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Impact from applying innovation and optimising global
funding in support of research and innovation.
Prof Nigel Gibbens CBE, UK CVO
1.  Harnessing modelling in support of FMD control
2.  Applying new approaches to knowledge transfer
3.  Maintaining and making best use of global funding in
support of research and innovation
2
Overview
EU FMD open session 2016
UK experience of modelling in support of
FMD control
FMD modelling in 2001
•  Three models were used to predict the spread and control of the 2001
FMD epidemic
•  Developed prior to outbreak
•  InterSpread model (Morris et al. 2001)
•  Developed during outbreak
•  Cambridge-Edinburgh model (Keeling et al. 2001)
•  Imperial model (Ferguson et al. 2001)
5
2001: Models
UK experience of modelling in support of FMD control
2001: What worked well
•  Model ready for use – InterSpread model developed in
peacetime and available for use by MAFF
•  Good collaboration – MAFF & NZ InterSpread modelling group
•  Run-time and delivery of outputs – delivered to MAFF by
following morning
•  Modelling led to targeted control – identification of the unusual
and unexpected helped to better target controls
UK experience of modelling in support of FMD control 6
2001: What didn’t work well
•  Internal capability – no internal modelling capability existed within
MAFF
•  Engagement – limited engagement between MAFF and external
modellers in peacetime
•  Data – access to demographic data and understanding of case and
clinical data
•  Costs – costs associated with control options were not fully explored
by modelling
•  Challenge function – limited challenge function to external modelling
by internal government officials involved in outbreak control
UK experience of modelling in support of FMD control 7
8
FMD UK 2001: the epidemic curve
0
10
20
30
40
50
60
01-Feb
15-Feb
01-Mar
15-Mar
29-Mar
12-Apr
26-Apr
10-May
24-May
07-Jun
21-Jun
05-Jul
19-Jul
02-Aug
16-Aug
30-Aug
13-Sep
27-Sep
Numberofpremises
Week commencing
Estimated Infected Premises
Confirmed Infected Premises
Contiguous cull
Gibbens	&	Wilesmith.	Vet	Record	(2002)	151,	407-412	UK experience of modelling in support of FMD control
FMD modelling in 2016
2016: Lessons learnt from 2001
•  Capability – in-house epi & economic models; QM standing capacity
framework; meteorological model (NAME)
•  Engagement – annual modelling symposium; QUADS studies
•  Data – access to demographic data and outbreak reporting systems
•  Costs – integrated approach to epi and economic modelling
•  Commissioning and Challenge – ICF group, SAC-ED
•  QA – government guidelines for producing quality analysis for
government
UK experience of modelling in support of FMD control 10
2016: Integrated epi & economic outputs
11
2016: Economic breakdown
12
Modelling for decision-makers
Modelling for decision-makers
Value
•  Peacetime – developing strategies in preparation for an outbreak.
•  Outbreaks – predicting and evaluating the effectiveness of control
policies during an outbreak.
•  Integrated modelling – Epidemiology, Economics, Resource.
•  Communicating impact – visual communication of an outbreak
and the impact of control measures.
UK experience of modelling in support of FMD control 14
Limitations
•  Early in an outbreak – high uncertainty, expert judgement may be
more appropriate.
•  Not reality – they are an approximation of possible outcomes.
•  Limited certainty – communication of limitations.
•  Interpretation of outputs – beware the central estimate being
received and then presented as fact, without caveat.
•  One part of the decision-making process – many other
considerations for policy…
UK experience of modelling in support of FMD control 15
Modelling for decision-makers
Decision	
makers	
Modelling	
Veterinary	
Scien1fic	
Risk	
Assessment	
Legal	
Poli1cal	Public	
Industry/	
Other	
groups	
Risk	
Appe1te	
Epi	analysis	
Economic	
16EU FMD open session 2016
Challenges
•  Communicating uncertainty – especially important in the early
stages of an outbreak.
•  Data – access to real outbreak data.
•  Engagement with policy – trust in validity of models.
•  Engagement with external modellers – maintaining ongoing
communication and collaboration.
•  Conflicting advice/outcomes from models – what is right?
consensus may not be the correct approach.
17UK experience of modelling in support of FMD control
Modelling for decision-makers
Applying new approaches to
knowledge transfer
Overview
•  EuFMD online training platform
•  APHA training initiatives
•  National and regional disease exercises
•  Forward Look
Applying new approaches to knowledge transfer
EuFMD online training platform
FMD Emergency Preparation Course
(FEPC)
•  Flexible online interactive training delivery
•  Course runs over four weeks (approx. 12 hrs study in total)
•  Participants undertake training at their own speed and around
business as usual work
•  Experienced course tutors drawn from EuFMD, The Pirbright
Institute and APHA
•  Opening & closing webinars
•  Pre-course quiz
Applying new approaches to knowledge transfer
FEPC: content
•  Aetiology & Pathogenesis of FMD
•  Clinical & Laboratory Diagnosis
•  Epidemiological Investigation
•  Biosecurity
•  Scenario exercise
•  Interactive discussion forum for each module for tutors to pose (e.g.
differential diagnosis) and answer questions from participants
•  End of course assessment
•  CPD certificate (12 hours) awarded to participants who complete the
course and pass the assessment
Applying new approaches to knowledge transfer
FEPC: post course
•  Participants retain access to course content and a wide range of other
EuFMD resources after the course closes
•  Successful participants can also register to join EuFMD networks on:
o  FMD Modelling
o  FMD Contingency Planning
o  FMD Vaccination
•  Participation in other EuFMD webinars
•  Access to EuFMD monthly Global Reports
Applying new approaches to knowledge transfer
FEPC: Feedback
•  100% of participants would recommend the course to other UK
veterinary colleagues
•  Feedback at conclusion of both courses run so far demonstrated
an increase in confidence to be able to:
o  Recognise clinical FMD in pigs and ruminants
o  Collect the correct diagnostic samples
o  Undertake a detailed veterinary inquiry and collect essential
epidemiological information
Applying new approaches to knowledge transfer
National and regional disease
exercises
Disease Exercises
•  National Exercises:
•  FMD (2010)
•  CSF (2013)
•  FMD desktop (2015) to explore issues around decision to vaccinate
•  FMD desktop (2016) to explore resourcing for a large scale FMD
outbreak
Regular programme of regional exercises e.g. AI, Rabies, AHS
Applying new approaches to knowledge transfer
Forward Look
•  APHA Operations Manual currently available to all staff on-line and
can be downloaded onto laptops for out of hours access
•  Work in progress to develop a format compatible with waterproof,
disinfectable devices (e.g. tablets) for bio-secure use on farm
•  Access to operational instructions and ability to stream images and
commentary from suspect premises in ‘real time’
•  Facilitation of electronic capture and transmission of essential epi
information
•  Potential to develop training modules similar to EuFMD FEPC for
other major exotic notifiable diseases e.g. avian, swine fevers
Applying new approaches to knowledge transfer
Maintaining and making best use of global
funding in support of research and
innovation.
The Plowright high containment building at
Pirbright: Opened 2015
Maintaining and making best use of global funding in support of research and innovation 29
Current Challenges
•  Continued economic uncertainty since 2008
o  Contraction of public sector activities
o  Increasing difficulties in securing research funding for animal
health
•  Geopolitical instability
o  Impacting on veterinary services
o  Displacement of people and their animals
•  Increasing disease challenges
Maintaining and making best use of global funding in support of research and innovation 30
We	can’t	all	do	everything
EU FMD open session 2016 31
“Global	Strategic	Alliances	for	the	Coordina1on	of	
Research	on	the	Major	Infec1ous	Diseases	of	Animals	
and	Zoonoses”		
	
A	global	ini1a1ve	to	address	the	coordina1on	of	
research	programmes	at	interna1onal	level	in	the	
area	of	animal	health	and	in	par1cular	infec1ous	
animal	diseases	including	zoonoses.	
STAR-IDAZ Global Network for Animal
Disease Research
Maintaining	and	making	best	use	of	global	funding	in	support	of	research	and	innovaJon 32
Issues identified by the STAR-IDAZ foresight
activities needed to protect against future
challenges
•  Research pipeline – investment in basic research
•  Sound public polices relating to science and technology
•  Maintenance of capacity
•  Partnerships/collaborations are needed
•  Knowledge management system
•  Knowledge/technology transfer
The Research Pipeline
Maintaining	and	making	best	use	of	global	funding	in	support	of	research	and	innovaJon 33
International Research Consortium on Animal
Health (IRC)
Maintaining	and	making	best	use	of	global	funding	in	support	of	research	and	innovaJon 34
Initiative to coordinate research at the international level to contribute
to new and improved animal health strategies for at least 30 priority
diseases/infections/issues.
The deliverables include:
•  Candidate vaccines
•  Diagnostics
•  Therapeutics
•  Other animal health products and procedures
•  Key scientific information/tools to support risk analysis and disease
control
•  16 partners from 13 countries plus one international organisation
and three from industry with the EC planning to join
•  Total combined research budget of $US 2.5+ billion
•  IRC Secretariat supported by €3 million EU H2020 grant
IRC Governance Structure
Maintaining	and	making	best	use	of	global	funding	in	support	of	research	and	innovaJon 35
IRC	Execu1ve	CommiNee	
(Representa1ves	of	Funders)	
Secretariat	
(SIRCAH)	
Scien1fic	CommiNee	
Coronaviruses	
Emerging	
Issues	 One	Health	FMD	
Diagnos1cs	
ASF	
Influenza	
Innova1ve		
an1-infec1ve	
approaches	
Vector-borne	
diseases	 Brucellosis	
Bovine	
Tuberculosis	
Working	Groups	
Immunology/	
Vaccinology	
Mas11s	
Animal	gene1cs/	
genomics	 Foresight	 Epidemiology	
Helminths	
Porcine	
Respiratory	
Disease	Complex	
PRRSV	 ????	
STAR-IDAZ
IRC Launch
36Maintaining and making best use of global funding in support of research and innovation
IRC Partners (to date)
•  National funding bodies/Programme Owners
•  Research Institutes which function as Programme Owners
•  Pharmaceutical Industry
•  Representatives of the Diagnostic Industry
37Maintaining and making best use of global funding in support of research and innovation
Global FMD Research Alliance
38Maintaining and making best use of global funding in support of research and innovation
Further information on the STAR-IDAZ
International Research Consortium on
Animal Health (IRC)
www.star-idaz.net
STAR-IDAZ IRC Project Office
Alex Morrow or Luke Dalton
Defra, Area 5B, Nobel House, 17 Smith Square,
London SW1P 3JR
Alex.Morrow@Defra.gsi.gov.uk, Luke.Dalton@Defra.gsi.gov.uk
39Maintaining and making best use of global funding in support of research and innovation
1.  UK experience of modelling in support of FMD control
2.  Applying new approaches to knowledge transfer
3.  Maintaining and making best use of global funding in
support of research and innovation
40
Summary
EU FMD open session 2016

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OS16 - 5.2.a UK Experience of Modelling in Support of FMD Control, Applying New Approaches to Knowledge Transfer, and Tackling the Challenge of Maintaining and Making Best Use of Global Funding in Support of Research and Innovation - N. Gibbens

  • 1. Impact from applying innovation and optimising global funding in support of research and innovation. Prof Nigel Gibbens CBE, UK CVO
  • 2. 1.  Harnessing modelling in support of FMD control 2.  Applying new approaches to knowledge transfer 3.  Maintaining and making best use of global funding in support of research and innovation 2 Overview EU FMD open session 2016
  • 3. UK experience of modelling in support of FMD control
  • 5. •  Three models were used to predict the spread and control of the 2001 FMD epidemic •  Developed prior to outbreak •  InterSpread model (Morris et al. 2001) •  Developed during outbreak •  Cambridge-Edinburgh model (Keeling et al. 2001) •  Imperial model (Ferguson et al. 2001) 5 2001: Models UK experience of modelling in support of FMD control
  • 6. 2001: What worked well •  Model ready for use – InterSpread model developed in peacetime and available for use by MAFF •  Good collaboration – MAFF & NZ InterSpread modelling group •  Run-time and delivery of outputs – delivered to MAFF by following morning •  Modelling led to targeted control – identification of the unusual and unexpected helped to better target controls UK experience of modelling in support of FMD control 6
  • 7. 2001: What didn’t work well •  Internal capability – no internal modelling capability existed within MAFF •  Engagement – limited engagement between MAFF and external modellers in peacetime •  Data – access to demographic data and understanding of case and clinical data •  Costs – costs associated with control options were not fully explored by modelling •  Challenge function – limited challenge function to external modelling by internal government officials involved in outbreak control UK experience of modelling in support of FMD control 7
  • 8. 8 FMD UK 2001: the epidemic curve 0 10 20 30 40 50 60 01-Feb 15-Feb 01-Mar 15-Mar 29-Mar 12-Apr 26-Apr 10-May 24-May 07-Jun 21-Jun 05-Jul 19-Jul 02-Aug 16-Aug 30-Aug 13-Sep 27-Sep Numberofpremises Week commencing Estimated Infected Premises Confirmed Infected Premises Contiguous cull Gibbens & Wilesmith. Vet Record (2002) 151, 407-412 UK experience of modelling in support of FMD control
  • 10. 2016: Lessons learnt from 2001 •  Capability – in-house epi & economic models; QM standing capacity framework; meteorological model (NAME) •  Engagement – annual modelling symposium; QUADS studies •  Data – access to demographic data and outbreak reporting systems •  Costs – integrated approach to epi and economic modelling •  Commissioning and Challenge – ICF group, SAC-ED •  QA – government guidelines for producing quality analysis for government UK experience of modelling in support of FMD control 10
  • 11. 2016: Integrated epi & economic outputs 11
  • 14. Modelling for decision-makers Value •  Peacetime – developing strategies in preparation for an outbreak. •  Outbreaks – predicting and evaluating the effectiveness of control policies during an outbreak. •  Integrated modelling – Epidemiology, Economics, Resource. •  Communicating impact – visual communication of an outbreak and the impact of control measures. UK experience of modelling in support of FMD control 14
  • 15. Limitations •  Early in an outbreak – high uncertainty, expert judgement may be more appropriate. •  Not reality – they are an approximation of possible outcomes. •  Limited certainty – communication of limitations. •  Interpretation of outputs – beware the central estimate being received and then presented as fact, without caveat. •  One part of the decision-making process – many other considerations for policy… UK experience of modelling in support of FMD control 15 Modelling for decision-makers
  • 17. Challenges •  Communicating uncertainty – especially important in the early stages of an outbreak. •  Data – access to real outbreak data. •  Engagement with policy – trust in validity of models. •  Engagement with external modellers – maintaining ongoing communication and collaboration. •  Conflicting advice/outcomes from models – what is right? consensus may not be the correct approach. 17UK experience of modelling in support of FMD control Modelling for decision-makers
  • 18. Applying new approaches to knowledge transfer
  • 19. Overview •  EuFMD online training platform •  APHA training initiatives •  National and regional disease exercises •  Forward Look Applying new approaches to knowledge transfer
  • 21. FMD Emergency Preparation Course (FEPC) •  Flexible online interactive training delivery •  Course runs over four weeks (approx. 12 hrs study in total) •  Participants undertake training at their own speed and around business as usual work •  Experienced course tutors drawn from EuFMD, The Pirbright Institute and APHA •  Opening & closing webinars •  Pre-course quiz Applying new approaches to knowledge transfer
  • 22. FEPC: content •  Aetiology & Pathogenesis of FMD •  Clinical & Laboratory Diagnosis •  Epidemiological Investigation •  Biosecurity •  Scenario exercise •  Interactive discussion forum for each module for tutors to pose (e.g. differential diagnosis) and answer questions from participants •  End of course assessment •  CPD certificate (12 hours) awarded to participants who complete the course and pass the assessment Applying new approaches to knowledge transfer
  • 23. FEPC: post course •  Participants retain access to course content and a wide range of other EuFMD resources after the course closes •  Successful participants can also register to join EuFMD networks on: o  FMD Modelling o  FMD Contingency Planning o  FMD Vaccination •  Participation in other EuFMD webinars •  Access to EuFMD monthly Global Reports Applying new approaches to knowledge transfer
  • 24. FEPC: Feedback •  100% of participants would recommend the course to other UK veterinary colleagues •  Feedback at conclusion of both courses run so far demonstrated an increase in confidence to be able to: o  Recognise clinical FMD in pigs and ruminants o  Collect the correct diagnostic samples o  Undertake a detailed veterinary inquiry and collect essential epidemiological information Applying new approaches to knowledge transfer
  • 25. National and regional disease exercises
  • 26. Disease Exercises •  National Exercises: •  FMD (2010) •  CSF (2013) •  FMD desktop (2015) to explore issues around decision to vaccinate •  FMD desktop (2016) to explore resourcing for a large scale FMD outbreak Regular programme of regional exercises e.g. AI, Rabies, AHS Applying new approaches to knowledge transfer
  • 27. Forward Look •  APHA Operations Manual currently available to all staff on-line and can be downloaded onto laptops for out of hours access •  Work in progress to develop a format compatible with waterproof, disinfectable devices (e.g. tablets) for bio-secure use on farm •  Access to operational instructions and ability to stream images and commentary from suspect premises in ‘real time’ •  Facilitation of electronic capture and transmission of essential epi information •  Potential to develop training modules similar to EuFMD FEPC for other major exotic notifiable diseases e.g. avian, swine fevers Applying new approaches to knowledge transfer
  • 28. Maintaining and making best use of global funding in support of research and innovation.
  • 29. The Plowright high containment building at Pirbright: Opened 2015 Maintaining and making best use of global funding in support of research and innovation 29
  • 30. Current Challenges •  Continued economic uncertainty since 2008 o  Contraction of public sector activities o  Increasing difficulties in securing research funding for animal health •  Geopolitical instability o  Impacting on veterinary services o  Displacement of people and their animals •  Increasing disease challenges Maintaining and making best use of global funding in support of research and innovation 30 We can’t all do everything
  • 31. EU FMD open session 2016 31 “Global Strategic Alliances for the Coordina1on of Research on the Major Infec1ous Diseases of Animals and Zoonoses” A global ini1a1ve to address the coordina1on of research programmes at interna1onal level in the area of animal health and in par1cular infec1ous animal diseases including zoonoses. STAR-IDAZ Global Network for Animal Disease Research
  • 32. Maintaining and making best use of global funding in support of research and innovaJon 32 Issues identified by the STAR-IDAZ foresight activities needed to protect against future challenges •  Research pipeline – investment in basic research •  Sound public polices relating to science and technology •  Maintenance of capacity •  Partnerships/collaborations are needed •  Knowledge management system •  Knowledge/technology transfer
  • 34. International Research Consortium on Animal Health (IRC) Maintaining and making best use of global funding in support of research and innovaJon 34 Initiative to coordinate research at the international level to contribute to new and improved animal health strategies for at least 30 priority diseases/infections/issues. The deliverables include: •  Candidate vaccines •  Diagnostics •  Therapeutics •  Other animal health products and procedures •  Key scientific information/tools to support risk analysis and disease control •  16 partners from 13 countries plus one international organisation and three from industry with the EC planning to join •  Total combined research budget of $US 2.5+ billion •  IRC Secretariat supported by €3 million EU H2020 grant
  • 35. IRC Governance Structure Maintaining and making best use of global funding in support of research and innovaJon 35 IRC Execu1ve CommiNee (Representa1ves of Funders) Secretariat (SIRCAH) Scien1fic CommiNee Coronaviruses Emerging Issues One Health FMD Diagnos1cs ASF Influenza Innova1ve an1-infec1ve approaches Vector-borne diseases Brucellosis Bovine Tuberculosis Working Groups Immunology/ Vaccinology Mas11s Animal gene1cs/ genomics Foresight Epidemiology Helminths Porcine Respiratory Disease Complex PRRSV ???? STAR-IDAZ
  • 36. IRC Launch 36Maintaining and making best use of global funding in support of research and innovation
  • 37. IRC Partners (to date) •  National funding bodies/Programme Owners •  Research Institutes which function as Programme Owners •  Pharmaceutical Industry •  Representatives of the Diagnostic Industry 37Maintaining and making best use of global funding in support of research and innovation
  • 38. Global FMD Research Alliance 38Maintaining and making best use of global funding in support of research and innovation
  • 39. Further information on the STAR-IDAZ International Research Consortium on Animal Health (IRC) www.star-idaz.net STAR-IDAZ IRC Project Office Alex Morrow or Luke Dalton Defra, Area 5B, Nobel House, 17 Smith Square, London SW1P 3JR Alex.Morrow@Defra.gsi.gov.uk, Luke.Dalton@Defra.gsi.gov.uk 39Maintaining and making best use of global funding in support of research and innovation
  • 40. 1.  UK experience of modelling in support of FMD control 2.  Applying new approaches to knowledge transfer 3.  Maintaining and making best use of global funding in support of research and innovation 40 Summary EU FMD open session 2016