8. Log Fold
Change
3 DPI vs Pre
=
3 days post
infection
Pre Infection
P-value
depends on
number of
individuals
variance of
individual
log ratios
magnitude
of log fold
change
10. Pre
3 DPI
vs
Pre
6 DPI
vs
Pre 8 DPI
vs
Pre
10 DPI
vs
Pre
12 DPI
vs
Pre
Probes with
significant
p-values at
3 DPI
vs
Pre
2
11. 2
Pre
3 DPI
vs
Pre
6 DPI
vs
Pre 8 DPI
vs
Pre
10 DPI
vs
Pre
12 DPI
vs
Pre
Probes with
significant
p-values at
3 DPI
vs
Pre
and
sustained
log fold
changes