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Macromolecules
Polymerization
Carbohydrates
Macromolecules

   Macro: large
   Macromolecules are built by combining a
    number of smaller subunits
   Monomer: a single subunit
   Polymer: larger units made by covalent
    bonds between monomers
Building Macromolecules

   A large variety of polymers can be built from
    a few monomers
   Cells can create many different
    macromolecules from a small number of
    starting materials by arranging them in
    different combinations
Analogy: The Asian Kitchen
“Fourteen simple basics, augmented by general pantry staples such
as sugar, salt, cornstarch, chicken broth, rice, oil, and black pepper,
one can take most fresh ingredients and create a plethora of dishes
from every province of China.”   http://www.tigersandstrawberries.com/2007/02/21/staple-ingredients-of-the-chinese-pantry/
                                 http://nookandpantry.blogspot.ca/2008/02/chinese-pantry-part-i-what-you-need-to.html
Analogy: Alphabets

   26 letters of the alphabet makes over 125,000
    words in the English language
    http://oxforddictionaries.com/words/how-many-words-are-there-in-the-english-language


   4 nitrogen bases, A T C G, in DNA makes up
    our entire genome
Metabolism

   The process by which macromolecules are
    built from monomers or disassembled is
    metabolism
   Metabolism: the sum of all chemical reactions
    that occur in a living organism
   Classified into 2 types:
     Anabolism: reactions that build up molecules
     Catabolism: reactions that breakdown molecules
Anabolism Reactions

   Condensation (dehydration synthesis):
    monomers are covalently linked to make a
    polymer by removing water




                                      Text page 63, Fig. 5.2a.
Catabolism Reactions

   Hydrolysis: covalent bonds connecting
    monomers in a polymer are disassembled by
    the addition of water
Macromolecules

Four major classes are:
1. Carbohydrates
2. Lipids
3. Proteins
4. Nucleic acids
What you need to know…

1.   Structure of the basic unit (e.g. monomers)
     that builds up the macromolecule
2.   How macromolecules react to form larger
     molecules
3.   How the larger molecules are broken down
     into basic units
4.   Functions of the molecules in living
     organisms
Carbohydrate

   Carbo = carbon (C)
   Hydrate = water (H2O)
   Carbohydrates are multiples of the basic
    formula: CH2O
   Example: A carbohydrate with 6 carbons
     CH2O x 6 = C6H12O6 = hexose (e.g. glucose)
Monomer: Monosaccharides

   Mono = 1
   Saccharide = sugar
   Ranges from 3 to 7 carbons in length
   Most names for sugars end in –ose
     Hexose: glucose, fructose
Function of Monosaccharide

   FUEL: short-term energy storage
   building materials
   cellular communication
Monosaccharide Classification

A. Number of carbons in the backbone
 Triose: 3C
 Pentose: 5C
 Hexose: 6C


B. Location of the carbonyl group (-C=O)
 Aldose: carbonyl group at the end (aldehyde)
 Ketose: carbonyl group in the middle (ketone)
Fig. 5.3
Numbering System

   Where is carbon 1 in each molecule? Explain
    how the choice was made.
Linear and Ring forms
   In aqueous solutions, hexose sugars form rings
   C=O group will react with the OH group on C5 to
    form a stable 5 or 6 sided ring structure
   Count the number of C, H, O in the ring
    structure. Are any atoms lost?
Practice: Form Ring Structures
 Build the linear molecule. Rearrange the bonds to get
  the final ring form. Hint: it involves the functional group.
 In your notes, draw an arrow to show the 2 atoms in the
  linear structure that connects to form the ring. Number
  the carbons in both the linear and ring structures.
Forming Ring Structures

   Fructose
Ring forms of hexose sugars

   Question: How do you distinguish galactose,
    mannose and fructose from glucose? Refer
    to specific carbon numbers.

    Glucose Galactose Mannose Fructose
Ring forms of hexose sugars

Glucose   Galactose   Mannose   Fructose
Ring forms of hexose sugars

Glucose   Galactose    Mannose      Fructose




          Carbon 4 –   Carbon 2 –
          OH is up     OH is up
Ring forms of hexose sugars

Glucose   Galactose    Mannose      Fructose




          Carbon 4 –   Carbon 2 –   5 sided ring
          OH is up     OH is up
Anomeric Carbon

                        The C of the C=O
                         group is called an
                         anomeric carbon
         -glucose
                        Depending if the OH
                         group attaches from
                         the top or bottom,
                         different ring
                         structure is formed.
          -glucose
Anomeric Carbon

   The different orientation of the resulting OH
    group have different names
   Alpha (α) = OH group below ring
   Beta (β) = OH group above ring
Saccharide Condensation Reaction

   Which functional
    group(s) participates
    in this reaction?
   What is the name of
    the new functional
    group formed (red
    box)?
Linkage Naming

To name the linkage:
 Identify whether the
  anomeric carbon in
  the link is α or β
 Number the carbons
  and determine the 2
  that are involved in
  the linkage
 Example: α-1,4
  linkage
Linkage: Anomeric Carbon
   α and β orientation of the anomeric carbon
    result in the formation of different types of
    bonds in polymers




        non-digestible            digestible
Dissaccharide

   Di = two
   Condensation reaction of 2 monosaccharides
    forming an ether bond known in
    carbohydrates as a glycosidic bond
   3 dissaccharides that all involve glucose:
     Maltose = glucose + glucose
     Lactose = glucose + galactose
     Sucrose = glucose + fructose
Dissaccharide: Maltose

   Glucose + Glucose = Maltose + H2O
   Produced in malted products (e.g. beer)
   Linkage: α-1,4
Dissaccharide: Lactose

   Glucose + Galactose = Lactose + H2O
   the major form of sugar in milk
   People with lactose intolerance lack the
    enzyme needed to break down lactose
   Linkage: β-1,4
Dissaccharide: Sucrose

   Glucose + Fructose = Sucrose + H2O
   table sugar
   the major transport form of sugars in plants
   Linkage: α-1,2
Reducing Sugars

   In a chemical reaction, when the anomeric
    carbon has an OH group, it is considered a
    reducing sugar.
   All monosaccharides are reducing sugars
Identify the anomeric carbon in each molecule:
Disaccharides: Reducing?
   Name the monosaccharides
   Name the disaccharide
   Name the linkage
   Is the disaccharide a reducing sugar?
Disaccharides: Reducing?
   Name the monosaccharides
   Name the disaccharide
   Name the linkage
   Is the disaccharide a reducing sugar?
Disaccharides: Reducing?
   Name the monosaccharides
   Name the disaccharide
   Name the linkage
   Is the disaccharide a reducing sugar?
Polysaccharide

   Polysaccharides: polymers of monosaccharide
    (glucose) joined by glycosidic linkages.
   Two types of function:
     Storage: Energy storage macromolecule that is
      hydrolyzed as needed.
     Structural support: Building materials for the cell.
Starch

   glucose monomers joined by α-1,4 linkages
Starch

   Is made up of two forms that have a helical
    structure
   Amylose: unbranched form
   Amylopectin: branched form
Starch

            Main chain
             linkage (both):
               -1,4-glycosidic
             bond
            Branch linkage
             (amylopectin):
               -1,6-glycosidic
             bond
Starch

   Found in plants
   stored within chloroplasts
   a way to store surplus glucose
   Animals can eat plants containing starch and
    derive energy from it
Glycogen
   Storage in liver and muscle cells of animals
   Glucose polymer with extensive branching
   Helical structure




                                                   Fig. 5.6b
Glycogen

Function of
branching: allows
enzyme easy
access to
breakdown the
more loosely
packed molecule
into glucose
Glycogen

   Main chain linkage:
     -1,4-glycosidic bond
   Branch linkage:
     -1,6-glycosidic bond
Cellulose
   glucose monomers joined by β-1,4 linkages
   has no branching
   this linkage makes every other glucose
    molecule face upside down resulting in a
    straight chain (non-helical) 3D structure
Cellulose

   Make up the plant cell wall
   Strength of cellulose from crosslinks:
     hydrogen bonds between parallel strands of
      cellulose
     H atoms of OH groups on one strand form H-
      bonds with OH groups on other strands.
Cellulose




       Fig. 5.8
Cellulose




      Cellulose is found in cell walls of plants cells
      Humans: Enzymes that digest starch cannot hydrolyze
       the β linkages in cellulose
      Cows: have symbiotic relationships with microbes that
       have enzymes that can digest cellulose.
http://blogs.discovermagazine.com/80beats/2011/01/27/to-find-the-future-of-biofuels-punch-a-hole-in-a-cow/          http://www.nature.com/nature/journal/v470/n7332/full/470008c.html
http://blogs.discovermagazine.com/80beats/files/2011/01/CowBiofuel.jpg                                       http://www.nature.com/nature/journal/v470/n7332/images/470008c-i1.0.jpg
Chitin

Found in:
 cell walls of many fungi
 exoskeletons of
  arthropods (insects,
  spiders, and
  crustaceans such as
  crabs, lobsters and
  shrimp).

                             http://academic.brooklyn.cuny.edu/biology/bio4fv/page/chitin.html
Chitin

   Similar in
    structure to
    cellulose,
    except that
    it contains
    nitrogen
   Linkage:
    β-1,4

                   http://www.ceoe.udel.edu/horseshoecrab/research/images/Chitin_molecule2_flat.jpg
                                       http://www.nzetc.org/etexts/Bio14Tuat01/Bio14Tuat01_038a.jpg
Polysaccharide Summary

Function   Structure   Animals   Plants


  Fuel




Support
Polysaccharide Summary

Function      Structure          Animals      Plants

           helical ( -1,4 ) &
  Fuel     mostly branched       Glycogen    Starch
                ( -1,6 )

              straight,            Chitin
Support      unbranched           (fungi &  Cellulose
                β-1,4           arthropods)

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Macro mols - carbohydrates lesson

  • 2. Macromolecules  Macro: large  Macromolecules are built by combining a number of smaller subunits  Monomer: a single subunit  Polymer: larger units made by covalent bonds between monomers
  • 3. Building Macromolecules  A large variety of polymers can be built from a few monomers  Cells can create many different macromolecules from a small number of starting materials by arranging them in different combinations
  • 4. Analogy: The Asian Kitchen “Fourteen simple basics, augmented by general pantry staples such as sugar, salt, cornstarch, chicken broth, rice, oil, and black pepper, one can take most fresh ingredients and create a plethora of dishes from every province of China.” http://www.tigersandstrawberries.com/2007/02/21/staple-ingredients-of-the-chinese-pantry/ http://nookandpantry.blogspot.ca/2008/02/chinese-pantry-part-i-what-you-need-to.html
  • 5. Analogy: Alphabets  26 letters of the alphabet makes over 125,000 words in the English language http://oxforddictionaries.com/words/how-many-words-are-there-in-the-english-language  4 nitrogen bases, A T C G, in DNA makes up our entire genome
  • 6. Metabolism  The process by which macromolecules are built from monomers or disassembled is metabolism  Metabolism: the sum of all chemical reactions that occur in a living organism  Classified into 2 types:  Anabolism: reactions that build up molecules  Catabolism: reactions that breakdown molecules
  • 7. Anabolism Reactions  Condensation (dehydration synthesis): monomers are covalently linked to make a polymer by removing water Text page 63, Fig. 5.2a.
  • 8. Catabolism Reactions  Hydrolysis: covalent bonds connecting monomers in a polymer are disassembled by the addition of water
  • 9. Macromolecules Four major classes are: 1. Carbohydrates 2. Lipids 3. Proteins 4. Nucleic acids
  • 10. What you need to know… 1. Structure of the basic unit (e.g. monomers) that builds up the macromolecule 2. How macromolecules react to form larger molecules 3. How the larger molecules are broken down into basic units 4. Functions of the molecules in living organisms
  • 11. Carbohydrate  Carbo = carbon (C)  Hydrate = water (H2O)  Carbohydrates are multiples of the basic formula: CH2O  Example: A carbohydrate with 6 carbons  CH2O x 6 = C6H12O6 = hexose (e.g. glucose)
  • 12. Monomer: Monosaccharides  Mono = 1  Saccharide = sugar  Ranges from 3 to 7 carbons in length  Most names for sugars end in –ose  Hexose: glucose, fructose
  • 13. Function of Monosaccharide  FUEL: short-term energy storage  building materials  cellular communication
  • 14. Monosaccharide Classification A. Number of carbons in the backbone  Triose: 3C  Pentose: 5C  Hexose: 6C B. Location of the carbonyl group (-C=O)  Aldose: carbonyl group at the end (aldehyde)  Ketose: carbonyl group in the middle (ketone)
  • 16. Numbering System  Where is carbon 1 in each molecule? Explain how the choice was made.
  • 17. Linear and Ring forms  In aqueous solutions, hexose sugars form rings  C=O group will react with the OH group on C5 to form a stable 5 or 6 sided ring structure  Count the number of C, H, O in the ring structure. Are any atoms lost?
  • 18. Practice: Form Ring Structures  Build the linear molecule. Rearrange the bonds to get the final ring form. Hint: it involves the functional group.  In your notes, draw an arrow to show the 2 atoms in the linear structure that connects to form the ring. Number the carbons in both the linear and ring structures.
  • 20. Ring forms of hexose sugars  Question: How do you distinguish galactose, mannose and fructose from glucose? Refer to specific carbon numbers. Glucose Galactose Mannose Fructose
  • 21. Ring forms of hexose sugars Glucose Galactose Mannose Fructose
  • 22. Ring forms of hexose sugars Glucose Galactose Mannose Fructose Carbon 4 – Carbon 2 – OH is up OH is up
  • 23. Ring forms of hexose sugars Glucose Galactose Mannose Fructose Carbon 4 – Carbon 2 – 5 sided ring OH is up OH is up
  • 24. Anomeric Carbon  The C of the C=O group is called an anomeric carbon -glucose  Depending if the OH group attaches from the top or bottom, different ring structure is formed. -glucose
  • 25. Anomeric Carbon  The different orientation of the resulting OH group have different names  Alpha (α) = OH group below ring  Beta (β) = OH group above ring
  • 26. Saccharide Condensation Reaction  Which functional group(s) participates in this reaction?  What is the name of the new functional group formed (red box)?
  • 27. Linkage Naming To name the linkage:  Identify whether the anomeric carbon in the link is α or β  Number the carbons and determine the 2 that are involved in the linkage  Example: α-1,4 linkage
  • 28. Linkage: Anomeric Carbon  α and β orientation of the anomeric carbon result in the formation of different types of bonds in polymers non-digestible digestible
  • 29. Dissaccharide  Di = two  Condensation reaction of 2 monosaccharides forming an ether bond known in carbohydrates as a glycosidic bond  3 dissaccharides that all involve glucose:  Maltose = glucose + glucose  Lactose = glucose + galactose  Sucrose = glucose + fructose
  • 30. Dissaccharide: Maltose  Glucose + Glucose = Maltose + H2O  Produced in malted products (e.g. beer)  Linkage: α-1,4
  • 31. Dissaccharide: Lactose  Glucose + Galactose = Lactose + H2O  the major form of sugar in milk  People with lactose intolerance lack the enzyme needed to break down lactose  Linkage: β-1,4
  • 32. Dissaccharide: Sucrose  Glucose + Fructose = Sucrose + H2O  table sugar  the major transport form of sugars in plants  Linkage: α-1,2
  • 33. Reducing Sugars  In a chemical reaction, when the anomeric carbon has an OH group, it is considered a reducing sugar.  All monosaccharides are reducing sugars Identify the anomeric carbon in each molecule:
  • 34. Disaccharides: Reducing?  Name the monosaccharides  Name the disaccharide  Name the linkage  Is the disaccharide a reducing sugar?
  • 35. Disaccharides: Reducing?  Name the monosaccharides  Name the disaccharide  Name the linkage  Is the disaccharide a reducing sugar?
  • 36. Disaccharides: Reducing?  Name the monosaccharides  Name the disaccharide  Name the linkage  Is the disaccharide a reducing sugar?
  • 37. Polysaccharide  Polysaccharides: polymers of monosaccharide (glucose) joined by glycosidic linkages.  Two types of function:  Storage: Energy storage macromolecule that is hydrolyzed as needed.  Structural support: Building materials for the cell.
  • 38. Starch  glucose monomers joined by α-1,4 linkages
  • 39. Starch  Is made up of two forms that have a helical structure  Amylose: unbranched form  Amylopectin: branched form
  • 40. Starch  Main chain linkage (both): -1,4-glycosidic bond  Branch linkage (amylopectin): -1,6-glycosidic bond
  • 41. Starch  Found in plants  stored within chloroplasts  a way to store surplus glucose  Animals can eat plants containing starch and derive energy from it
  • 42. Glycogen  Storage in liver and muscle cells of animals  Glucose polymer with extensive branching  Helical structure Fig. 5.6b
  • 43. Glycogen Function of branching: allows enzyme easy access to breakdown the more loosely packed molecule into glucose
  • 44. Glycogen  Main chain linkage: -1,4-glycosidic bond  Branch linkage: -1,6-glycosidic bond
  • 45. Cellulose  glucose monomers joined by β-1,4 linkages  has no branching  this linkage makes every other glucose molecule face upside down resulting in a straight chain (non-helical) 3D structure
  • 46. Cellulose  Make up the plant cell wall  Strength of cellulose from crosslinks:  hydrogen bonds between parallel strands of cellulose  H atoms of OH groups on one strand form H- bonds with OH groups on other strands.
  • 47. Cellulose Fig. 5.8
  • 48. Cellulose  Cellulose is found in cell walls of plants cells  Humans: Enzymes that digest starch cannot hydrolyze the β linkages in cellulose  Cows: have symbiotic relationships with microbes that have enzymes that can digest cellulose. http://blogs.discovermagazine.com/80beats/2011/01/27/to-find-the-future-of-biofuels-punch-a-hole-in-a-cow/ http://www.nature.com/nature/journal/v470/n7332/full/470008c.html http://blogs.discovermagazine.com/80beats/files/2011/01/CowBiofuel.jpg http://www.nature.com/nature/journal/v470/n7332/images/470008c-i1.0.jpg
  • 49. Chitin Found in:  cell walls of many fungi  exoskeletons of arthropods (insects, spiders, and crustaceans such as crabs, lobsters and shrimp). http://academic.brooklyn.cuny.edu/biology/bio4fv/page/chitin.html
  • 50. Chitin  Similar in structure to cellulose, except that it contains nitrogen  Linkage: β-1,4 http://www.ceoe.udel.edu/horseshoecrab/research/images/Chitin_molecule2_flat.jpg http://www.nzetc.org/etexts/Bio14Tuat01/Bio14Tuat01_038a.jpg
  • 51. Polysaccharide Summary Function Structure Animals Plants Fuel Support
  • 52. Polysaccharide Summary Function Structure Animals Plants helical ( -1,4 ) & Fuel mostly branched Glycogen Starch ( -1,6 ) straight, Chitin Support unbranched (fungi & Cellulose β-1,4 arthropods)

Notas do Editor

  1. Aldehyde to alcohol - reductionAlcohol to aldehyde - oxidation
  2. Glycosidic bond: Ether