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1
Think Big, Start Smart, Scale Fast
Dato Conference
Data Matching and Deduplication
using Dato Toolkits
July 21st, 2015
Guillermo Breto Rangel, PhD
2
Entity Resolution: Multiple Definitions
2
(ER)
Entity Resolution
Extract, match and disambiguate
entity records in data.
3
Extract, match and disambiguate entity records in data.
Entity Resolution: Real World Entity
Matching real world entities with profiles, mentions...
Yo
u
Facebook account(s)
LinkedIn profile(s)
Tweets
Google Searches
Many recordsUnique Identities
…...…...
......ER
4
Entity Resolution: Use Cases
4
◆ Network Analysis
◆ Vocabulary Normalization:
Different organizations report
different names for same
entities
◆ Network Security: Finding user
actions/intents
◆ Data Cleaning: removing
duplicated records
◆ Metadata enrichment: records
when matched append
metadata to the entity.
5
Entity Resolution: Challenges
5
◆ Missing Values
◆ Data entry errors
◆ Abbreviations and formatting
◆ Data volume
◆ Variety of raw data sources
o free text, semi-structured, streaming
◆ Data integration from multiple sources
◆ Preprocessing
◆ Normalization
◆ Choosing similarity metrics
6
Dataset: Dbpedia/Amazon-Google Products
6
Putting a schema to Wikipedia
Crowd-sourced community project
Queries against Wikipedia
Data Match data sets on the Web to Wikipedia data
A set of triples → <dbpedia:Luc_Besson> <dbpedia-
owl:spouse><dbpedia:Milla_Jovovich>
Matching Amazon Products and
Google Products
Deich Library and
7
Preprocessing: Steps
7
1) Extract tokens
2) Clean triplets
3) Pivot table
4) Select relevant features
5) Normalization
6) Choosing similarity metrics
8
Algorithm: Nearest Neighbors
8
● The entity resolution problem is approached as a network problem
○ Nodes: entity records
○ Edges: similarity measures
● Define distance between entities to find the nearest neighbors.
Composite distances could be built using euclidean, squared
euclidean, levenshtein, Jaccard, Manhattan, cosine, dot product
● Compute the distance between all entities and find the nearest
neighbors
● Duplicates are the connected components of the graph which are
labeled as an entity
● Some parameters to keep in mind are:
○ Grouping_features
○ k (number of neighbors to compare)
○ Radius (the distance threshold)
9
Results:
9
The benchmark results can be found at:
https://github.com/cubreto/dataDeduplication
10
Lessons Learned:
10
◆Most of the time spent on preprocessing
◆Hard to define the distance threshold
◆Weighting the composite distance
◆Data volume
◆Dealing with missing values
◆Tuning the parameters
◆Finding exact matches
11
Some Resources/Bibliography
11
◆ Ricardo Vasquez Sierra, PhD: Senior Data Scientist
from Ooyala
◆ Kevin Glynn, MS: Data Scientist and Khan Academy
Instructor
◆ Vince Gonzalez: MapR Software Engineer
◆ Alexey Svyatkovskiy, PhD: BigData Scientist
Princeton University
◆ Ashwin Machanavajjhala, PhD: Professor of
Computer Science, Duke University
◆ Lise Getoor, PhD: Professor of Computer Science,
UC Santa Cruz
o KDD Tutorial on Entity Resolution in Big Data
o Deduplication and Group Detection using Links, Indrajit
Bhattacharya and Lise Getoor, The 10th ACM SIGKDD Workshop
on Link Analysis and Group Detection (LinkKDD-04).
o Collective Entity Resolution in Relational Data, Indrajit
Bhattacharya and Lise Getoor, ACM Transactions on Knowledge
Discovery from Data (ACM-TKDD), 2007
◆ The Dato Team
◆ My colleagues at Think Big

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Beyond Kaggle: Solving Data Science Challenges at Scale

  • 1. 1 Think Big, Start Smart, Scale Fast Dato Conference Data Matching and Deduplication using Dato Toolkits July 21st, 2015 Guillermo Breto Rangel, PhD
  • 2. 2 Entity Resolution: Multiple Definitions 2 (ER) Entity Resolution Extract, match and disambiguate entity records in data.
  • 3. 3 Extract, match and disambiguate entity records in data. Entity Resolution: Real World Entity Matching real world entities with profiles, mentions... Yo u Facebook account(s) LinkedIn profile(s) Tweets Google Searches Many recordsUnique Identities …...…... ......ER
  • 4. 4 Entity Resolution: Use Cases 4 ◆ Network Analysis ◆ Vocabulary Normalization: Different organizations report different names for same entities ◆ Network Security: Finding user actions/intents ◆ Data Cleaning: removing duplicated records ◆ Metadata enrichment: records when matched append metadata to the entity.
  • 5. 5 Entity Resolution: Challenges 5 ◆ Missing Values ◆ Data entry errors ◆ Abbreviations and formatting ◆ Data volume ◆ Variety of raw data sources o free text, semi-structured, streaming ◆ Data integration from multiple sources ◆ Preprocessing ◆ Normalization ◆ Choosing similarity metrics
  • 6. 6 Dataset: Dbpedia/Amazon-Google Products 6 Putting a schema to Wikipedia Crowd-sourced community project Queries against Wikipedia Data Match data sets on the Web to Wikipedia data A set of triples → <dbpedia:Luc_Besson> <dbpedia- owl:spouse><dbpedia:Milla_Jovovich> Matching Amazon Products and Google Products Deich Library and
  • 7. 7 Preprocessing: Steps 7 1) Extract tokens 2) Clean triplets 3) Pivot table 4) Select relevant features 5) Normalization 6) Choosing similarity metrics
  • 8. 8 Algorithm: Nearest Neighbors 8 ● The entity resolution problem is approached as a network problem ○ Nodes: entity records ○ Edges: similarity measures ● Define distance between entities to find the nearest neighbors. Composite distances could be built using euclidean, squared euclidean, levenshtein, Jaccard, Manhattan, cosine, dot product ● Compute the distance between all entities and find the nearest neighbors ● Duplicates are the connected components of the graph which are labeled as an entity ● Some parameters to keep in mind are: ○ Grouping_features ○ k (number of neighbors to compare) ○ Radius (the distance threshold)
  • 9. 9 Results: 9 The benchmark results can be found at: https://github.com/cubreto/dataDeduplication
  • 10. 10 Lessons Learned: 10 ◆Most of the time spent on preprocessing ◆Hard to define the distance threshold ◆Weighting the composite distance ◆Data volume ◆Dealing with missing values ◆Tuning the parameters ◆Finding exact matches
  • 11. 11 Some Resources/Bibliography 11 ◆ Ricardo Vasquez Sierra, PhD: Senior Data Scientist from Ooyala ◆ Kevin Glynn, MS: Data Scientist and Khan Academy Instructor ◆ Vince Gonzalez: MapR Software Engineer ◆ Alexey Svyatkovskiy, PhD: BigData Scientist Princeton University ◆ Ashwin Machanavajjhala, PhD: Professor of Computer Science, Duke University ◆ Lise Getoor, PhD: Professor of Computer Science, UC Santa Cruz o KDD Tutorial on Entity Resolution in Big Data o Deduplication and Group Detection using Links, Indrajit Bhattacharya and Lise Getoor, The 10th ACM SIGKDD Workshop on Link Analysis and Group Detection (LinkKDD-04). o Collective Entity Resolution in Relational Data, Indrajit Bhattacharya and Lise Getoor, ACM Transactions on Knowledge Discovery from Data (ACM-TKDD), 2007 ◆ The Dato Team ◆ My colleagues at Think Big