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An On-line Collaborative Platform for
Earth Observation Scientists
 An on-line platform
 For:
 Earth Observation Scientists
 Facilitating:
 Collaboration between scientists
 Data access, management and sharing
 Application access, management and sharing
 Leveraging:
 Web 2.0 and social networking technologies
 Cloud computing technologies
 Funded by:
 CANARIE - Network Enabled Platform (NEP-1) program
 Cybera
(http://geochronos.org/)
NEP Showcase
Oct. 21, 2010 2
 Solutions
 Portal rich with social networking features
 Tags, bookmarks, profiles, blogs, wikis, friends/contacts, groups
 Media/document sharing, publications, presentations
 Discussions, message boards, calendars
 Status, activity feeds
 Technology
 Portal built on top of a social networking platform
 Initial prototype built in Facebook (http://www.facebook.com)
 Secondary prototype built on white label social networking platform Ning
(http://www.ning.com)
 Current portal built on open source white label social networking platform Elgg
(http://www.elgg.org)
 Next Steps
 Plan to keep using Elgg platform and upgrade as new versions released
 Develop new Elgg plugins as needed
Collaboration
NEP Showcase
Oct. 21, 2010 3
Dashboard
NEP Showcase
Oct. 21, 2010 4
Groups
NEP Showcase
Oct. 21, 2010 5
 Solutions
 Spectral Libraries
 Store, share and browse spectral data
 View spectral plots, metadata, ancillary data and maps
 Manage and generate metadata for spectra
 Create and share metadata schemas
 Spectral Library solution also being used to manage MODIS
satellite data
 Technology
 iRODS (http://www.irods.org/) for data storage/management
 Next Steps
 Further generalization of spectral library solution
 Acquire, store, manage, browse and share other types of data
 Flux tower and phenology tower data
 Meteorological data
 Other data
Data
NEP Showcase
Oct. 21, 2010 6
Spectral Library - Browse
NEP Showcase
Oct. 21, 2010 7
Spectral Library - Metadata
NEP Showcase
Oct. 21, 2010 8
 Solutions
 Interactive Application Service (IAS)
 On-line, on-demand access to scientific applications
 Share application sessions and data with other users
 Batch Processing Service (BPS)
 Background batch processing of longer running tasks and simulations
 Automation of data workflows – mosaic, reproject and subset MODIS data
 Technology
 IAS and BPS are hosted on top of a cloud computing platform
 Use ASPEN (http://grid.ucalgary.ca/projects/DataCentre/) which can
dynamically provision virtual machines to host applications based on user
demand
 Next Steps
 Better integration between different data and application services
 Application of batch processing/workflow service to other problems
Applications/Processing
NEP Showcase
Oct. 21, 2010 9
Application Catalogue
NEP Showcase
Oct. 21, 2010 10
Interactive Application Service
NEP Showcase
Oct. 21, 2010 11
MODIS Workflow Service
NEP Showcase
Oct. 21, 2010 12
 Apr 21, 2009 - CANARIE NEP-1 Synergy Workshop
(Winnipeg)
 Jun 22, 2009 - SpecNet Workshop (Lethbridge)
 Jun 24-26, 2009 – Meeting of the Collaborative Research
Network II (CRN2) and Small Grant Program for the Human
Dimensions (SGP-HD) Principal Investigators (Montevideo,
Uruguay)
 Jul 6-18, 2009 - IAI International Wireless Sensor Networking
Summer School (Edmonton)
 Aug 15, 2009 – Elgg Camp (Boston)
 Oct 14, 2009 – Summit 09 (Banff)
 Nov 17,18, 2009 – SC 2009 (Portland)
 Nov 20, 2009 – GCE 2009 (Portland)
Presentations/Demonstrations
NEP Showcase
Oct. 21, 2010 13
 Dec 9, 2009 – e-Science 2009 (Oxford, UK)
 Dec 14, 2009 – AGU Fall Meeting (San Francisco)
 Mar 4, 2010 – Earth Observation Science Day
(Edmonton)
 Mar 15, 2010 – OGF 28 (Munich)
 Apr 29, 2010 – European Cooperation in Science and
Technology (COST) Meeting (Italy)
 May 5, 2010 – BCNET/CANARIE Conference 2010
(Vancouver)
 Aug 14, 2010 – IAI Collaborative Research Network
Meeting (Buenos Aires, Argentina)
 Sep 22, 2010 – Cybera Summit 2010 (Banff)
Presentations/Demonstrations - II
NEP Showcase
Oct. 21, 2010 14
 R. Curry, C. Kiddle and R. Simmonds. Social Networking and
Scientific Gateways. In Proceedings of the Grid Computing
Environments Workshop, Portland, OR, November 20, 2009.
 N. Markatchev, R. Curry, C. Kiddle, A. Mirtchovski, R. Simmonds
and T. Tan. A Cloud-based Interactive Application Service. In
Proceedings of the 5th IEEE International Conference on e-
Science, Oxford, UK, December 9-11, 2009.
 J. A. Gamon, C. Kiddle, R. Curry, N. Markatchev, G. Pastorello Jr.,
B. Rivard, G. A. Sanchez-Azofeifa, R. Simmonds and T. Tan.
GeoChronos: An On-line Collaborative Platform for Earth
Observation Scientists. In Proceedings of the AGU Fall Meeting,
San Francisco, CA, December 14-18, 2009. (Abstract)
Publications
NEP Showcase
Oct. 21, 2010 15
 J. Gamon, C. Coburn, L.B. Flanagan, K.F. Huemmrich, C. Kiddle,
G.A. Sanchez-Azofeifa, D.R. Thayer, L. Vescovo, D. Gianelle, D.A.
Sims, A.F. Rahman and G.Z. Pastorello. SpecNet Revisited:
Bridging Flux and Remote Sensing Communities. To appear in
the Canadian Journal of Remote Sensing, 2010.
 R. Curry, C. Kiddle, R. Simmonds and G. Z. Pastorello Jr. An On-
line Collaborative Data Management System. To appear in
Proceedings of the Gateway Computing Environments Workshop,
New Orleans, LA, November 14, 2010.
Publications - II
NEP Showcase
Oct. 21, 2010 16
Project Team
NEP Showcase
Oct. 21, 2010 17
Dr. Arturo Sanchez-Azofeifa
University of Alberta
Dr. John Gamon
University of Alberta
Dr. Benoit Rivard
University of Alberta
Dr. Rob Simmonds
University of Calgary
Prinicipal Investigators
Project Coordination Platform Development Domain Scientists
Virtual Organization
NEP Showcase
Oct. 21, 2010 18
Contact Information
NEP Showcase
Oct. 21, 2010 19
http://geochronos.org/
info@geochronos.org
http://grid.ucalgary.ca/ http://ceos.ualberta.ca/ http://www.cybera.ca/

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GeoChronos - CANARIE NEP Showcase 2010 Presentation

  • 1. An On-line Collaborative Platform for Earth Observation Scientists
  • 2.  An on-line platform  For:  Earth Observation Scientists  Facilitating:  Collaboration between scientists  Data access, management and sharing  Application access, management and sharing  Leveraging:  Web 2.0 and social networking technologies  Cloud computing technologies  Funded by:  CANARIE - Network Enabled Platform (NEP-1) program  Cybera (http://geochronos.org/) NEP Showcase Oct. 21, 2010 2
  • 3.  Solutions  Portal rich with social networking features  Tags, bookmarks, profiles, blogs, wikis, friends/contacts, groups  Media/document sharing, publications, presentations  Discussions, message boards, calendars  Status, activity feeds  Technology  Portal built on top of a social networking platform  Initial prototype built in Facebook (http://www.facebook.com)  Secondary prototype built on white label social networking platform Ning (http://www.ning.com)  Current portal built on open source white label social networking platform Elgg (http://www.elgg.org)  Next Steps  Plan to keep using Elgg platform and upgrade as new versions released  Develop new Elgg plugins as needed Collaboration NEP Showcase Oct. 21, 2010 3
  • 6.  Solutions  Spectral Libraries  Store, share and browse spectral data  View spectral plots, metadata, ancillary data and maps  Manage and generate metadata for spectra  Create and share metadata schemas  Spectral Library solution also being used to manage MODIS satellite data  Technology  iRODS (http://www.irods.org/) for data storage/management  Next Steps  Further generalization of spectral library solution  Acquire, store, manage, browse and share other types of data  Flux tower and phenology tower data  Meteorological data  Other data Data NEP Showcase Oct. 21, 2010 6
  • 7. Spectral Library - Browse NEP Showcase Oct. 21, 2010 7
  • 8. Spectral Library - Metadata NEP Showcase Oct. 21, 2010 8
  • 9.  Solutions  Interactive Application Service (IAS)  On-line, on-demand access to scientific applications  Share application sessions and data with other users  Batch Processing Service (BPS)  Background batch processing of longer running tasks and simulations  Automation of data workflows – mosaic, reproject and subset MODIS data  Technology  IAS and BPS are hosted on top of a cloud computing platform  Use ASPEN (http://grid.ucalgary.ca/projects/DataCentre/) which can dynamically provision virtual machines to host applications based on user demand  Next Steps  Better integration between different data and application services  Application of batch processing/workflow service to other problems Applications/Processing NEP Showcase Oct. 21, 2010 9
  • 11. Interactive Application Service NEP Showcase Oct. 21, 2010 11
  • 12. MODIS Workflow Service NEP Showcase Oct. 21, 2010 12
  • 13.  Apr 21, 2009 - CANARIE NEP-1 Synergy Workshop (Winnipeg)  Jun 22, 2009 - SpecNet Workshop (Lethbridge)  Jun 24-26, 2009 – Meeting of the Collaborative Research Network II (CRN2) and Small Grant Program for the Human Dimensions (SGP-HD) Principal Investigators (Montevideo, Uruguay)  Jul 6-18, 2009 - IAI International Wireless Sensor Networking Summer School (Edmonton)  Aug 15, 2009 – Elgg Camp (Boston)  Oct 14, 2009 – Summit 09 (Banff)  Nov 17,18, 2009 – SC 2009 (Portland)  Nov 20, 2009 – GCE 2009 (Portland) Presentations/Demonstrations NEP Showcase Oct. 21, 2010 13
  • 14.  Dec 9, 2009 – e-Science 2009 (Oxford, UK)  Dec 14, 2009 – AGU Fall Meeting (San Francisco)  Mar 4, 2010 – Earth Observation Science Day (Edmonton)  Mar 15, 2010 – OGF 28 (Munich)  Apr 29, 2010 – European Cooperation in Science and Technology (COST) Meeting (Italy)  May 5, 2010 – BCNET/CANARIE Conference 2010 (Vancouver)  Aug 14, 2010 – IAI Collaborative Research Network Meeting (Buenos Aires, Argentina)  Sep 22, 2010 – Cybera Summit 2010 (Banff) Presentations/Demonstrations - II NEP Showcase Oct. 21, 2010 14
  • 15.  R. Curry, C. Kiddle and R. Simmonds. Social Networking and Scientific Gateways. In Proceedings of the Grid Computing Environments Workshop, Portland, OR, November 20, 2009.  N. Markatchev, R. Curry, C. Kiddle, A. Mirtchovski, R. Simmonds and T. Tan. A Cloud-based Interactive Application Service. In Proceedings of the 5th IEEE International Conference on e- Science, Oxford, UK, December 9-11, 2009.  J. A. Gamon, C. Kiddle, R. Curry, N. Markatchev, G. Pastorello Jr., B. Rivard, G. A. Sanchez-Azofeifa, R. Simmonds and T. Tan. GeoChronos: An On-line Collaborative Platform for Earth Observation Scientists. In Proceedings of the AGU Fall Meeting, San Francisco, CA, December 14-18, 2009. (Abstract) Publications NEP Showcase Oct. 21, 2010 15
  • 16.  J. Gamon, C. Coburn, L.B. Flanagan, K.F. Huemmrich, C. Kiddle, G.A. Sanchez-Azofeifa, D.R. Thayer, L. Vescovo, D. Gianelle, D.A. Sims, A.F. Rahman and G.Z. Pastorello. SpecNet Revisited: Bridging Flux and Remote Sensing Communities. To appear in the Canadian Journal of Remote Sensing, 2010.  R. Curry, C. Kiddle, R. Simmonds and G. Z. Pastorello Jr. An On- line Collaborative Data Management System. To appear in Proceedings of the Gateway Computing Environments Workshop, New Orleans, LA, November 14, 2010. Publications - II NEP Showcase Oct. 21, 2010 16
  • 17. Project Team NEP Showcase Oct. 21, 2010 17 Dr. Arturo Sanchez-Azofeifa University of Alberta Dr. John Gamon University of Alberta Dr. Benoit Rivard University of Alberta Dr. Rob Simmonds University of Calgary Prinicipal Investigators Project Coordination Platform Development Domain Scientists
  • 19. Contact Information NEP Showcase Oct. 21, 2010 19 http://geochronos.org/ info@geochronos.org http://grid.ucalgary.ca/ http://ceos.ualberta.ca/ http://www.cybera.ca/