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Semelhante a Monte Caro Simualtions, Sampling and Markov Chain Monte Carlo
Semelhante a Monte Caro Simualtions, Sampling and Markov Chain Monte Carlo (20)
Mais de Xin-She Yang
Mais de Xin-She Yang (20)
Monte Caro Simualtions, Sampling and Markov Chain Monte Carlo
- 1. Monte Carlo & MCMC Xin-She Yang Monte Carlo Estimating π Buffon’s Monte Carlo Simulations, Sampling and problem Probability Monte Carlo Markov Chain Monte Carlo Monte Carlo integration Quality of Sampling Quasi-Monte Carlo Xin-She Yang Pseudorandom Pseudorandom number generation Other distributions c 2010 Limitations Multivariate distributions Markov Chains Markov chains Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 2. Estimating π Monte Carlo & MCMC Xin-She Yang How to estimate π using only a ruler and some match sticks? Monte Carlo Estimating π Buffon’s problem Probability Monte Carlo Monte Carlo integration Quality of Sampling Quasi-Monte Carlo Pseudorandom Pseudorandom number generation Other distributions Limitations Multivariate distributions Markov Chains Markov chains Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 3. Buffon’s Needle Problem Monte Carlo & MCMC Buffon’s needle problem (1733). Probability of crossing a line Xin-She Yang 2 L p= · , Monte Carlo π d Estimating π where L = length of needles, and d =spacing. Buffon’s problem Probability Monte Carlo Monte Carlo integration Quality of Sampling Quasi-Monte Carlo Pseudorandom Pseudorandom number generation Other distributions Limitations Multivariate distributions Markov Chains Markov chains Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 4. Probability of Crossing a Line Monte Carlo & MCMC Xin-She Yang Since p ≈ n/N ≈ 2L/πd, we have Monte Carlo 2N L Estimating π Buffon’s π≈ · . problem n d Probability Monte Carlo Monte Carlo integration Lazzarini (1901): L = 5d/6, N = 3408, n = 1808, so Quality of Sampling Quasi-Monte 2 × 3408 5 Carlo π≈ · ≈ 3.14159290. Pseudorandom 1808 6 Pseudorandom number generation Other distributions Too accurate?! Is this right? What happens when n = 1809? Limitations √ Multivariate distributions Errors ∼ 1/ N ∼ 2%. Markov Chains Markov chains Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 5. Monte Carlo Methods Monte Carlo & MCMC Everyone has used Monte Carlo methods in some way ... Xin-She Yang Monte Carlo Estimating π Buffon’s problem Probability Monte Carlo Monte Carlo integration Quality of Sampling Quasi-Monte Carlo Pseudorandom Pseudorandom number generation Other distributions Limitations Multivariate distributions Markov Measure temperatures, choose a product, ... Chains Markov chains Markov chains Taste soup, wine ... A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 6. Monte Carlo Integration Monte Carlo & MCMC n 1 Xin-She Yang I= fdv = V fi + O(ǫ), Ω N Monte Carlo i =1 Estimating π 1 N 2 √ Buffon’s problem N i =1 fi − µ2 Probability ǫ∼ ∼ O(1/ N). Monte Carlo N Monte Carlo integration Quality of Sampling Quasi-Monte Carlo Pseudorandom Pseudorandom number generation Other distributions Limitations Multivariate distributions Markov Chains Markov chains Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 7. Importance and Quality of the Samples Monte Carlo & MCMC Higher dimensions – even more challenging! Xin-She Yang I= ... f (u, v , ..., w ) du dv ...dw . Monte Carlo Estimating π Buffon’s problem √ Probability Errors ∼ 1/ N Monte Carlo Monte Carlo integration Quality of Higher dimensional integrals Sampling Quasi-Monte Carlo How to distribute these sampling points? Pseudorandom Pseudorandom number Regular grids: E ∼ O(N −2/d ) in d ≥ 4 dimensions (not generation Other enough!) distributions Limitations Multivariate distributions Strategies: importance sampling, Latin hypercube, ... Markov Chains Markov chains Any other ways? Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 8. Quasi-Monte Carlo Methods Monte Carlo & MCMC In essence, that is to distribute (consecutive) sampling points Xin-She Yang as far away as possible, using quasi-random or low-discrepancy numbers (not pseudo-random)... Halton, Sobol, Corput ... Monte Carlo Estimating π Buffon’s For example, Corput express an integer n as a prime base b problem Probability m Monte Carlo Monte Carlo n= aj (n)b j , aj ∈ {0, 1, 2, ..., b − 1}. integration Quality of j=0 Sampling Quasi-Monte Carlo Then, it is reversed or reflected Pseudorandom m Pseudorandom 1 number generation φb (n) = aj (n) . Other b j+1 distributions j=0 Limitations Multivariate distributions For example, 0, 1, 2, ..., 15 =⇒ 0, 1 , 1 , 3 , 1 , ..., 15 . 2 4 4 8 16 Markov Chains Markov chains Errors ∼ O(1/N) Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 9. Pseudorandom numbers – by deterministic sequences Monte Carlo & MCMC Uniform Distributions: Xin-She Yang di = (adi −1 + c) mod m, Monte Carlo Estimating π Classic IBM generator: Buffon’s m = 231 (strong correlation!) problem Probability a = 65539, c = 0, Monte Carlo Monte Carlo integration Quality of In fact, correlation coefficient is 1! Sampling Quasi-Monte Better choice (old Matlab): Carlo Pseudorandom a = 75 = 16807, c = 0, m =31 −1 = 2, 147, 483, 647. Pseudorandom number generation Other If scaled by m, all numbers are in [1/m, (m − 1)/m]. distributions Limitations New Matlab: [ǫ, 1 − ǫ], ǫ = 2−53 ≈ 1.1 × 10−16 . Multivariate distributions Markov Chains IEEE: 64-bits system = 53 bits for a signed fraction in base 2 Markov chains Markov chains and 11 bits for a signed exponent. A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 10. Other Distributions Monte Carlo & MCMC Inverse transform method, rejection method, Mersenne twister, Xin-She Yang ..., Markov chain Monte Carlo. 2 √1 e −u /2 , Monte Carlo Estimating π Standard norm distribution: p(u) = 2π Buffon’s v −u 2 /2 du CDF: Φ(v ) = √1 = 1 v 2 [1 + ( 2 )], problem −∞ e Probability √ 2π Monte Carlo Monte Carlo √ integration Quality of v = Φ−1 (u) = 2 erf−1 (2u − 1), Sampling 1200 10000 Quasi-Monte Carlo 1000 8000 Pseudorandom Pseudorandom 800 number 6000 generation 600 Other distributions 4000 Limitations 400 Multivariate distributions 2000 200 Markov Chains 0 0 0.2 0.4 0.6 0.8 1 0 -6 -4 -2 0 2 4 6 Markov chains Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 11. Transform method: Limitations Monte Carlo & MCMC Xin-She Yang Monte Carlo √ Estimating π v = Φ−1 (u) = 2 erf−1 (2u − 1), Buffon’s problem Probability Monte Carlo Monte Carlo √ integration π πx 3 7π 2 x 5 127π 3 x 7 Quality of Sampling erf−1 (x) = x+ + + + ··· . Quasi-Monte Carlo 2 12 480 40320 Pseudorandom Pseudorandom number generation Not so easy to calculate! Other distributions Limitations Sometimes, the inverse may not be possible. Multivariate distributions Markov Chains Markov chains Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 12. Multivariate Distributions Monte Carlo & MCMC Bivariate normal distributions: Xin-She Yang 1 −(v1 +v2 )/2 2 2 p(v1 , v2 ) = e . Monte Carlo 2π Estimating π Buffon’s Box-M¨ller method: from u1 , u2 ∼ uniform distributions u problem Probability Monte Carlo Monte Carlo v1 = −2 ln u1 cos(2πu2 ), v2 = −2 ln u1 sin(2πu2 ). integration Quality of Sampling Quasi-Monte Carlo Problems Pseudorandom Pseudorandom number Difficult to calculate the inverse in most cases generation Other (sometimes, even impossible!). distributions Limitations Multivariate Other methods (e.g., rejection method) are inefficient. distributions Markov Chains Markov chains So – the Markov chain Monte Carlo (MCMC) way! Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 13. Random Walk down the Markov Chains Monte Carlo & MCMC Random walk – A drunkard’s walk: Xin-She Yang ut+1 = µ + ut + wt , Monte Carlo Estimating π where wt is a random variable, and µ is the drift. Buffon’s problem For example, wt ∼ N(0, σ 2 ) (Gaussian). Probability Monte Carlo Monte Carlo 25 10 integration Quality of 20 Sampling 5 Quasi-Monte Carlo 15 0 Pseudorandom 10 Pseudorandom -5 number 5 generation -10 Other 0 distributions Limitations -5 -15 Multivariate distributions -10 -20 0 100 200 300 400 500 -15 -10 -5 0 5 10 15 20 Markov Chains Markov chains Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 14. Markov Chains Monte Carlo & MCMC Xin-She Yang Markov chain: the next state only depends on the current state and the transition probability. Monte Carlo Estimating π Buffon’s problem Probability P(i , j) ≡ P(Vt+1 = Sj V0 = Sp , ..., Vt = Si ) Monte Carlo Monte Carlo integration Quality of = P(Vt+1 = Sj Vt = Sj ), Sampling Quasi-Monte Carlo =⇒ Pij πi∗ = Pji πj∗ , π ∗ = stionary probability distribution. Pseudorandom Pseudorandom number generation Other Examples: Brownian motion distributions Limitations Multivariate distributions ui +1 = µ + ui + ǫi , ǫi ∼ N(0, σ 2 ). Markov Chains Markov chains Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 15. Markov Chains Monte Carlo & MCMC Monopoly (board games) Xin-She Yang Monte Carlo Estimating π Buffon’s problem Probability Monte Carlo Monte Carlo integration Quality of Sampling Quasi-Monte Carlo Pseudorandom Pseudorandom number generation Other distributions Limitations Multivariate distributions Markov Chains Monopoly Animation Markov chains Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 16. A Famous $Billion Markov Chain – PageRank Monte Carlo & MCMC Xin-She Yang Google PageRank Algorithm (by Page et al., 1997) Monte Carlo Estimating π Buffon’s problem Probability Monte Carlo Monte Carlo integration Quality of Sampling Quasi-Monte Carlo Pseudorandom Pseudorandom number generation Other distributions Limitations Multivariate distributions Billions of web pages: pages = states, link probability ∼ 1/t Markov Chains where t ≈ the expectation of the number of clicks. Markov chains Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 17. Googling as a Markov Chain (t) Monte Carlo (t+1) 1−α Ranki & MCMC Rankj = +α , Xin-She Yang N B(pi ) pi ∈Ω(pi ) Monte Carlo Estimating π where N=number of pages, B(pi ) is the link bounds of page (t=0) Buffon’s problem pi , and α=a ranking factor (≈ 0.85). Ranki = 1/N. Probability T Monte Carlo Monte Carlo Let R = Rank1 , ..., RankN , and L(pi , pj ) = 0 if no links integration =⇒ Quality of Sampling Quasi-Monte Carlo (1 − α) L(p1 , p1 ) ... L(p1 , pj ) ...L(p1 , pN ) . . Pseudorandom . Pseudorandom 1 . R= . + α L(pi , p1 ) L(pi , pj ) ...L(pi , pN ) R, number generation N . . .. Other . . distributions . Limitations (1 − α) L(pN , p1 ) ... L(pN , pN ) Multivariate distributions where N L(pi , pj ) = 1. Google Matrix (stochastic, sparse). Markov Chains i =1 Markov chains Markov chains =⇒ a stationary probability distribution R (update monthly). A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 18. Markov Chain Monte Carlo Monte Carlo & MCMC Xin-She Yang Monte Carlo Landmarks: Monte Carlo method (1930s, 1945, from 1950s) Estimating π Buffon’s e.g., Metropolis Algorithm (1953), Metropolis-Hastings (1970). problem Probability Monte Carlo Monte Carlo Markov Chain Monte Carlo (MCMC) methods – A class of integration Quality of methods. Sampling Quasi-Monte Carlo Really took off in 1990s, now applied to a wide range of areas: Pseudorandom Pseudorandom physics, Bayesian statistics, climate changes, machine learning, number generation Other finance, economy, medicine, biology, materials and engineering distributions Limitations ... Multivariate distributions Markov Chains Markov chains Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 19. Metropolis-Hastings Monte Carlo & MCMC The Metropolis-Hastings algorithm algorithm: Xin-She Yang 1 Begin with any initial θ0 at time t ← 0 such that Monte Carlo p(θ0 ) > 0 Estimating π Buffon’s problem 2 Generating a candidate sample θ∗ ∼ q(θt , .) from a Probability Monte Carlo proposal distribution Monte Carlo integration Quality of 3 Evaluate the acceptance probability α(θt , θ∗ ) given by Sampling Quasi-Monte Carlo p(θ∗ )q(θ∗ , θt ) Pseudorandom α = min ,1 Pseudorandom number p(θt )q(θt , θ∗ ) generation Other distributions 4 Generate a uniformly-distributed random number u ∼ Limitations Multivariate Unif[0, 1], and accept θ∗ if α ≥ u. That is, if α ≥ u then distributions Markov θt+1 ← θ∗ else θt+1 ← θt Chains Markov chains 5 Increase the counter or time t ← t + 1, and go to step 2 Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 20. Mixture distribution: A distribution with known mean and variance. Monte Carlo & MCMC f (x|µ, σ 2 ) = K αi pi (x|µi , σi2 ), i =i K i =1 αi = 1. Xin-She Yang E.g., α1 = α2 = 1/2, µ1 = 2, µ2 = −2 and σ1 = σ2 = 1. 6 Monte Carlo 4 Estimating π 2 Buffon’s problem 0 Probability -2 Monte Carlo Monte Carlo -4 0 2000 4000 6000 8000 10000 integration Quality of Sampling 0.2 Quasi-Monte 0.18 Carlo 0.16 Pseudorandom Pseudorandom 0.14 number generation 0.12 Other 0.1 distributions Limitations 0.08 Multivariate distributions 0.06 0.04 Markov Chains 0.02 Markov chains 0 Markov chains −6 −4 −2 0 2 4 6 A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 21. When to Stop the Chain Monte Carlo & MCMC As the MCMC runs, convergence may be reached Xin-She Yang When does a chain converge? When to stop the chain ... ? Monte Carlo Estimating π Are the samples correlated ? Buffon’s problem Probability 0 Monte Carlo Monte Carlo integration 100 Quality of Sampling 200 Quasi-Monte Carlo Pseudorandom 300 Pseudorandom number 400 generation Other distributions 500 Limitations Multivariate distributions 600 Markov Chains 0 100 200 300 400 500 600 700 800 900 Markov chains Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 22. A Long Single Chain or Multiple Short Chains? Monte Carlo & MCMC Xin-She Yang Monte Carlo When a Markov chain will converge in practice? If it has Estimating π Buffon’s converged, what does it mean? problem Probability Monte Carlo Is a very long chain really good enough (from statistical Monte Carlo integration point of view)? Quality of Sampling Quasi-Monte How long is long enough? Carlo Pseudorandom Are multiple chains better? Pseudorandom number generation How to improve the sampling efficiency and/or mixing Other distributions properties ? Limitations Multivariate distributions Markov Chains Markov chains Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 23. Simulated Tempering Monte Carlo & MCMC Simulated annealing: temperature T from high to low. Xin-She Yang Simulated tempering: raise T to a higher value, reduce to low. Monte Carlo Estimating π Buffon’s πτ = π(x)1/τ , πτ →∞ → 1, as τ → ∞. problem Probability Monte Carlo The basic idea is to reduce from a very high τ to τ0 = 1. Monte Carlo integration Quality of Sampling flatten Quasi-Monte Carlo =⇒ Pseudorandom π≥ 0 πτ = π(x)1/τ Pseudorandom number generation Other distributions Limitations Tempering Multivariate distributions Use flattened (near uniform) distributions as Markov Chains proposals/candidates to produce high quality samplings. Markov chains Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 24. Sampling: Forward or Backward? Which Way? Monte Carlo & MCMC Is this the only way? Xin-She Yang No! – Coupling from the Past & Metaheuristics Monte Carlo Estimating π Buffon’s problem Probability Monte Carlo If we go backward along the chain, any advantages? If so, how? Monte Carlo integration Quality of Sampling Is there a universally efficient sampling tool for drawing Quasi-Monte Carlo samples in general? Pseudorandom Pseudorandom number No! – No-free-lunch theorem (Wolpert & Macready, 1997) generation Other distributions The aim of the research is to find the best algorithm(s) for a Limitations Multivariate distributions given/specific problem/distribution. Markov Chains Markov chains Also Metaheuristics (very promosing). Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC
- 25. Thank you Monte Carlo & MCMC Xin-She Yang References Monte Carlo Gamerman D., Markov Chain Monte Carlo, Chapman & Hall/CRC, (1997). Estimating π Corcoran J. and Tweedie R., Perfect sampling ... Jour. Stat. Plan. Infer., 104, 297 (2002). Buffon’s problem Cox M., Forbes A. B., Harris P. M., Smith I., Classification and solution of regression ..., NPL SSfM Probability Report, (2004). Monte Carlo Propp J. & Wilson D., Exact sampling ..., Random Stru. Alg., 9, 223 (1996). Monte Carlo integration Yang X. S., Nature-Inspired Metaheuristic Algorithms, Luniver Press, (2008). Quality of Sampling Yang X. S., Introduction to Computational Mathematics, World Scientific, (2008). Quasi-Monte Yang X. S., Engineering Optimization: An Introduction with Metaheuristic Applications, Wiley, Carlo (2010). Pseudorandom Pseudorandom number generation Other distributions Acknowledgement: Limitations Multivariate EPSRC, SSfM, NPL, CUED, and London Maths Society. distributions Markov Thank you! Chains Markov chains Markov chains A Famous Markov Chain Xin-She Yang Monte Carlo & MCMC