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Small pieces
loosely joined
Getting louse research
on the Web



Vincent S. Smith
Dave Roberts & Simon Rycroft
Phthiraptera.org
                             Pros
                             • High quality
                             • Bespoke
                             • Digital „hub‟



                             Cons
                             • 1 Person
                             • Limited updates
                             • Taxonomy focus
                             • No digital services
                             • No „ownership‟
                             • Slow to build
   http://phthiraptera.org
A common experience
 Examples from the NHM, London




      Lepidoptera                        British Fleas

                        Chalcid Wasps                    Martian Meteorites




   Spanish Sandflies                     Solanaceae

                       Loch Ness Worms                     Bumble bees
Explosion of Web (2.0) tools
 Putting you in control
What is a Scratchpad?
A website for you & your community




       1                       2                 3
   Your data              Uploaded &   “Published” & reviewed
                            tagged           on your site
What is a Scratchpad?
A website for you & your community




       1                       2                 3
   Your data              Uploaded &   “Published” & reviewed
                            tagged           on your site


    Fast                 Intuitive       Fit for use
Scratchpads
 A multi-site implementation of Drupal




              http://scratchpads.eu
Scratchpad Application Form
 Free to any individual or community
Flexible Template Site
 With easy navigation
An ecosystem of communities
                               Sites: 150+
                               Users: 2000+
                               Pages: 266k
                               March 2007




                       Circa 2 new sites/wk.
Phthiraptera.org
 Reborn as a Scratchpad




      http://phthiraptera.myspecies.info
Phthiraptera.org
 Your content available to edit by you…




                                   e.g. Your research profile
Phthiraptera.org
 Content Summary

                   Data so far…
                   • Phthirapterists (296)
                   • Lice (8,040)
                   • Birds (5,640)
                   • Mammals (6,561)
                   • Louse-host associations (12,472)
                   • Bibliographic data (9,759)
                   • Institutional collections (62)

                   Data to follow…
                   • Images (7,650, 440 taxa)
                   • PDF attachments (4,084)
                   • Phylogenies (30+)

                   Will get prettier
Phthiraptera.org
 The future


                   That’s all folks…
                   • It‟s a community based site
                   • Needs you to submit data
                   • Needs a senior editor
                   • Its your site, not mine
Louse Scratchpad Workshop
 Tuesday 12-13.00, June 15th

                               To cover…
                               • An overview of what‟s possible
                               • Accounts & logging in
                               • Taxonomy
                               • Louse - host associations
                               • Bibliographies
                               • E-mail forums
                               • Phylogenies

 THIS SITE NEEDS YOU!          No time for…
                               • Private groups
                               • Character projects
                               • Publications
                               • Many more things…
European Distributed Institute of Taxonomy
  EDIT - http://www.e-taxonomy.eu/




 • Network of 27 partners
                            “to integrate taxonomic research and
 • €12M Euros
                            improve the production of knowledge”
 • Feb. 2006 - Feb. 2011
ViBRANT
          INFRA-2010-1.2.3 (VRC)
          17 Partners, 9 countries
          €4.75M


          • Distribute hosting infrastructure
          • Web services on major data types
          • Registry of sites and data services
          • Common data portal
          • New services (keys / phylog.)
          • Vocab. / ontology site (GBIF)
          • User support
          • Sociological research

          • Formal publishing
BMC Bioinformatics




                     BMC Bioinformatics 2009, 10 (Suppl 14)
                     S6doi:10.1186/1471-2105-10-S14-S6
                            Published: 10 November 2009
Questions?
Small pieces loosely joined: getting louse research online.
Small pieces loosely joined: getting louse research online.

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Small pieces loosely joined: getting louse research online.

  • 1. Small pieces loosely joined Getting louse research on the Web Vincent S. Smith Dave Roberts & Simon Rycroft
  • 2. Phthiraptera.org Pros • High quality • Bespoke • Digital „hub‟ Cons • 1 Person • Limited updates • Taxonomy focus • No digital services • No „ownership‟ • Slow to build http://phthiraptera.org
  • 3. A common experience Examples from the NHM, London Lepidoptera British Fleas Chalcid Wasps Martian Meteorites Spanish Sandflies Solanaceae Loch Ness Worms Bumble bees
  • 4. Explosion of Web (2.0) tools Putting you in control
  • 5. What is a Scratchpad? A website for you & your community 1 2 3 Your data Uploaded & “Published” & reviewed tagged on your site
  • 6. What is a Scratchpad? A website for you & your community 1 2 3 Your data Uploaded & “Published” & reviewed tagged on your site Fast Intuitive Fit for use
  • 7. Scratchpads A multi-site implementation of Drupal http://scratchpads.eu
  • 8. Scratchpad Application Form Free to any individual or community
  • 9. Flexible Template Site With easy navigation
  • 10. An ecosystem of communities Sites: 150+ Users: 2000+ Pages: 266k March 2007 Circa 2 new sites/wk.
  • 11.
  • 12. Phthiraptera.org Reborn as a Scratchpad http://phthiraptera.myspecies.info
  • 13. Phthiraptera.org Your content available to edit by you… e.g. Your research profile
  • 14. Phthiraptera.org Content Summary Data so far… • Phthirapterists (296) • Lice (8,040) • Birds (5,640) • Mammals (6,561) • Louse-host associations (12,472) • Bibliographic data (9,759) • Institutional collections (62) Data to follow… • Images (7,650, 440 taxa) • PDF attachments (4,084) • Phylogenies (30+) Will get prettier
  • 15. Phthiraptera.org The future That’s all folks… • It‟s a community based site • Needs you to submit data • Needs a senior editor • Its your site, not mine
  • 16. Louse Scratchpad Workshop Tuesday 12-13.00, June 15th To cover… • An overview of what‟s possible • Accounts & logging in • Taxonomy • Louse - host associations • Bibliographies • E-mail forums • Phylogenies THIS SITE NEEDS YOU! No time for… • Private groups • Character projects • Publications • Many more things…
  • 17. European Distributed Institute of Taxonomy EDIT - http://www.e-taxonomy.eu/ • Network of 27 partners “to integrate taxonomic research and • €12M Euros improve the production of knowledge” • Feb. 2006 - Feb. 2011
  • 18. ViBRANT INFRA-2010-1.2.3 (VRC) 17 Partners, 9 countries €4.75M • Distribute hosting infrastructure • Web services on major data types • Registry of sites and data services • Common data portal • New services (keys / phylog.) • Vocab. / ontology site (GBIF) • User support • Sociological research • Formal publishing
  • 19. BMC Bioinformatics BMC Bioinformatics 2009, 10 (Suppl 14) S6doi:10.1186/1471-2105-10-S14-S6 Published: 10 November 2009