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Improving Pollen Classification
   with Less Training Effort
 N. Rich Nguyen, Matina Donaldson-Matasci,
              and Min C. Shin


      WACV 2013: Clearwater Beach, FL
Why do we classify pollen?




                                           Image from youthhealthworld.com

Help develop treatment for allergy, and also vital for crops
The world of Pollen




A population of various pollen types under a microscope
Automatic Classification
Automatic classification         Manual labeling




    Goal: High accuracy with less labeling effort
Challenges
   Manual labeling           Automatic classification




Tedious and expensive         Large training samples

       Labeling effort for skilled specialists
Transfer Learning
                                               source samples
                                               existing rule




1. Learn rules from existing (source) samples using AdaBoost
Transfer Learning
                                                 source samples
                                                 existing rule
                                                 target sample

                                                 transfer rule
                                                 unlabeled sample




2. Apply rules to new (target) samples by modifying TaskTrAdaBoost
Active Learning
                                                 source samples
                                                 existing rule
                                                 target sample

                                                 transfer rule
                                                 unlabeled sample

                                                 selected sample




3. Develop a new selection criterion to focus on target samples
Active Learning
                                                      source samples
                                                      existing rule
                                                      target sample

                                                      transfer rule
                                                      unlabeled sample

                                                      selected sample

                                                      updated rule


4. Ask expert for label, then update rules based on the new training set
Results
  1. Select more target samples   2. Select better target samples




Reducing training effort up to 5 times with 92% accuracy
THANK YOU!
Poster #22: Improving Pollen Classification with Less Training Effort
BONUS SLIDES
III. Feature Computing




Develop “spike count” to detect local minimum signal
Experiments
Dataset                    Procedure
9 pollen types from bees   6 types as source (30+ samples)
5000 X 4000 image (1mm2)   3 types as target (3 samples)
10,000+ pollen grains      5 unlabeled samples X 50 iterations
770 grains labeled         30 replications




  Representative samples from different pollen types

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Improving Pollen Classification with Less Training

  • 1. Improving Pollen Classification with Less Training Effort N. Rich Nguyen, Matina Donaldson-Matasci, and Min C. Shin WACV 2013: Clearwater Beach, FL
  • 2. Why do we classify pollen? Image from youthhealthworld.com Help develop treatment for allergy, and also vital for crops
  • 3. The world of Pollen A population of various pollen types under a microscope
  • 4. Automatic Classification Automatic classification Manual labeling Goal: High accuracy with less labeling effort
  • 5. Challenges Manual labeling Automatic classification Tedious and expensive Large training samples Labeling effort for skilled specialists
  • 6. Transfer Learning source samples existing rule 1. Learn rules from existing (source) samples using AdaBoost
  • 7. Transfer Learning source samples existing rule target sample transfer rule unlabeled sample 2. Apply rules to new (target) samples by modifying TaskTrAdaBoost
  • 8. Active Learning source samples existing rule target sample transfer rule unlabeled sample selected sample 3. Develop a new selection criterion to focus on target samples
  • 9. Active Learning source samples existing rule target sample transfer rule unlabeled sample selected sample updated rule 4. Ask expert for label, then update rules based on the new training set
  • 10. Results 1. Select more target samples 2. Select better target samples Reducing training effort up to 5 times with 92% accuracy
  • 11. THANK YOU! Poster #22: Improving Pollen Classification with Less Training Effort
  • 13. III. Feature Computing Develop “spike count” to detect local minimum signal
  • 14. Experiments Dataset Procedure 9 pollen types from bees 6 types as source (30+ samples) 5000 X 4000 image (1mm2) 3 types as target (3 samples) 10,000+ pollen grains 5 unlabeled samples X 50 iterations 770 grains labeled 30 replications Representative samples from different pollen types