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DR.HARINATHAREDDY M.Sc, Ph.D.
Department of Microbiology
Sri krishnadevaraya University, Anantapur,
A,P, INDIA
• Thousands of enzymes have been discovered, isolated
and studied.
• Most of these enzymes have been classified into
different groups based on the type of reactions they
catalyse.
• Enzymes are divided into 6 classes each with 4-13
subclasses and named accordingly by a four-digit
number.
International Union of Biochemistry (IUB).
Based on their action they are divided into 6 major classes.
Each enzyme is assigned a 4 Digit code number.
 (i) the first number shows enzyme classes.
 Ii). the second figure indicates the subclass,
 (iii) the third figure gives the sub-subclass,
 (iv) the fourth figure is the serial number of the enzyme in its sub-
subclass.
6 classes of enzymes:
 Oxidoreductases/dehydrogenases:
 Transferases:
 Hydrolases:
 Lyases:
 Isomerases
 Ligases
Oxidoreductases/dehydrogenases:
• Enzymes which catalyse oxido-reduction between two
substrates S1 and S2.
Transferases:
• Enzymes catalysing a transfer of a group, G (other than
hydrogen) between a pair of substrate S and S’.
Hydrolases:
• Enzymes catalysing hydrolysis of:
• ester,
• ether,
• peptide,
• glycosidic,
• C-C,
• C-halide
• P-N bonds.
Lyases:
• Enzymes that catalyse removal of groups from substrates
by mechanisms other than hydrolysis leaving double
bonds..
• Isomerases: Includes all enzymes catalysing inter-
conversion of optical, geometric or positional isomers.
• Ligases: Enzymes catalysing the linking together of 2
compounds, e.g
• catalyse joining of C-O, C-S, C-N, P-O etc.
Co-factors
• Enzymes are composed of one or several polypeptide
chains.
• In number of cases in which non-protein part called
cofactors are bound to the the enzyme to make the
enzyme catalytically active.
• Catalytic activity is lost when the co-factor is removed
from the enzyme.
• In these instances, the protein portion of the enzymes is
called the apoenzyme.
• Three kinds of cofactors may be identified:
• prosthetic groups,
• co-enzymes
• metal ions.
Three kinds of cofactors
• Prosthetic groups
• Co-enzymes
• metal ions
Prosthetic groups
• Prosthetic groups are organic compounds and are
distinguished from other cofactors in that they are
tightly bound to the apoenzyme.
Prosthetic groups
• For example: In peroxidase and catalase, which catalyze
the breakdown of hydrogen peroxide to water and
oxygen.
• In peroxidase and catalase haem is the prosthetic group
and it is a part of the active site of the enzyme.
Co-enzymes
• Co-enzymes are also organic compounds but their
association with the apoenzyme is only transient,
usually occurring during the course of catalysis.
• Coenzymes are vitamins.
• NAD and NADP contain the vitamin niacin.
 Nicotinamide adenine dinucleotide (NADH)
 Nicotinamide adenine dinucleotide phosphate (NADPH)
Metal ions
• A number of enzymes require metal ions for their
activity.
• Metal ions form coordination bonds with side chains at
the active site and at the same time form one or more
coordination bonds with the substrate,
• e.g: Zn is a cofactor for the proteolytic enzyme carboxy-
peptidase.
• The technological function of carboxypeptidase is to
release C-terminal amino acids from proteins
Thank you

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Classification and nomenclature of enzymes

  • 1. DR.HARINATHAREDDY M.Sc, Ph.D. Department of Microbiology Sri krishnadevaraya University, Anantapur, A,P, INDIA
  • 2. • Thousands of enzymes have been discovered, isolated and studied.
  • 3. • Most of these enzymes have been classified into different groups based on the type of reactions they catalyse. • Enzymes are divided into 6 classes each with 4-13 subclasses and named accordingly by a four-digit number.
  • 4. International Union of Biochemistry (IUB). Based on their action they are divided into 6 major classes. Each enzyme is assigned a 4 Digit code number.  (i) the first number shows enzyme classes.  Ii). the second figure indicates the subclass,  (iii) the third figure gives the sub-subclass,  (iv) the fourth figure is the serial number of the enzyme in its sub- subclass.
  • 5. 6 classes of enzymes:  Oxidoreductases/dehydrogenases:  Transferases:  Hydrolases:  Lyases:  Isomerases  Ligases
  • 6.
  • 7.
  • 8. Oxidoreductases/dehydrogenases: • Enzymes which catalyse oxido-reduction between two substrates S1 and S2.
  • 9. Transferases: • Enzymes catalysing a transfer of a group, G (other than hydrogen) between a pair of substrate S and S’.
  • 10. Hydrolases: • Enzymes catalysing hydrolysis of: • ester, • ether, • peptide, • glycosidic, • C-C, • C-halide • P-N bonds.
  • 11. Lyases: • Enzymes that catalyse removal of groups from substrates by mechanisms other than hydrolysis leaving double bonds..
  • 12. • Isomerases: Includes all enzymes catalysing inter- conversion of optical, geometric or positional isomers. • Ligases: Enzymes catalysing the linking together of 2 compounds, e.g • catalyse joining of C-O, C-S, C-N, P-O etc.
  • 14.
  • 15. • Enzymes are composed of one or several polypeptide chains. • In number of cases in which non-protein part called cofactors are bound to the the enzyme to make the enzyme catalytically active. • Catalytic activity is lost when the co-factor is removed from the enzyme.
  • 16. • In these instances, the protein portion of the enzymes is called the apoenzyme. • Three kinds of cofactors may be identified: • prosthetic groups, • co-enzymes • metal ions.
  • 17. Three kinds of cofactors • Prosthetic groups • Co-enzymes • metal ions
  • 18. Prosthetic groups • Prosthetic groups are organic compounds and are distinguished from other cofactors in that they are tightly bound to the apoenzyme.
  • 19. Prosthetic groups • For example: In peroxidase and catalase, which catalyze the breakdown of hydrogen peroxide to water and oxygen. • In peroxidase and catalase haem is the prosthetic group and it is a part of the active site of the enzyme.
  • 20. Co-enzymes • Co-enzymes are also organic compounds but their association with the apoenzyme is only transient, usually occurring during the course of catalysis. • Coenzymes are vitamins. • NAD and NADP contain the vitamin niacin.  Nicotinamide adenine dinucleotide (NADH)  Nicotinamide adenine dinucleotide phosphate (NADPH)
  • 21. Metal ions • A number of enzymes require metal ions for their activity. • Metal ions form coordination bonds with side chains at the active site and at the same time form one or more coordination bonds with the substrate, • e.g: Zn is a cofactor for the proteolytic enzyme carboxy- peptidase.
  • 22. • The technological function of carboxypeptidase is to release C-terminal amino acids from proteins