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HOW TO WRITE AN EFFECTIVE 
RESEARCH PAPER 
• Getting ready with data 
• First draft 
• Structure of a scientific paper 
• Selecting a journal 
• Submission 
• Revision and galley proof 
Disclaimer: The suggestions and remarks in this presentation are based on 
personal research experience. Research practices and approaches vary. 
Exercise your own judgment regarding the suitability of the content. 
–P. Kamat
Getting ready with data 
Gather all important data, analyses, plots and tables 
Organize results so that they follow a logical sequence (this may 
or may not be in the order of experiments conducted) 
Consolidate data plots and create figures for the manuscript 
(Limit the number of total figures (6-8 is usually a good number). 
Include additional data, multimedia in the Supporting Information.) 
Discuss the data with your advisor and note down important 
points
Important: KNOW the focus of your paper 
It takes a wise man to know whether he 
has found a ROPE or LOST A MULE. 
- Anonymous quote 
?
First draft 
Identify two or three important findings emerging from the 
experiments. Make them the central theme of the article. 
Note good and bad writing styles in the literature. Some are simple 
and easy to follow, some are just too complex. 
Note the readership of the journal that you are considering to 
publish your work 
Prepare figures, schemes and tables in a professional manner 
(Pay attention to quantification of data accuracy, significant digits, 
error bars,) 
0.001 1x10-3 -- one sig fig 
0.00100 1.00x10-3 -- three sig figs
Structure of a scientific paper 
Title 
Abstract 
TOC Graphics 
Introduction 
Experimental Section 
(Some papers require this section to be at the end) 
Results and Discussion 
Conclusions 
Acknowledgments 
References 
Supporting Information
Title 
Compose a title that is simple, attractive and accurately reflects the 
investigation 
-Phrases to avoid: Investigation, Study, Novel, Facile etc. 
- Avoid Acronyms that are known only to specialized community 
Which of these two titles make you read the paper? 
Also try to get it right
Abstract 
First couple of sentences should focus on what the study is about. Include 
major findings in a style that a general readership can read and understand 
(i.e., avoid detailed experimental procedures and data.) Keep it short and 
effective. 
-Be creative in generating curiosity 
Large Aggregated Ions Found in Some Protic Ionic Liquids 
Danielle F. Kennedy and Calum J. Drummond 
J. Phys. Chem. B, 2009, 113 (17), pp 5690–5693 
Large aggregated parent ions, for example, C8A7+ (C = cation and A = 
anion), have been observed within some protic ionic liquids (PILs) using 
electrospray ionization mass spectrometry (ESI-MS). We have shown that 
the formation and size of aggregates is dependent on the nature of the anion 
and cation. Solvent structuring in select PILs through aggregation can 
contribute to their classification as “poor ionic liquids” and can also strongly 
influence the entropic component to the free energy of amphiphile self-assembly 
in select PILs. 
Keep it simple and informative
TOC Graphics 
A scheme or figure to convey the theme of paper 
Make use of TOC Graphics to convey the theme 
Graph 
versus 
Scheme
Structure of a scientific paper 
Introduction 
• Start the section with a general background of the topic. 
• Add 2-3 paragraphs that discuss previous work. 
• Point out issues that are being addressed in the present work. 
Experimental Section 
• Divide this section into Materials & Methods, Characterization, 
Measurements and Data analysis 
Results and Discussion 
(These two sections can be combined or separate) 
• Describe the results in detail and include a healthy, detailed 
discussion 
• The order of figures should follow the discussion themes and not 
the sequence they were conducted 
• Discuss how your data compare or contrast with previous results. 
• Include schemes, photographs to enhance the scope of discussion 
Avoid 
• Excessive presentation of data/results without any discussion 
• Citing every argument with a published work
Structure of a scientific paper 
Conclusions 
Include major findings followed by brief discussion on future 
perspectives and/or application of present work to other disciplines. 
Important: Do not rewrite the abstract. 
Statements with “Investigated” or “Studied” are not conclusions! 
Acknowledgments 
Remember to thank the funding agency and 
Colleagues/scientists/technicians who might have provided assistance 
References 
The styles vary for different journals. (Use ENDNOTE, RefWorks) 
Some journals require complete titles of the cited references 
Please check for the accuracy of all citations 
Supporting Information 
Include methods, analysis, blank experiments, additional data
Selecting a journal 
Each journal specializes in a specific area of research. Hence its 
readership varies. A proper choice of journal can make a larger 
impact of your research. 
Get to know the focus and readership of the journal that you are 
considering. - general vs. specialized area journal 
Select 2 or 3 journals in the chosen area with relatively high impact 
factors. Discuss with your advisor and decide on the journal 
Find out the journal’s submission criteria and format 
Tip: Does your references cite journals in the appropriate area?
08 
2008 IMPACT FACTORS OF POPULAR JOURNALS 
0 2 4 6 8 10 
Impact Factor 
Angew.Chem. 10.879 
NanoLett 10.371 
Adv.Mater. 8.191 
JACS 8.091 
PRL 7.180 
Small 6.525 
AdvFunctMat 6.808 
ACSNano 5.472 
Chem.EuroJ 5.454 
ChemCom 5.340 
ChemMater 5.046 
JPCB 4.189 
Langmuir 4.097 
JMatChm 4.646 
PCCP 4.064 
APL 3.726 
ChmPhyChm 3.636 
JPCC 3.378 
PRB 3.322 
JChmPhys 3.149 
JPCA 2.871 
JEchmSoc 2.437 
CPL 2.169 
No. of 2006&2007 citations in 2008 
IF(2008) = No of papers published in 2006&2007
2008 
2008 EIGENFACTORS OF TOP 11 PHYS CHEM JOURNALS 
(PLUS JACS AND ANGEW CHEM) 
0.0 0.2 0.4 0.6 0.8 1.0 
Impact Factor 
JACS 0.951 
AngewChem 0.513 
JPCB 0.438 
Langmuir 0.253 
AdvMater 0.213 
NatMater 0.185 
JPCA 0.181 
ChemMater 0.161 
ChemPhysLet 0.140 
JMaterChem 0.099 
PhysChemPhy 0.088 
JCollInterf 0.081 
AdvFunctMat 0.080 
Eigenfactor Score: 
•Impact factor based on citations of past 5 years. 
•Eliminates self-citations. 
•Weighs each reference according to a stochastic measure
Submission 
Read the finalized paper carefully. Check for accuracy of figures and 
captions. Are the figures correctly referred to in the text? 
Get feedback from advisor and colleagues. 
Make sure the paper is read by at least one or two colleagues who is 
not familiar with the specific work. 
Provide a cover letter to the editor along with a brief paragraph 
highlighting the importance of this work and names of possible 
reviewers. 
Have all coauthors approve the finalized version of the paper 
Submit the paper online along with copyright form.
Revision and galley proof 
• The manuscript is usually reviewed by 2-3 reviewers 
• Reviewers point out deficiencies and/or suggestions to improve the 
scientific content 
• Read their comments carefully. (If reviewer misunderstands a point, 
the point probably needs revision or additional support.) 
-Do not blame the reviewer for his/her misunderstanding! 
• Be polite and respectful when disagreeing a reviewer’s comment 
• Include a point-by-point explanation of changes made in the text in 
response to reviewers’ comments 
• Once again, carefully read the paper for its accuracy in presenting 
the data 
• Submit the revised version 
• Once accepted for publication you should receive the galley proof 
within a month. This is one last chance to make any final 
corrections.
What to do if a paper gets rejected…… 
Do not get discouraged. Read editorial comments and discuss 
with advisor/students/collaborators. Find out how you can make 
this study stronger and acceptable for publication. 
Do not just turn around and submit the paper to another journal. 
Read carefully the comments and find ways to improve the 
scientific quality of the papers 
Carry out additional experiments and improve the quality of 
scientific discussions. (Journals often look for papers with 
quantitative and mechanistic information that represent new 
physical insights ) 
Rejected papers can be resubmitted if and only the concerns of 
the reviewers are adequately addressed and new results are 
included. 
If you have questions, please feel free to contact the 
editorial office.
What to Avoid? 
• Data without scientific discussion, applications of data, or 
reviews of the literature are not sufficient. 
• Routine synthesis and characterization of nanomaterials or 
studies that report incremental advance are not considered 
suitable for publication. 
• Use of the phrase “Novel” or “First-time” in the title or 
abstract. Such descriptions do not impress the reader or 
the reviewer. 
(Other over used phrases “One-pot synthesis”, “Facile” ) 
• Names of flowers, fruits and vegetables to describe the 
nanoparticle/nanostructure shapes/morphology
To do even better …. 
The authors should make every effort to make a 
good presentation with proper usage of English 
grammar. 
Ask a colleague to comment on your paper before 
sending it for publication. 
“English is not my Native Language” is not a valid 
justification for reviewer who cannot comprehend. 
Reviewers do not wish to review papers that are not 
readable. Badly written papers are often 
recommended as “REJECT” by the Reviewers 
ACS Publication office helps to edit the language for 
accepted manuscripts, but this only happens if the 
English was good enough to be reviewed.
Ten characteristics of an incredibly dull paper 
Sand-Jenson in Oikos 2007, 116 723 (C&E News Sept 10, 2007) 
1. Avoid Focus 
2. Avoid originality and personality 
3. Make the article really really long 
4. Do not indicate any potential implications 
5. Leave out illustrations (…too much effort to draw a 
sensible drawing) 
6. Omit necessary steps of reasoning 
7. Use abbreviations and technical terms that only 
specialists in the field can understand 
8. Make it sound too serious with no significant 
discussion 
9. Focus only on statistics 
10.Support every statement with a reference
For more research tips 
See http://www.nd.edu/~pkamat
Good Luck! 
Do not ever give up!

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Researchpaper

  • 1. HOW TO WRITE AN EFFECTIVE RESEARCH PAPER • Getting ready with data • First draft • Structure of a scientific paper • Selecting a journal • Submission • Revision and galley proof Disclaimer: The suggestions and remarks in this presentation are based on personal research experience. Research practices and approaches vary. Exercise your own judgment regarding the suitability of the content. –P. Kamat
  • 2. Getting ready with data Gather all important data, analyses, plots and tables Organize results so that they follow a logical sequence (this may or may not be in the order of experiments conducted) Consolidate data plots and create figures for the manuscript (Limit the number of total figures (6-8 is usually a good number). Include additional data, multimedia in the Supporting Information.) Discuss the data with your advisor and note down important points
  • 3. Important: KNOW the focus of your paper It takes a wise man to know whether he has found a ROPE or LOST A MULE. - Anonymous quote ?
  • 4. First draft Identify two or three important findings emerging from the experiments. Make them the central theme of the article. Note good and bad writing styles in the literature. Some are simple and easy to follow, some are just too complex. Note the readership of the journal that you are considering to publish your work Prepare figures, schemes and tables in a professional manner (Pay attention to quantification of data accuracy, significant digits, error bars,) 0.001 1x10-3 -- one sig fig 0.00100 1.00x10-3 -- three sig figs
  • 5. Structure of a scientific paper Title Abstract TOC Graphics Introduction Experimental Section (Some papers require this section to be at the end) Results and Discussion Conclusions Acknowledgments References Supporting Information
  • 6. Title Compose a title that is simple, attractive and accurately reflects the investigation -Phrases to avoid: Investigation, Study, Novel, Facile etc. - Avoid Acronyms that are known only to specialized community Which of these two titles make you read the paper? Also try to get it right
  • 7. Abstract First couple of sentences should focus on what the study is about. Include major findings in a style that a general readership can read and understand (i.e., avoid detailed experimental procedures and data.) Keep it short and effective. -Be creative in generating curiosity Large Aggregated Ions Found in Some Protic Ionic Liquids Danielle F. Kennedy and Calum J. Drummond J. Phys. Chem. B, 2009, 113 (17), pp 5690–5693 Large aggregated parent ions, for example, C8A7+ (C = cation and A = anion), have been observed within some protic ionic liquids (PILs) using electrospray ionization mass spectrometry (ESI-MS). We have shown that the formation and size of aggregates is dependent on the nature of the anion and cation. Solvent structuring in select PILs through aggregation can contribute to their classification as “poor ionic liquids” and can also strongly influence the entropic component to the free energy of amphiphile self-assembly in select PILs. Keep it simple and informative
  • 8. TOC Graphics A scheme or figure to convey the theme of paper Make use of TOC Graphics to convey the theme Graph versus Scheme
  • 9. Structure of a scientific paper Introduction • Start the section with a general background of the topic. • Add 2-3 paragraphs that discuss previous work. • Point out issues that are being addressed in the present work. Experimental Section • Divide this section into Materials & Methods, Characterization, Measurements and Data analysis Results and Discussion (These two sections can be combined or separate) • Describe the results in detail and include a healthy, detailed discussion • The order of figures should follow the discussion themes and not the sequence they were conducted • Discuss how your data compare or contrast with previous results. • Include schemes, photographs to enhance the scope of discussion Avoid • Excessive presentation of data/results without any discussion • Citing every argument with a published work
  • 10. Structure of a scientific paper Conclusions Include major findings followed by brief discussion on future perspectives and/or application of present work to other disciplines. Important: Do not rewrite the abstract. Statements with “Investigated” or “Studied” are not conclusions! Acknowledgments Remember to thank the funding agency and Colleagues/scientists/technicians who might have provided assistance References The styles vary for different journals. (Use ENDNOTE, RefWorks) Some journals require complete titles of the cited references Please check for the accuracy of all citations Supporting Information Include methods, analysis, blank experiments, additional data
  • 11. Selecting a journal Each journal specializes in a specific area of research. Hence its readership varies. A proper choice of journal can make a larger impact of your research. Get to know the focus and readership of the journal that you are considering. - general vs. specialized area journal Select 2 or 3 journals in the chosen area with relatively high impact factors. Discuss with your advisor and decide on the journal Find out the journal’s submission criteria and format Tip: Does your references cite journals in the appropriate area?
  • 12. 08 2008 IMPACT FACTORS OF POPULAR JOURNALS 0 2 4 6 8 10 Impact Factor Angew.Chem. 10.879 NanoLett 10.371 Adv.Mater. 8.191 JACS 8.091 PRL 7.180 Small 6.525 AdvFunctMat 6.808 ACSNano 5.472 Chem.EuroJ 5.454 ChemCom 5.340 ChemMater 5.046 JPCB 4.189 Langmuir 4.097 JMatChm 4.646 PCCP 4.064 APL 3.726 ChmPhyChm 3.636 JPCC 3.378 PRB 3.322 JChmPhys 3.149 JPCA 2.871 JEchmSoc 2.437 CPL 2.169 No. of 2006&2007 citations in 2008 IF(2008) = No of papers published in 2006&2007
  • 13. 2008 2008 EIGENFACTORS OF TOP 11 PHYS CHEM JOURNALS (PLUS JACS AND ANGEW CHEM) 0.0 0.2 0.4 0.6 0.8 1.0 Impact Factor JACS 0.951 AngewChem 0.513 JPCB 0.438 Langmuir 0.253 AdvMater 0.213 NatMater 0.185 JPCA 0.181 ChemMater 0.161 ChemPhysLet 0.140 JMaterChem 0.099 PhysChemPhy 0.088 JCollInterf 0.081 AdvFunctMat 0.080 Eigenfactor Score: •Impact factor based on citations of past 5 years. •Eliminates self-citations. •Weighs each reference according to a stochastic measure
  • 14. Submission Read the finalized paper carefully. Check for accuracy of figures and captions. Are the figures correctly referred to in the text? Get feedback from advisor and colleagues. Make sure the paper is read by at least one or two colleagues who is not familiar with the specific work. Provide a cover letter to the editor along with a brief paragraph highlighting the importance of this work and names of possible reviewers. Have all coauthors approve the finalized version of the paper Submit the paper online along with copyright form.
  • 15. Revision and galley proof • The manuscript is usually reviewed by 2-3 reviewers • Reviewers point out deficiencies and/or suggestions to improve the scientific content • Read their comments carefully. (If reviewer misunderstands a point, the point probably needs revision or additional support.) -Do not blame the reviewer for his/her misunderstanding! • Be polite and respectful when disagreeing a reviewer’s comment • Include a point-by-point explanation of changes made in the text in response to reviewers’ comments • Once again, carefully read the paper for its accuracy in presenting the data • Submit the revised version • Once accepted for publication you should receive the galley proof within a month. This is one last chance to make any final corrections.
  • 16. What to do if a paper gets rejected…… Do not get discouraged. Read editorial comments and discuss with advisor/students/collaborators. Find out how you can make this study stronger and acceptable for publication. Do not just turn around and submit the paper to another journal. Read carefully the comments and find ways to improve the scientific quality of the papers Carry out additional experiments and improve the quality of scientific discussions. (Journals often look for papers with quantitative and mechanistic information that represent new physical insights ) Rejected papers can be resubmitted if and only the concerns of the reviewers are adequately addressed and new results are included. If you have questions, please feel free to contact the editorial office.
  • 17. What to Avoid? • Data without scientific discussion, applications of data, or reviews of the literature are not sufficient. • Routine synthesis and characterization of nanomaterials or studies that report incremental advance are not considered suitable for publication. • Use of the phrase “Novel” or “First-time” in the title or abstract. Such descriptions do not impress the reader or the reviewer. (Other over used phrases “One-pot synthesis”, “Facile” ) • Names of flowers, fruits and vegetables to describe the nanoparticle/nanostructure shapes/morphology
  • 18. To do even better …. The authors should make every effort to make a good presentation with proper usage of English grammar. Ask a colleague to comment on your paper before sending it for publication. “English is not my Native Language” is not a valid justification for reviewer who cannot comprehend. Reviewers do not wish to review papers that are not readable. Badly written papers are often recommended as “REJECT” by the Reviewers ACS Publication office helps to edit the language for accepted manuscripts, but this only happens if the English was good enough to be reviewed.
  • 19. Ten characteristics of an incredibly dull paper Sand-Jenson in Oikos 2007, 116 723 (C&E News Sept 10, 2007) 1. Avoid Focus 2. Avoid originality and personality 3. Make the article really really long 4. Do not indicate any potential implications 5. Leave out illustrations (…too much effort to draw a sensible drawing) 6. Omit necessary steps of reasoning 7. Use abbreviations and technical terms that only specialists in the field can understand 8. Make it sound too serious with no significant discussion 9. Focus only on statistics 10.Support every statement with a reference
  • 20. For more research tips See http://www.nd.edu/~pkamat
  • 21. Good Luck! Do not ever give up!