Introductory slides for the MakerBay/ODHK #ZikaHackathon

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The document discusses the lack of data available about the Zika virus and proposes several open approaches to address this issue, including making outbreak research openly accessible, tracking mosquito vectors through crowdsourcing and models, expanding genomic surveillance of the virus, and developing low-cost paper diagnostics and open source hardware for monitoring and control.

Saúde e medicina

Zika: a “data gap” issue.
https://www.washingtonpost.com/world/the_americas/brazil-considers-reforming-biosecurity-law-amid-
criticism/2016/02/05/ba2108ba-cc80-11e5-b9ab-26591104bb19_story.html

Closed Data Kills: Need Open Approaches
Climate change, global hunger, pollution, cancer,
disease outbreaks…
http://www.nature.com/news/data-sharing-make-outbreak-research-open-access-1.16966

Know your enemy
https://en.wikipedia.org/wiki/Aedes_albopictus

Dengue virus: Singapore
http://www.dengue.gov.sg/subject.asp?id=74

Dengue virus: Guangzhou
http://www.gdwst.gov.cn/a/yiqingxx/

Dengue virus: Hong Kong
http://www.chp.gov.hk/en/notifiable1/10/26/43.html

Model/track vectors?
https://www.kaggle.com/c/predict-west-nile-virus

Vector tracking: Hong Kong
http://www.fehd.gov.hk/english/safefood/dengue_fever/
52 locations = >98% of
HK not covered.

Crowdsourced approaches?
http://www.ondeestaoaedes.com.br/

Genomics approaches?
Get more data with portable genome labs? Can we get nanopores?
http://www.nature.com/nature/journal/v530/n7589/full/nature16996.html

Genomics approaches?
http://ebola.nextstrain.org/

Genomics approaches?
http://ebola.nextstrain.org/
Approaching 20+ genomes available for analysis (3 published)

OSHW approaches
http://www.instructables.com/id/Mosquito-Killing-Ovitrap/

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Introductory slides for the MakerBay/ODHK #ZikaHackathon

2. Zika: a “data gap” issue. https://www.washingtonpost.com/world/the_americas/brazil-considers-reforming-biosecurity-law-amid- criticism/2016/02/05/ba2108ba-cc80-11e5-b9ab-26591104bb19_story.html

3. Closed Data Kills: Need Open Approaches Climate change, global hunger, pollution, cancer, disease outbreaks… http://www.nature.com/news/data-sharing-make-outbreak-research-open-access-1.16966

4. Know your enemy https://en.wikipedia.org/wiki/Aedes_albopictus

5. Zika virus: to date

6. Dengue virus: to date

7. Dengue virus: Singapore http://www.dengue.gov.sg/subject.asp?id=74

8. Dengue virus: Guangzhou http://www.gdwst.gov.cn/a/yiqingxx/

9. Dengue virus: Hong Kong http://www.chp.gov.hk/en/notifiable1/10/26/43.html

10. Model/track vectors? https://www.kaggle.com/c/predict-west-nile-virus

11. Vector tracking: Hong Kong http://www.fehd.gov.hk/english/safefood/dengue_fever/ 52 locations = >98% of HK not covered.

12. Crowdsourced approaches? http://www.ondeestaoaedes.com.br/

13. Genomics approaches? Get more data with portable genome labs? Can we get nanopores? http://www.nature.com/nature/journal/v530/n7589/full/nature16996.html

14. Genomics approaches? http://ebola.nextstrain.org/

15. Genomics approaches? http://ebola.nextstrain.org/ Approaching 20+ genomes available for analysis (3 published)

16. Paper diagnostics?

17. OSHW approaches http://www.instructables.com/id/Mosquito-Killing-Ovitrap/