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Spatially Clustered Associations in Health GIS “mash-ups” Didier Leibovici 1 , Lucy Bastin 2 , Suchith Anand 1  , Jerry Swan 1 ,  Gobe Hobona 1  and Mike Jackson 1 1 Centre for Geospatial Sciences, University of Nottingham, UK 2 School of Engineering & Applied Science, Aston University, UK Tel. (+44(0)115 846 8408)  Fax (+44(0)115 951 5249) [email_address] Spatial Statistics, Multiway Data, Marked Point Process, Spatial Pattern, Spatial Interaction, Multi-Scale Analysis Co-Occurrences,
an historical perspective ,[object Object],[object Object],[object Object]
advanced conflation/analysis
Cluster detection  vs  Clustered associations ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Cluster detection  vs   Clustered associations ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],detecting clusters of multivariate associations between attributes of one or more populations localised spatially
a simple example  star   dot   square 3 spatial patterns from  3 point processes focus is on:  “ associations” ,  local profiles ??? ??? ??? e.g.  contagion factors
spatial associations ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],in a vicinity
[object Object],[object Object],spatial associations /  co-occurrences counts global & local The  Co-o ccurrences   at a chosen order , of attributes from the  same or different processes , build  multinomial distributions  at the root of  spatial organisation  and interactions  of processes according to:  the  collocation  d istance, and the order of collocation . see  Leibovici et al. (2008) (2009)  CAkOO   and  SOOk   methods for global / overall  “  ”
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],spatial associations /  co-occurrences counts in a vicinity x S V x S V x S V x S x S ScankOO package kOO  (to be finalised with   CAkOO, SOOk, selSOOk) d x “  ” d N x x S x x x x x x x x x x x x x x x x x x x x x x x x x x x x x x x x x x x x x x V x S x x
> library(spatstat) > source(“kOO.R”) ={“star”,“dot”,”square”} dot  square  star  47  46  50  1/HSu HSu Min  Q1  Median  Q3  Max  0.51  0.85  0.92  0.97  0.99 1/HsSu HsSu Min  Q1  Median  Q3  Max  0.13  0.59  0.86  0.94  1
chi2 minimum  ... “ “ independence” ”
-  +   1450    428   -1  - 3  - 5   + 1  +3   + 5   571  478   401   55  138   235  Epidemiological study Infectious   disease  dataset somewhere in UK 626 616 636 1000 878
more  -1  and less  +5   9.2% profile with same +3 and +5
relatively more +3 and less +5  reds higher odd  -  for 1 higher odd +  for 3  than blacks
 
SOOk analysis (global)
/21
150 subjects  0  Sept04-Feb05 3   5   -  59   7  +   5  4   /   Mar05-Aug05 3   5   -   50  8   +   12   5 <45  45-75  >75 3   5
conclusions and further work ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],package kOO  (to be finalised with   CAkOO, SOOk, selSOOk)

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3A_1_spatially clustered associations

  • 1. Spatially Clustered Associations in Health GIS “mash-ups” Didier Leibovici 1 , Lucy Bastin 2 , Suchith Anand 1 , Jerry Swan 1 , Gobe Hobona 1 and Mike Jackson 1 1 Centre for Geospatial Sciences, University of Nottingham, UK 2 School of Engineering & Applied Science, Aston University, UK Tel. (+44(0)115 846 8408) Fax (+44(0)115 951 5249) [email_address] Spatial Statistics, Multiway Data, Marked Point Process, Spatial Pattern, Spatial Interaction, Multi-Scale Analysis Co-Occurrences,
  • 2.
  • 4.
  • 5.
  • 6. a simple example star dot square 3 spatial patterns from 3 point processes focus is on: “ associations” , local profiles ??? ??? ??? e.g. contagion factors
  • 7.
  • 8.
  • 9.
  • 10. > library(spatstat) > source(“kOO.R”) ={“star”,“dot”,”square”} dot square star 47 46 50 1/HSu HSu Min Q1 Median Q3 Max 0.51 0.85 0.92 0.97 0.99 1/HsSu HsSu Min Q1 Median Q3 Max 0.13 0.59 0.86 0.94 1
  • 11. chi2 minimum ... “ “ independence” ”
  • 12. - + 1450 428 -1 - 3 - 5 + 1 +3 + 5 571 478 401 55 138 235 Epidemiological study Infectious disease dataset somewhere in UK 626 616 636 1000 878
  • 13. more -1 and less +5 9.2% profile with same +3 and +5
  • 14. relatively more +3 and less +5 reds higher odd - for 1 higher odd + for 3 than blacks
  • 15.  
  • 17. /21
  • 18. 150 subjects 0 Sept04-Feb05 3 5 - 59 7 + 5 4 / Mar05-Aug05 3 5 - 50 8 + 12 5 <45 45-75 >75 3 5
  • 19.

Notas do Editor

  1. Data mashups
  2. Efficient geoprocessing service vs pertinent statistical method /pertinent model
  3. Cluster detection /cluster association
  4. Cluster detection /cluster association