
Bohomolets Microbiology Lecture #19Bohomolets Microbiology Lecture #19
Bohomolets Microbiology Lecture #19Dr. Rubz
 
E. coli, Klebsiella & proteus
E. coli, Klebsiella & proteusE. coli, Klebsiella & proteus
E. coli, Klebsiella & proteusbnsree
 
L2. Diarrhoea disease and Food poisoning.pptx
L2. Diarrhoea disease and Food poisoning.pptxL2. Diarrhoea disease and Food poisoning.pptx
L2. Diarrhoea disease and Food poisoning.pptxdanielmwandu
 
Other Gram Negative Bacilli
Other Gram Negative BacilliOther Gram Negative Bacilli
Other Gram Negative BacilliMD Specialclass
 
Other Gram Negative Bacilli
Other Gram Negative BacilliOther Gram Negative Bacilli
Other Gram Negative BacilliMD Specialclass
 
Microbiological Aspects Of Diarrhoea
Microbiological Aspects Of DiarrhoeaMicrobiological Aspects Of Diarrhoea
Microbiological Aspects Of DiarrhoeaTittu Joseph
 
Enterobacteriaceae
EnterobacteriaceaeEnterobacteriaceae
EnterobacteriaceaeRomaChougale
 
Opportunistic Protozoans - Microbiology
Opportunistic Protozoans - MicrobiologyOpportunistic Protozoans - Microbiology
Opportunistic Protozoans - MicrobiologyAbhishek Yadav
 
Medical Microbiology Laboratory (Vibrio spp.)
Medical Microbiology Laboratory (Vibrio spp.)Medical Microbiology Laboratory (Vibrio spp.)
Medical Microbiology Laboratory (Vibrio spp.)Hussein Al-tameemi
 
Staphylococci 09 10 Med
Staphylococci 09 10  MedStaphylococci 09 10  Med
Staphylococci 09 10 Medguestb0a8ba3
 

Semelhante a Medical Microbiology Laboratory (Aeromonas, Helicobacter and Campylobacter spp.) (20)

Vibionaceae
VibionaceaeVibionaceae
Vibionaceae
 
Bohomolets Microbiology Lecture #19
Bohomolets Microbiology Lecture #19Bohomolets Microbiology Lecture #19
Bohomolets Microbiology Lecture #19
 
E. coli, Klebsiella & proteus
E. coli, Klebsiella & proteusE. coli, Klebsiella & proteus
E. coli, Klebsiella & proteus
 
L2. Diarrhoea disease and Food poisoning.pptx
L2. Diarrhoea disease and Food poisoning.pptxL2. Diarrhoea disease and Food poisoning.pptx
L2. Diarrhoea disease and Food poisoning.pptx
 
Salmonella
SalmonellaSalmonella
Salmonella
 
Other Gram Negative Bacilli
Other Gram Negative BacilliOther Gram Negative Bacilli
Other Gram Negative Bacilli
 
Other Gram Negative Bacilli
Other Gram Negative BacilliOther Gram Negative Bacilli
Other Gram Negative Bacilli
 
Klebsiella+Proteus+Uti
Klebsiella+Proteus+UtiKlebsiella+Proteus+Uti
Klebsiella+Proteus+Uti
 
H. pylori
H. pyloriH. pylori
H. pylori
 
Microbiological Aspects Of Diarrhoea
Microbiological Aspects Of DiarrhoeaMicrobiological Aspects Of Diarrhoea
Microbiological Aspects Of Diarrhoea
 
Campylobacter & Helicobacter.ppt
Campylobacter & Helicobacter.pptCampylobacter & Helicobacter.ppt
Campylobacter & Helicobacter.ppt
 
Enterobacteriaceae
EnterobacteriaceaeEnterobacteriaceae
Enterobacteriaceae
 
12 campylobacter helicobacter
12 campylobacter helicobacter12 campylobacter helicobacter
12 campylobacter helicobacter
 
Specimen Processing.ppt
Specimen Processing.pptSpecimen Processing.ppt
Specimen Processing.ppt
 
Opportunistic Protozoans - Microbiology
Opportunistic Protozoans - MicrobiologyOpportunistic Protozoans - Microbiology
Opportunistic Protozoans - Microbiology
 
Enterobactaraecae.pptx
Enterobactaraecae.pptxEnterobactaraecae.pptx
Enterobactaraecae.pptx
 
Medical Microbiology Laboratory (Vibrio spp.)
Medical Microbiology Laboratory (Vibrio spp.)Medical Microbiology Laboratory (Vibrio spp.)
Medical Microbiology Laboratory (Vibrio spp.)
 
Journal of Bacteriology and Mycology
Journal of Bacteriology and MycologyJournal of Bacteriology and Mycology
Journal of Bacteriology and Mycology
 
Microlect13enterobacteriaceae
Microlect13enterobacteriaceaeMicrolect13enterobacteriaceae
Microlect13enterobacteriaceae
 
Staphylococci 09 10 Med
Staphylococci 09 10  MedStaphylococci 09 10  Med
Staphylococci 09 10 Med
 

Mais de Hussein Al-tameemi

Preventive role of probiotics to face SARS-CoV-2 pandemic
Preventive role of probiotics to face SARS-CoV-2 pandemicPreventive role of probiotics to face SARS-CoV-2 pandemic
Preventive role of probiotics to face SARS-CoV-2 pandemicHussein Al-tameemi
 
Erythrocyte Sedimentation Rate (ESR)
Erythrocyte Sedimentation Rate (ESR)Erythrocyte Sedimentation Rate (ESR)
Erythrocyte Sedimentation Rate (ESR)Hussein Al-tameemi
 
Blood collection, handling, and anticoagulants
Blood collection, handling, and anticoagulantsBlood collection, handling, and anticoagulants
Blood collection, handling, and anticoagulantsHussein Al-tameemi
 
الفحص المختبري وتفسير النتائج لالتهاب الكبد الفايروسي B
الفحص المختبري وتفسير النتائج لالتهاب الكبد الفايروسي Bالفحص المختبري وتفسير النتائج لالتهاب الكبد الفايروسي B
الفحص المختبري وتفسير النتائج لالتهاب الكبد الفايروسي BHussein Al-tameemi
 
Introduction to medical laboratory technology
Introduction to medical laboratory technologyIntroduction to medical laboratory technology
Introduction to medical laboratory technologyHussein Al-tameemi
 
Introduction to haematology laboratory
Introduction to haematology laboratoryIntroduction to haematology laboratory
Introduction to haematology laboratoryHussein Al-tameemi
 
CSF MICROBIOLOGICAL EXAMINATION – II
CSF MICROBIOLOGICAL EXAMINATION – IICSF MICROBIOLOGICAL EXAMINATION – II
CSF MICROBIOLOGICAL EXAMINATION – IIHussein Al-tameemi
 
CSF MICROBIOLOGICAL EXAMINATION – I
CSF MICROBIOLOGICAL EXAMINATION – ICSF MICROBIOLOGICAL EXAMINATION – I
CSF MICROBIOLOGICAL EXAMINATION – IHussein Al-tameemi
 
CSF processing in medical laboratory (01)
CSF processing in medical laboratory (01)CSF processing in medical laboratory (01)
CSF processing in medical laboratory (01)Hussein Al-tameemi
 

Mais de Hussein Al-tameemi (20)

Preventive role of probiotics to face SARS-CoV-2 pandemic
Preventive role of probiotics to face SARS-CoV-2 pandemicPreventive role of probiotics to face SARS-CoV-2 pandemic
Preventive role of probiotics to face SARS-CoV-2 pandemic
 
General Urine Examination
General Urine ExaminationGeneral Urine Examination
General Urine Examination
 
Blood cell count
Blood cell countBlood cell count
Blood cell count
 
Erythrocyte Sedimentation Rate (ESR)
Erythrocyte Sedimentation Rate (ESR)Erythrocyte Sedimentation Rate (ESR)
Erythrocyte Sedimentation Rate (ESR)
 
Hematocrit determination
Hematocrit determinationHematocrit determination
Hematocrit determination
 
Hemoglobin estimation
Hemoglobin estimationHemoglobin estimation
Hemoglobin estimation
 
Blood collection, handling, and anticoagulants
Blood collection, handling, and anticoagulantsBlood collection, handling, and anticoagulants
Blood collection, handling, and anticoagulants
 
الفحص المختبري وتفسير النتائج لالتهاب الكبد الفايروسي B
الفحص المختبري وتفسير النتائج لالتهاب الكبد الفايروسي Bالفحص المختبري وتفسير النتائج لالتهاب الكبد الفايروسي B
الفحص المختبري وتفسير النتائج لالتهاب الكبد الفايروسي B
 
Introduction to medical laboratory technology
Introduction to medical laboratory technologyIntroduction to medical laboratory technology
Introduction to medical laboratory technology
 
Blood sample collection
Blood sample collectionBlood sample collection
Blood sample collection
 
Introduction to haematology laboratory
Introduction to haematology laboratoryIntroduction to haematology laboratory
Introduction to haematology laboratory
 
CSF BIOCHEMICAL EXAMINATION
CSF BIOCHEMICAL EXAMINATIONCSF BIOCHEMICAL EXAMINATION
CSF BIOCHEMICAL EXAMINATION
 
CSF MICROBIOLOGICAL EXAMINATION – II
CSF MICROBIOLOGICAL EXAMINATION – IICSF MICROBIOLOGICAL EXAMINATION – II
CSF MICROBIOLOGICAL EXAMINATION – II
 
CSF MICROBIOLOGICAL EXAMINATION – I
CSF MICROBIOLOGICAL EXAMINATION – ICSF MICROBIOLOGICAL EXAMINATION – I
CSF MICROBIOLOGICAL EXAMINATION – I
 
CSF processing in medical laboratory (01)
CSF processing in medical laboratory (01)CSF processing in medical laboratory (01)
CSF processing in medical laboratory (01)
 
Practical pathology
Practical pathologyPractical pathology
Practical pathology
 
Cardiac biomarkers - II
Cardiac biomarkers  - IICardiac biomarkers  - II
Cardiac biomarkers - II
 
Cardiac biomarkers - I
Cardiac biomarkers  - ICardiac biomarkers  - I
Cardiac biomarkers - I
 
Myocardial infarction
Myocardial infarctionMyocardial infarction
Myocardial infarction
 
Human heart
Human heartHuman heart
Human heart
 

Último

Q4-W6-Restating Informational Text Grade 3
Q4-W6-Restating Informational Text Grade 3Q4-W6-Restating Informational Text Grade 3
Q4-W6-Restating Informational Text Grade 3JemimahLaneBuaron
 
Call Girls in Dwarka Mor Delhi Contact Us 9654467111
Call Girls in Dwarka Mor Delhi Contact Us 9654467111Call Girls in Dwarka Mor Delhi Contact Us 9654467111
Call Girls in Dwarka Mor Delhi Contact Us 9654467111Sapana Sha
 
The basics of sentences session 2pptx copy.pptx
The basics of sentences session 2pptx copy.pptxThe basics of sentences session 2pptx copy.pptx
The basics of sentences session 2pptx copy.pptxheathfieldcps1
 
social pharmacy d-pharm 1st year by Pragati K. Mahajan
social pharmacy d-pharm 1st year by Pragati K. Mahajansocial pharmacy d-pharm 1st year by Pragati K. Mahajan
social pharmacy d-pharm 1st year by Pragati K. Mahajanpragatimahajan3
 
APM Welcome, APM North West Network Conference, Synergies Across Sectors
APM Welcome, APM North West Network Conference, Synergies Across SectorsAPM Welcome, APM North West Network Conference, Synergies Across Sectors
APM Welcome, APM North West Network Conference, Synergies Across SectorsAssociation for Project Management
 
Separation of Lanthanides/ Lanthanides and Actinides
Separation of Lanthanides/ Lanthanides and ActinidesSeparation of Lanthanides/ Lanthanides and Actinides
Separation of Lanthanides/ Lanthanides and ActinidesFatimaKhan178732
 
Software Engineering Methodologies (overview)
Software Engineering Methodologies (overview)Software Engineering Methodologies (overview)
Software Engineering Methodologies (overview)eniolaolutunde
 
microwave assisted reaction. General introduction
microwave assisted reaction. General introductionmicrowave assisted reaction. General introduction
microwave assisted reaction. General introductionMaksud Ahmed
 
Beyond the EU: DORA and NIS 2 Directive's Global Impact
Beyond the EU: DORA and NIS 2 Directive's Global ImpactBeyond the EU: DORA and NIS 2 Directive's Global Impact
Beyond the EU: DORA and NIS 2 Directive's Global ImpactPECB
 
Arihant handbook biology for class 11 .pdf
Arihant handbook biology for class 11 .pdfArihant handbook biology for class 11 .pdf
Arihant handbook biology for class 11 .pdfchloefrazer622
 
Sanyam Choudhary Chemistry practical.pdf
Sanyam Choudhary Chemistry practical.pdfSanyam Choudhary Chemistry practical.pdf
Sanyam Choudhary Chemistry practical.pdfsanyamsingh5019
 
BAG TECHNIQUE Bag technique-a tool making use of public health bag through wh...
BAG TECHNIQUE Bag technique-a tool making use of public health bag through wh...BAG TECHNIQUE Bag technique-a tool making use of public health bag through wh...
BAG TECHNIQUE Bag technique-a tool making use of public health bag through wh...Sapna Thakur
 
Accessible design: Minimum effort, maximum impact
Accessible design: Minimum effort, maximum impactAccessible design: Minimum effort, maximum impact
Accessible design: Minimum effort, maximum impactdawncurless
 
Interactive Powerpoint_How to Master effective communication
Interactive Powerpoint_How to Master effective communicationInteractive Powerpoint_How to Master effective communication
Interactive Powerpoint_How to Master effective communicationnomboosow
 
Mastering the Unannounced Regulatory Inspection
Mastering the Unannounced Regulatory InspectionMastering the Unannounced Regulatory Inspection
Mastering the Unannounced Regulatory InspectionSafetyChain Software
 
Student login on Anyboli platform.helpin
Student login on Anyboli platform.helpinStudent login on Anyboli platform.helpin
Student login on Anyboli platform.helpinRaunakKeshri1
 
BASLIQ CURRENT LOOKBOOK LOOKBOOK(1) (1).pdf
BASLIQ CURRENT LOOKBOOK  LOOKBOOK(1) (1).pdfBASLIQ CURRENT LOOKBOOK  LOOKBOOK(1) (1).pdf
BASLIQ CURRENT LOOKBOOK LOOKBOOK(1) (1).pdfSoniaTolstoy
 
Measures of Central Tendency: Mean, Median and Mode
Measures of Central Tendency: Mean, Median and ModeMeasures of Central Tendency: Mean, Median and Mode
Measures of Central Tendency: Mean, Median and ModeThiyagu K
 

Último (20)

Q4-W6-Restating Informational Text Grade 3
Q4-W6-Restating Informational Text Grade 3Q4-W6-Restating Informational Text Grade 3
Q4-W6-Restating Informational Text Grade 3
 
Call Girls in Dwarka Mor Delhi Contact Us 9654467111
Call Girls in Dwarka Mor Delhi Contact Us 9654467111Call Girls in Dwarka Mor Delhi Contact Us 9654467111
Call Girls in Dwarka Mor Delhi Contact Us 9654467111
 
The basics of sentences session 2pptx copy.pptx
The basics of sentences session 2pptx copy.pptxThe basics of sentences session 2pptx copy.pptx
The basics of sentences session 2pptx copy.pptx
 
social pharmacy d-pharm 1st year by Pragati K. Mahajan
social pharmacy d-pharm 1st year by Pragati K. Mahajansocial pharmacy d-pharm 1st year by Pragati K. Mahajan
social pharmacy d-pharm 1st year by Pragati K. Mahajan
 
APM Welcome, APM North West Network Conference, Synergies Across Sectors
APM Welcome, APM North West Network Conference, Synergies Across SectorsAPM Welcome, APM North West Network Conference, Synergies Across Sectors
APM Welcome, APM North West Network Conference, Synergies Across Sectors
 
Separation of Lanthanides/ Lanthanides and Actinides
Separation of Lanthanides/ Lanthanides and ActinidesSeparation of Lanthanides/ Lanthanides and Actinides
Separation of Lanthanides/ Lanthanides and Actinides
 
Mattingly "AI & Prompt Design: The Basics of Prompt Design"
Mattingly "AI & Prompt Design: The Basics of Prompt Design"Mattingly "AI & Prompt Design: The Basics of Prompt Design"
Mattingly "AI & Prompt Design: The Basics of Prompt Design"
 
Software Engineering Methodologies (overview)
Software Engineering Methodologies (overview)Software Engineering Methodologies (overview)
Software Engineering Methodologies (overview)
 
microwave assisted reaction. General introduction
microwave assisted reaction. General introductionmicrowave assisted reaction. General introduction
microwave assisted reaction. General introduction
 
Beyond the EU: DORA and NIS 2 Directive's Global Impact
Beyond the EU: DORA and NIS 2 Directive's Global ImpactBeyond the EU: DORA and NIS 2 Directive's Global Impact
Beyond the EU: DORA and NIS 2 Directive's Global Impact
 
Código Creativo y Arte de Software | Unidad 1
Código Creativo y Arte de Software | Unidad 1Código Creativo y Arte de Software | Unidad 1
Código Creativo y Arte de Software | Unidad 1
 
Arihant handbook biology for class 11 .pdf
Arihant handbook biology for class 11 .pdfArihant handbook biology for class 11 .pdf
Arihant handbook biology for class 11 .pdf
 
Sanyam Choudhary Chemistry practical.pdf
Sanyam Choudhary Chemistry practical.pdfSanyam Choudhary Chemistry practical.pdf
Sanyam Choudhary Chemistry practical.pdf
 
BAG TECHNIQUE Bag technique-a tool making use of public health bag through wh...
BAG TECHNIQUE Bag technique-a tool making use of public health bag through wh...BAG TECHNIQUE Bag technique-a tool making use of public health bag through wh...
BAG TECHNIQUE Bag technique-a tool making use of public health bag through wh...
 
Accessible design: Minimum effort, maximum impact
Accessible design: Minimum effort, maximum impactAccessible design: Minimum effort, maximum impact
Accessible design: Minimum effort, maximum impact
 
Interactive Powerpoint_How to Master effective communication
Interactive Powerpoint_How to Master effective communicationInteractive Powerpoint_How to Master effective communication
Interactive Powerpoint_How to Master effective communication
 
Mastering the Unannounced Regulatory Inspection
Mastering the Unannounced Regulatory InspectionMastering the Unannounced Regulatory Inspection
Mastering the Unannounced Regulatory Inspection
 
Student login on Anyboli platform.helpin
Student login on Anyboli platform.helpinStudent login on Anyboli platform.helpin
Student login on Anyboli platform.helpin
 
BASLIQ CURRENT LOOKBOOK LOOKBOOK(1) (1).pdf
BASLIQ CURRENT LOOKBOOK  LOOKBOOK(1) (1).pdfBASLIQ CURRENT LOOKBOOK  LOOKBOOK(1) (1).pdf
BASLIQ CURRENT LOOKBOOK LOOKBOOK(1) (1).pdf
 
Measures of Central Tendency: Mean, Median and Mode
Measures of Central Tendency: Mean, Median and ModeMeasures of Central Tendency: Mean, Median and Mode
Measures of Central Tendency: Mean, Median and Mode
 

Medical Microbiology Laboratory (Aeromonas, Helicobacter and Campylobacter spp.)

  • 1. Medical Microbiology Laboratory Gram Negative Rods (Bacilli) (Aeromonas, Helicobacter and Campylobacter spp.) Hussein A. Abid Medical Laboratory Scientist Member at American Society of Microbiology Chairman of Iraqi Medical Laboratory Association Teacher at Middle Technical University
  • 2. TAXONOMY Scientific name Rank • Aeromonadaceae Family • Aeromonas Genus • A. hydrophila • A. caviae • A. veronii Species (medically important spp.) 2
  • 3. Aeromonas spp.  Gram-negative rod-shaped bacteria that morphologically resemble members of the family Enterobacteriaceae  Facultative anaerobic  Most of the 14 described species have been associated with human diseases  The organisms are ubiquitous in fresh and brackish water  Acquired by ingestion of or exposure to contaminated water or food  Motile species have single polar flagellum (nonmotile species apparently not associated with human disease) 3
  • 4. 4 Aeromonas spp.  Associated with gastrointestinal disease:  Chronic diarrhea in adults  Self-limited acute, severe disease in children resembling shigellosis with blood and leukocytes in the stool  3% carriage rate  Wound infections:  Opportunistic systemic disease in immunocompromised  Putative virulence factors include: endotoxin; hemolysins; eneterotoxin; proteases; siderophores; adhesins
  • 5. TAXONOMY Scientific name Rank • Helicobacteraceae Family • Helicobacter Genus • H. pylori • H. cinaedi • H. fenneliae Species (medically important spp.) 5 Important human pathogen with their reservoirs: • H. pylori (human; no animal reservoir) • H. cinaedi (male homosexuals; rodents) • H. fenneliae (male homosexuals; rodents)
  • 6. Helicobacter spp.  First observed in 1983 as Campylobacter-like organisms (formerly Campylobacter pyloridis) in the stomachs of patients with type B gastritis. 6  Nomenclature of Helicobacter was first established in 1989.  Only three species are currently considered to be human pathogens
  • 7. Helicobacter spp.  Helicobacter pylori is major human pathogen associated with gastritis; peptic ulcer disease and neoplasia  Stomach of many animal species also colonized  Urease (gastric strains only), mucinase, and catalase positive, highly motile microorganisms  Other Helicobacters: H. cinaedi and H. fenneliae  Colonize human intestinal tract  Isolated from homosexual men with proctitis (inflammation of rectum and anus), proctocolitis, enteritis, and bacteremia and are often transmitted through sexual practices 7
  • 8. Helicobacter spp.  Gram-negative; helical (spiral or curved); blunted/ rounded ends in gastric biopsy specimens; cells become rod-like and coccoid on prolonged culture  Produce urease, mucinase, and catalase  H. pylori tuft (lophotrichous) of 4-6 sheathed flagella (30um X 2.5nm) attached at one pole  Single polar flagellum on H. fenneliae & H. cinaedi  Smooth cell wall with unusual fatty acids 8
  • 9. PATHOGENESIS (H. pylori)  Colonize mucosal lining of stomach & duodenum in man & animals  Adherent to gastric surface epithelium or pit epithelial cells deep within the mucosal crypts adjacent to gastric mucosal cells  Mucosa protects the stomach wall from its own gastric milleu of digestive enzymes and hydrochloric acid  Mucosa also protects Helicobacter from immune response  Most gastric adenocarcinomas and lymphomas are concurrent with or preceded by an infection with 9
  • 10. LAB IDENTIFICATION (H. pylori)  Recovered from or detected in endoscopic antral gastric biopsy material; multiple biopsies are taken  Many different transport media  Culture media containing whole or lysed blood  Microaerophilic  Grow well at 37 o C, but not at 25 nor 42 o C  Like Campylobacter, does not use carbohydrates, neither fermentatively nor oxidative.ely 10
  • 11. H. pylori Clinical specimens:  Biopsy for histopathological examination  Stool for antigen detecting (by ELISA)  Blood for serological testing 11
  • 12. H. pylori (microscopy)  Gram-negative bacilli, curve or spiral shape 12
  • 13. H. pylori (culture)  Blood agar, chocolate agar and Columbia blood agar, small, convex, translucent, non hemolytic colonies. 13 Blood agar Columbia blood agar
  • 14. 14 BIOCHEMICAL TESTS 1. Catalase: positive (+ve) 2. Oxidase: positive (+ve) 3. Mucinase: positive (+ve) 4. Motility: motile 5. Hippurate hydrolysis: negative (-ve) 6. Urease: positive (+ve), within 2 minutes
  • 16. 16
  • 17. 17
  • 20. 20 TREATMENT Triple Chemotherapy (synergism):  Proton pump inhibitor (e.g., omeprazole = Prilosec(R))  One or more antibiotics (e.g., clarithromycin; amoxicillin; metronidazole)  Bismuth compound Inadequate treatment results in recurrence of symptoms
  • 21. TAXONOMY Scientific name Rank • Campylobacteraceae Family • Campylobacter Genus • C. jejuni • C. coli • C. fetus Species (medically important spp.) 21
  • 22. Campylobacter spp.  First isolated as Vibrio fetus in 1909 from spontaneous abortions in livestock  Campylobacter enteritis was not recognized until the mid- 1970s when selective isolation media were developed for culturing campylobacters from human feces  Most common form of acute infectious diarrhea in developed countries; higher incidence than Salmonella & Shigella combined  In the U.S. > 2 million cases annually, an annual incidence close to the 1.1% observed in the United Kingdom; Estimated 200-700 deaths 22
  • 23. Campylobacter spp.  Small, thin, helical (spiral or curved) cells with typical gram- negative cell wall; “Gull-winged” appearance o Tendency to form coccoid & elongated forms on prolonged culture or when exposed to O2  Distinctive rapid darting motility: o Long sheathed polar flagellum at one (polar) or both (bipolar) ends of the cell o Motility slows quickly in wet mount preparation  Microaerophilic & capnophilic 5% O2,10% CO2, 85% N2  Thermophilic (42-43 ºC) (except C. fetus)  May become non-culturable in nature  Oxidase: positive 23
  • 24. PATHOGENESIS (Campylobacter spp.)  Campylobacteriosis is an infection by Campylobacter  The common routes of transmission are fecal-oral, ingestion of contaminated food or water, and the eating of raw meat.  It produces an inflammatory, sometimes bloody, diarrhea, periodontitis or dysentery syndrome, mostly including cramps, fever and pain. The infection is usually self- limiting and in most cases, symptomatic treatment by liquid and electrolyte replacement is enough in human infections. The use of antibiotics, on the other hand, is controversial. Symptoms typically last for five to seven days.  The sites of tissue injury include the jejunum, the ileum, and the colon. Most strains of C jejuni produce a toxin (cytolethal distending toxin) that hinders the cells from dividing and activating the immune system. This helps the bacteria to evade the immune system and survive for a limited time in the cells. A cholera-like enterotoxin was once thought to be also made, but this appears not to be the case.  In some cases, a Campylobacter infection can be the underlying cause of Guillain– Barré syndrome. Gastrointestinal perforation is a rare complication of ileal infection.  Infectious dose and host immunity determine whether gastroenteric disease develops (Some people infected with as few as 500 organisms while others need >106 CFU) 24
  • 25. LAB IDENTIFICATION (Campylobacter spp.) Specimen collection and processing:  Feces refrigerated & examined within few hours  Rectal swabs in semisolid transport medium  Blood drawn for C. fetus  Care to avoid oxygen exposure  Selective isolation by filtration of stool specimen  Enrichment broth & selective media  A selective blood agar medium (Skirrow's medium) can be used. Greater selectivity can be gained with an infusion of a cocktail of antibiotics: vancomycin, polymixin-B, trimethoprim and actidione, (Preston's agar). 25
  • 26. LAB IDENTIFICATION (Campylobacter spp.) Microscopy:  Gull-wing appearance in gram stain  Darting motility in fresh stool (rarely done in clinical lab)  Fecal leukocytes are commonly present Identification:  Growth at 25, 37, or 42-43 o C  Hippurate hydrolysis (C. jejuni is positive)  Susceptibility to Nalidixic acid & Cephalothin 26
  • 27. 27 Campylobacter (microscopy)  Gram negative (-ve), curved rods
  • 28. 28 Campylobacter (culture)  Butzler’s agar (blood agar + antibiotics): color white- gray, mucoid-slight, microaerophilic O2 5% & CO2 10%, growth at 37 °C & 42 °C, no growth at 25°C. Non hemolytic, droplet like colonies, transparent to gray-white.
  • 29. 29 Campylobacter (culture)  Blood agar plate (BAP): On Blood agar: C. jejuni and C. coli produce non- hemolytic spreading, droplet-like colonies
  • 30. 30 BIOCHEMICAL TESTS 1. Catalase: positive (+ve) 2. Oxidase: positive (+ve) 3. Motility: motile 4. Hippurate hydrolysis: positive for C. jejuni, negative for C. coli 5. Urease: negative (-ve)
  • 32. 32 BIOCHEMICAL TESTS Campylobacters are motile therefore dispersed growth is observed in motility medium