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Recent Highlights from the
                Nicolaou Laboratory


                                            Me                    H
                                                  Me                  Me
                                                                            Me
                               O   HN        OH               H       H H O
                                        O              Me
                                            OH
                                                                           O       O
                                                                    H Ph       O
                                                                  Me
                               O   OH

                                                            Biyouyanagin A
Truncated Haplophytine       Uncialamycin




                         Christina S. Stauffer
                         Ch i ti S St ff
                          February 27, 2008
Haplophytine
                                                               Me
                                                               N
                                                     O          O
                                                         N                        N
                                                 HO
                                                                                  O
                                                             MeO         N               O
                                                                            H
                                                                     OMe Me
                                                                   Haplophytine
                                                                     p p y
                                               CO2Me
                                               N                                                 N
                                O               O
                                      N
                                          9
                                          9'                                                     O
                                                15
                                                                            MeO           N             O
                                                                                             H
                                                         N                            OMe Me
                                          MeO
                                                     OMe CO2Me                          Aspidophytine
                                    Truncated haplophytine                        Syntheses: Corey, 1999
                                                                                             Fukuyama, 2003
                                                                                             Padwa, 2006
                                                                                             Marino, 2006
• Potent insecticidal alkaloid
                      alkaloid.
• Isolated in 1952 by Snyder and co-workers from Mexican plant Haplophyton
  cimicidum.
• Consists of a central indole moiety with two tetracyclic heterocycles attached.
                                                                        attached
• Four reported syntheses of aspidophytine, while only one report of studies towards
  the left-hand domain (Corey, 2006).
Retrosynthesis of the “Left Domain” of Haplophytin

                                                       CO2Me
                                                       N
                                      O                 O
                                             N
                                                  9'
                                                        15


                                                 MeO
                                                 M O             N
                                                             OMe CO2Me
                                           Truncated haplophytine




                              N
                     N            CO2Me
                     H                                               HO             N
                                                                              OH    CO2Me
                              CO2Me



   Nicolaou, K. C.; Majumder, U.; Roche, S. P.; Chen, D. Y.-K. Angew. Chem. Int. Ed. 2007, 46, 4715-4718.
Synthesis of indole fragment




    NH      NCCO2Me, CH2Cl2, 0 °C
N                                       N
H                                   N       CO2Me
                    51%             H
    CO2Me
                                        CO2Me
Synthesis of the indoline fragment


            CHO          1. Ac2O, Et3N, cat. DMAP                        CHO
                         2. fuming HNO3
HO                                                         HO            NO2
                         3. aq. KOH, reflux
      OMe                                                          OMe
                                 69%



1. K2CO3, BnBr, DMF
2. CH3NO2, NaOH, ,                              NO2   1. Fe, AcOH, tol, 110 °C
   MeOH/H2O, 0 °C
                                                      2. KHMDS, NCCO2Me,
3. Ac2O, NaOAc, 140 °C    BnO            NO2             THF, -78 °C
        88%                        OMe                         96%




                            1. Pd/C, H2, MeOH
                                   ,
                                                          HO          N
BnO         N               2. BBr3, CH2Cl2,
                               -78 °C to 0 °C                    OH   CO2Me
        OMe CO2Me
                                     86%
Coupling of indole and indoline fragments

                                                                         N CO2Me

                                     PIFA = PhI(CF3CO2)2                     OH
                                                                             O
                                    CH2Cl2, CH3CN, -40 °C
      N
N         CO2Me   HO        N                                            O
H                                           25%
                       OH   CO2Me
                                                                         N
      CO2Me                                                       N          CO2M
                                                                                Me
                                                                  H

                                                                         CO2Me



                       N CO2Me                               N CO2Me

                            OMe
                            OM                                   OMe
Cs2CO3, MeI
   DMF                  OMe         NaH, THF                 OMe
    60%
                       N              80%                    N
                  N         CO2M
                               Me                        N       CO2Me

                                                     O
                       CO2Me
Completion of the construction of the
   “left domain” of haplophytin
Uncialamycin



                          Me

             O   HN        OH
                      O
                          OH


             O   OH


                                                   Cladonia uncialis


• A recently discovered enediyne antibiotic isolated in 2005 by Anderson from the
  surface of the lichen, Cladonia uncialis.
• The scarcity of uncialamycin (300 μg) limited structural elucidation (C26 hydroxyl
  group was unassigned).
• Potent biological activity demonstrated against S. aureus, E. coli, and B. cepacia.
Nicolaou’s retrosynthesis of uncialamycin


                                                                   Me

                                                  O   HN              OH
                                                           O
                                                                    OH


                                                  O     OH




                                                         Me
                     CN                       N
                                                           O
                      O
                                                         OTES                      H              TMS
                     O
                                              ODMB


Nicolaou, K. C.; Zhang, H.; Chen, J. S.; Crawford, J. J.; Pasunoori, L. Angew. Chem. Int. Ed. 2007, 46, 4704-4707.
Synthesis of the substituted quinoline system
                                            O

                                                Me

                               HN           O

                                                CO2H


                                   OMe


                               O                                                            Me
1. 48% aq. HBr,        N           Me                  HCO2H, Et3N,                 N
   nBu4NBr, 110 °C                                                                           O
                                                       CH2Cl2, 0 °C
                               CO2DMB
2. DMBBr, K2CO3,                                                                            O
   nBu4NI, DMF                                             Me      Me
                       ODMB                                                         ODMB
     55%                                               Ts
                                                Ph     N
                                                         Ru
                                                        N     Me
                                                 Ph     H2 Cl

                                                       95%, 98% ee

                                    Me                                              OMe
                           N
  1. DIBAL-H, CH2Cl2                    O                                  O
                                                           DMB =
  2. TESCl, im, DMF                 OTES                              Ph                   OMe
         86%                                                                   OR
                           ODMB
Introduction of the enediyne functionality


                                                                TMS
       Me                                                 Me                                                         TMS
                                                                       1. AcOH, MeCN,                          Me
N                                          AllocN                         H2O, 91%
        O          H            TMS                       O            2. NaBH4, MeOH             AllocN        OH
                                                                                                           O
       OTES        EtMgBr, AllocCl                        OTES         3. mCPBA, CH2Cl2
                        92%                                               80% (2 steps)                        OAc
ODMB                                           ODMB                    4. AcCl, collidine, 82%
                                                                                                      ODMB




                                                    TMS
                                                                                                      H
                                             Me
                                                               1. TESCl, Im,                     Me
       1. Dess-Martin         AllocN           OH                 DMF
                                       O                                          AllocN           OTES
                                                                                           O
       2.
       2 NaBH4, MeOH                                           2.
                                                               2 K2CO3, THF
                                             OAc                  MeOH
             90%                                                                                 OH
                                                                   78%
                                  ODMB
                                                                                       ODMB
Intramolecular acetylide addition to form the enediyne ring system

                            H                                                     H
                      Me            1. Dess-Martin, 87%                     Me           CeCl3, KHMDS
                                                                                        - 78 °C to - 40 °C
         AllocN        OTES         2. DDQ,
                                    2 DDQ CH2Cl2/H2O      AllocN                 OTES
                  O                                                 O                         61%
                                       87%
                                                                                        (30% C17 epimer)
                      OH                                                    O

             ODMB                                               OH




                       Me                                                   Me
                                   1. PhI(OAc) MeOH
                                   1 PhI(OA )2, M OH
         AllocN             OTES      80%                   N                   OTES                         CN
                  O    17                                       O
                           OH                                               OH               1.
                                   2. [Pd(PPh3)2Cl2]                                                         O
                                      nBu3SnH, H2O,
                                      CH2Cl2, 74%
                                                                                                        O
              OH                                            O
                                                                                                 LiHMDS, 63%
                                                                                             2. 3HF•Et3N, THF
                                                                                                92%
                                                                                 Me

                                                           O    HN                 OH
                                                                        O
                                                                                  OH


                                                           O        OH
                                                          Uncialamycin
Synthesis of Biyouyanagin A

  (H. chinense L. var. salicifolium)




• Isolated from the leaves of a Hypericum species in 2005.
• Traditionally used as folk remedy for female disorders.
• Shows significant activity against HIV and lipopolysaccharide-induced cytokine
  production.
• Stereochemistry at C24, C17, C18 needs to be elucidated.
Structural assignment of biyouyanagin A

                H                                                         H
Me                  Me                               Me                            Me
                          Me                                                             Me
            H       H H O                                             H            H H O
     Me                                                    Me

                                     O                                                  O           O
                           O
                  H Ph         O                                   H Ph                     O
                Me                                              Me
                            Originally proposed possible structures



                    H                                                          H
 Me                     Me                              Me                          Me
                                                                                          Me
                H       H H O
                              Me                                          H
                                                                              24
                                                                                    H H O
      Me                                                     Me
                                                                                   17
                                                                                   18                   O
                             O        O                                                     O
                      H Ph                                                       H Ph           O
                    Me           O                                             Me




           Nicolaou, K. C.; Sarlah, D.; Shaw, D. M. Angew. Chem. Int. Ed. 2007, 46, 4708-4711.
Biyouyanagin A retrosynthesis




              H                                            H
Me                Me                         Me                Me
                        Me                                               O Me
          H       H H O                           Me
                                                       H
     Me                            [2 + 2]
                                                                         O       O
                       O       O                                    Ph
                H Ph                                                         O
              Me           O                               Me
Synthesis of the terpene-derived diene




                                         Cl

                                                      Tf
                                              N    N
                                                   Tf
                                         Comins reagent
Formation of the spirolactone
[2+2] Photocycloaddition




              H                                                                             H
Me                Me                                                          Me                Me
                             O Me                                                                     Me
          H
                                                   h , 2'-acetonaphthone                H       H H O
     Me                                                                            Me
                                                       CH2Cl2, rt, 5h
                             O       O                                                                       O
                       Ph                                   46%                                      O
                                 O                                                            H Ph       O
              Me                                                                            Me


                                                            H
                                         Me                     Me
                                                        H
                                              Me

                                                                     OO
                                               Me
                                                                          O
                                                                O

                                                                Me
                                                        (exo)

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Nicolaou

  • 1. Recent Highlights from the Nicolaou Laboratory Me H Me Me Me O HN OH H H H O O Me OH O O H Ph O Me O OH Biyouyanagin A Truncated Haplophytine Uncialamycin Christina S. Stauffer Ch i ti S St ff February 27, 2008
  • 2. Haplophytine Me N O O N N HO O MeO N O H OMe Me Haplophytine p p y CO2Me N N O O N 9 9' O 15 MeO N O H N OMe Me MeO OMe CO2Me Aspidophytine Truncated haplophytine Syntheses: Corey, 1999 Fukuyama, 2003 Padwa, 2006 Marino, 2006 • Potent insecticidal alkaloid alkaloid. • Isolated in 1952 by Snyder and co-workers from Mexican plant Haplophyton cimicidum. • Consists of a central indole moiety with two tetracyclic heterocycles attached. attached • Four reported syntheses of aspidophytine, while only one report of studies towards the left-hand domain (Corey, 2006).
  • 3. Retrosynthesis of the “Left Domain” of Haplophytin CO2Me N O O N 9' 15 MeO M O N OMe CO2Me Truncated haplophytine N N CO2Me H HO N OH CO2Me CO2Me Nicolaou, K. C.; Majumder, U.; Roche, S. P.; Chen, D. Y.-K. Angew. Chem. Int. Ed. 2007, 46, 4715-4718.
  • 4. Synthesis of indole fragment NH NCCO2Me, CH2Cl2, 0 °C N N H N CO2Me 51% H CO2Me CO2Me
  • 5. Synthesis of the indoline fragment CHO 1. Ac2O, Et3N, cat. DMAP CHO 2. fuming HNO3 HO HO NO2 3. aq. KOH, reflux OMe OMe 69% 1. K2CO3, BnBr, DMF 2. CH3NO2, NaOH, , NO2 1. Fe, AcOH, tol, 110 °C MeOH/H2O, 0 °C 2. KHMDS, NCCO2Me, 3. Ac2O, NaOAc, 140 °C BnO NO2 THF, -78 °C 88% OMe 96% 1. Pd/C, H2, MeOH , HO N BnO N 2. BBr3, CH2Cl2, -78 °C to 0 °C OH CO2Me OMe CO2Me 86%
  • 6. Coupling of indole and indoline fragments N CO2Me PIFA = PhI(CF3CO2)2 OH O CH2Cl2, CH3CN, -40 °C N N CO2Me HO N O H 25% OH CO2Me N CO2Me N CO2M Me H CO2Me N CO2Me N CO2Me OMe OM OMe Cs2CO3, MeI DMF OMe NaH, THF OMe 60% N 80% N N CO2M Me N CO2Me O CO2Me
  • 7. Completion of the construction of the “left domain” of haplophytin
  • 8. Uncialamycin Me O HN OH O OH O OH Cladonia uncialis • A recently discovered enediyne antibiotic isolated in 2005 by Anderson from the surface of the lichen, Cladonia uncialis. • The scarcity of uncialamycin (300 μg) limited structural elucidation (C26 hydroxyl group was unassigned). • Potent biological activity demonstrated against S. aureus, E. coli, and B. cepacia.
  • 9. Nicolaou’s retrosynthesis of uncialamycin Me O HN OH O OH O OH Me CN N O O OTES H TMS O ODMB Nicolaou, K. C.; Zhang, H.; Chen, J. S.; Crawford, J. J.; Pasunoori, L. Angew. Chem. Int. Ed. 2007, 46, 4704-4707.
  • 10. Synthesis of the substituted quinoline system O Me HN O CO2H OMe O Me 1. 48% aq. HBr, N Me HCO2H, Et3N, N nBu4NBr, 110 °C O CH2Cl2, 0 °C CO2DMB 2. DMBBr, K2CO3, O nBu4NI, DMF Me Me ODMB ODMB 55% Ts Ph N Ru N Me Ph H2 Cl 95%, 98% ee Me OMe N 1. DIBAL-H, CH2Cl2 O O DMB = 2. TESCl, im, DMF OTES Ph OMe 86% OR ODMB
  • 11. Introduction of the enediyne functionality TMS Me Me TMS 1. AcOH, MeCN, Me N AllocN H2O, 91% O H TMS O 2. NaBH4, MeOH AllocN OH O OTES EtMgBr, AllocCl OTES 3. mCPBA, CH2Cl2 92% 80% (2 steps) OAc ODMB ODMB 4. AcCl, collidine, 82% ODMB TMS H Me 1. TESCl, Im, Me 1. Dess-Martin AllocN OH DMF O AllocN OTES O 2. 2 NaBH4, MeOH 2. 2 K2CO3, THF OAc MeOH 90% OH 78% ODMB ODMB
  • 12. Intramolecular acetylide addition to form the enediyne ring system H H Me 1. Dess-Martin, 87% Me CeCl3, KHMDS - 78 °C to - 40 °C AllocN OTES 2. DDQ, 2 DDQ CH2Cl2/H2O AllocN OTES O O 61% 87% (30% C17 epimer) OH O ODMB OH Me Me 1. PhI(OAc) MeOH 1 PhI(OA )2, M OH AllocN OTES 80% N OTES CN O 17 O OH OH 1. 2. [Pd(PPh3)2Cl2] O nBu3SnH, H2O, CH2Cl2, 74% O OH O LiHMDS, 63% 2. 3HF•Et3N, THF 92% Me O HN OH O OH O OH Uncialamycin
  • 13. Synthesis of Biyouyanagin A (H. chinense L. var. salicifolium) • Isolated from the leaves of a Hypericum species in 2005. • Traditionally used as folk remedy for female disorders. • Shows significant activity against HIV and lipopolysaccharide-induced cytokine production. • Stereochemistry at C24, C17, C18 needs to be elucidated.
  • 14. Structural assignment of biyouyanagin A H H Me Me Me Me Me Me H H H O H H H O Me Me O O O O H Ph O H Ph O Me Me Originally proposed possible structures H H Me Me Me Me Me H H H O Me H 24 H H O Me Me 17 18 O O O O H Ph H Ph O Me O Me Nicolaou, K. C.; Sarlah, D.; Shaw, D. M. Angew. Chem. Int. Ed. 2007, 46, 4708-4711.
  • 15. Biyouyanagin A retrosynthesis H H Me Me Me Me Me O Me H H H O Me H Me [2 + 2] O O O O Ph H Ph O Me O Me
  • 16. Synthesis of the terpene-derived diene Cl Tf N N Tf Comins reagent
  • 17. Formation of the spirolactone
  • 18. [2+2] Photocycloaddition H H Me Me Me Me O Me Me H h , 2'-acetonaphthone H H H O Me Me CH2Cl2, rt, 5h O O O Ph 46% O O H Ph O Me Me H Me Me H Me OO Me O O Me (exo)