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A CONTENT EVALUATION OF THE PROCEEDINGS OF THE 4th
ALL
AFRICA CONFERENCE ON ANIMAL AGRICULTURE (AACAA):
AN UNSUPERVISED LEXIMANCER™ ANALYSIS
5th
AACAA, Addis Ababa: Ethiopia, 25-28 October 2010
Percy Madzivhandila and Garry Griffith
Presentation Outline
• Introduction
• Gaps and an Opportunity
• Aim
• Research Questions
• Data and Method
• Results
• Brief Discussion
• Conclusions
• Study Limitations
Introduction
• AACAA allow researchers to further develop and
showcase their work
• After the conference is over, very little is known
about lessons learned at the aggregate level
• Available information management and
knowledge generation technologies are not used
in this context
– i.e., Animal Agriculture & conference proceedings
Gaps and an Opportunity
• Generation of knowledge [from the proceedings] can be
daunting and it is often difficult to synthesize and validate
(Hearst 1999, 2003; Smith and Humphreys 2006):
– Magnitude and diversity of contributed papers
– The limitation of a person’s reading speed ability
– Lack the resources (or knowledge about such tools) to analyse
large text data objectively
– Problem with human subjectivity when analyzing text data
• Therefore, unsupervised text data mining methods are
entering knowledge generation lexicon (Lin and Richi
2007; Smith 2000, 2003)
Aim
• To identify and analyse recurring issues
raised to address the 4th
AACAA theme
– The theme was: The role of biotechnology in
animal agriculture to address poverty in
Africa: Opportunities and challenges.
Research Questions
• What messages emerged (i.e., lessons)
from the 4th
AACAA conference
proceedings?
• What is the potential of Leximancer™ in
establishing credible conference
messages and/or lessons?
Data
• The entire proceedings from the 4th
AACAA (Arusha, Tanzania)
– Edited by Rege et al. (2006)
Method
• Approach: Unsupervised text data mining technique
– No predetermined categories were imposed on the data through
coding
• Computer software used: Leximancer™ (see www.leximancer.com)
1. Editing of concepts
– It is possible within the software to delete, combine or add new
concepts, However:
• The decision was made to retain only those concepts identified by
the software.
• But the concepts that are similar semantically (i.e., in singular and
plural forms) were merged
2. Data analysis
– Concept maps were augmented by using a three slide bars
embedded in the software to adjust theme size, concept points size
and rotation
Results
The entire analysis allowed us to illustrate five
types of information :
• The central theme(s)
• The main concepts (set at 20% concept size)
• The thematic group of concepts that
demonstrate similarity (i.e., clusters)
• Frequency within which these concepts occur
(i.e., ranking)
• Frequency of co-occurring concepts
Results 1: Underpinning Themes
Results 2: Main Concepts
Results 3: Thematic & Concepts Map
Results 4: Ranked Concepts
#
Concept
Absolute
Count
Relative
Count
1 animals 771 100%
2 livestock 573 74.3%
3 production 516 66.9%
4 research 452 58.6%
5 countries 364 47.2%
6 biotechnology 350 45.3%
7 development 346 44.8%
8 milk 339 43.9%
9 genetic 330 42.8%
10 level 315 40.8%
11 systems 305 39.5%
12 breeds 295 38.2%
13 Africa 280 36.3%
14 cattle 274 35.5%
15 products 269 34.8%
16 farmers 264 34.2%
17 Proceedings 255 33%
18 disease 238 30.8%
19 health 229 29.7%
20 goat 228 29.5%
21 information 215 27.8%
22 food 214 27.7%
23 study 205 26.5%
24 African 198 25.6%
25 resources 191 24.7%
Results 5: Co-occurrence of Concepts
Animal(s)
Concept Absolute Count Relative Count
1 livestock 218 28.2%
2 production 178 23%
3 genetic 149 19.3%
4 health 147 19%
5 research 130 16.8%
6 biotechnology 128 16.6%
7 disease 109 14.1%
8 countries 101 13%
9 development 96 12.4%
10 products 93 12%
11 resources 91 11.8%
12 breeds 85 11%
13 systems 84 10.8%
14 food 76 9.8%
15 farmers 75 9.7%
16 cattle 75 9.7%
17 Africa 74 9.5%
18 milk 70 9%
19 potential 69 8.9%
20 indigenous 66 8.5%
21 level 66 8.5%
22 breeding 63 8.1%
23 agriculture 57 7.3%
24 human 56 7.2%
25 National 54 7.0%
Results 5: Co-occurrence of Concepts
Milk
Concept Absolute Count Relative Count
1 production 103 30.3%
2 goat 86 25.3%
3 animals 70 20.6%
4 dairy 59 17.4%
5 meat 56 16.5%
6 protein 52 15.3%
7 level 51 15%
8 products 47 13.8%
9 cows 43 12.6%
10 cattle 39 11.5%
11 study 37 10.9%
12 livestock 36 10.6%
13 systems 35 10.3%
14 quality 34 10%
15 farmers 32 9.4%
16 high 30 8.8%
17 breeds 29 8.5%
18 Africa 29 8.5%
19 control 25 7.3%
20 genetic 23 6.7%
21 human 22 6.4%
22 countries 21 6.1%
23 health 20 5.8%
24 small 20 5.8%
25 food 20 5.8%
Concept
Absolute
Count
Relative
Count
1 animals 128 36.5%
2 research 122 34.8%
3 livestock 110 31.4%
4 countries 82 23.4%
5 development 77 22%
6 production 68 19.4%
7 products 67 19.1%
8 application 57 16.2%
9 health 56 16%
10 Africa 51 14.5%
11 food 47 13.4%
12 national 45 12.8%
13 agricultural 42 12%
14 genetic 42 12%
15 poor 41 11.7%
16 agriculture 41 11.7%
17 potential 40 11.4%
18 developing 40 11.4%
19 resources 39 11.1%
20 poverty 38 10.8%
20 science 36 10.2%
21 human 35 10%
22 issues 32 9.1%
23 international 31 8.8%
24 African 29 8.2%
25 risk 29 8.2%
Results 5: Co-occurrence of Concepts
Biotechnology
Discussion
• Leximancer™ Version 2.25 (2005) was able to deal with large
amounts of unstructured text data
– It extracted previously unknown, useful and important
concepts and categorized the information that might be
missed by manual methods
• It easily enabled us to provide information about the
results of the content analysis in a number of ways
– E.g., superimposing of thematic circles enriched the viewing of
the initial analytic description
• It enabled us to discover information within the document
objectively without being influenced by human biases
Conclusion
• This study results can provide a most
valued learning environment for policy
makers, decision makers and practitioners
– A message at the aggregate level nexus
• We posit that Leximancer™ has an
established role in the content analysis of
large and diverse text data
Study Limitations
• Analysis does not purport to be a
complete analysis of the proceedings
– The results reported are by no means
exhaustive
• The study does not claim to represent the
intentions of the authors of the
proceedings' papers
Thank You
References
• Hearst, M. (1999), 'Untangling Text Data Mining'. <
http://people.ischool.berkeley.edu/~hearst/papers/acl99/acl99-tdm.html>, accessed 18 May 2010.
• --- (2003), 'What is Text Mining?'. <http://www.ischool.berkeley.edu/~hearst/textmining.html.>,
accessed 18 May 2010.
• Leximancer (2005), 'Leximancer Version 2.25 Manual'. <<
http://www.leximancer.com/documents/Leximancer2_Manual.pdf.>>, accessed 12 May 2010.
• Lin, C. and Richi, N. (2007), 'A Case Study of Failure Mode Analysis with Text Mining Methods',
in K.-L. Ong, W. Li; and J. Gao (eds.), 2nd International Workshop on Integrating Artificial
Intelligence and Data Mining (AIDM) (Gold Coast, Queensland: CRPIT), 49-60.
• Smith, A. E. (2000), 'Machine Mapping of Document Collections: the Leximancer System', The
5th Australasian Document Computing Symposium (Sunshine Coast, Queensland: Australasian
Document Computing Symposium).
• --- (2003), 'Automatic extraction of semantic networks from text using Leximancer', The North
American Chapter of the Association for Computational Linguistics (HLT-NAACL) (Edmonton,
ACL: HLT-NAACL), 23-24.
• Smith, A.E. and Humphreys, M.R. (2006), 'Evaluation of unsupervised semantic mapping of
natural language with Leximancer concept mapping', Behaviour Research Methods, 38 (2), 262-
79.
• Rege, J.E.O.; Nyamu A.M. and Sendali, G. (eds) (2005), ‘The role of biotechnology in animal
agriculture to address poverty in Africa: Opportunities and challenges’, Proceedings of the 4th
All
Africa Conference on Animal agriculture and the 31st
Annual Meeting of the Tanzania Society
for Animal Production (Arusha:AACAA)

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Leximancer Analysis of 4th AACAA Conference Proceedings

  • 1. A CONTENT EVALUATION OF THE PROCEEDINGS OF THE 4th ALL AFRICA CONFERENCE ON ANIMAL AGRICULTURE (AACAA): AN UNSUPERVISED LEXIMANCER™ ANALYSIS 5th AACAA, Addis Ababa: Ethiopia, 25-28 October 2010 Percy Madzivhandila and Garry Griffith
  • 2. Presentation Outline • Introduction • Gaps and an Opportunity • Aim • Research Questions • Data and Method • Results • Brief Discussion • Conclusions • Study Limitations
  • 3. Introduction • AACAA allow researchers to further develop and showcase their work • After the conference is over, very little is known about lessons learned at the aggregate level • Available information management and knowledge generation technologies are not used in this context – i.e., Animal Agriculture & conference proceedings
  • 4. Gaps and an Opportunity • Generation of knowledge [from the proceedings] can be daunting and it is often difficult to synthesize and validate (Hearst 1999, 2003; Smith and Humphreys 2006): – Magnitude and diversity of contributed papers – The limitation of a person’s reading speed ability – Lack the resources (or knowledge about such tools) to analyse large text data objectively – Problem with human subjectivity when analyzing text data • Therefore, unsupervised text data mining methods are entering knowledge generation lexicon (Lin and Richi 2007; Smith 2000, 2003)
  • 5. Aim • To identify and analyse recurring issues raised to address the 4th AACAA theme – The theme was: The role of biotechnology in animal agriculture to address poverty in Africa: Opportunities and challenges.
  • 6. Research Questions • What messages emerged (i.e., lessons) from the 4th AACAA conference proceedings? • What is the potential of Leximancer™ in establishing credible conference messages and/or lessons?
  • 7. Data • The entire proceedings from the 4th AACAA (Arusha, Tanzania) – Edited by Rege et al. (2006)
  • 8. Method • Approach: Unsupervised text data mining technique – No predetermined categories were imposed on the data through coding • Computer software used: Leximancer™ (see www.leximancer.com) 1. Editing of concepts – It is possible within the software to delete, combine or add new concepts, However: • The decision was made to retain only those concepts identified by the software. • But the concepts that are similar semantically (i.e., in singular and plural forms) were merged 2. Data analysis – Concept maps were augmented by using a three slide bars embedded in the software to adjust theme size, concept points size and rotation
  • 9. Results The entire analysis allowed us to illustrate five types of information : • The central theme(s) • The main concepts (set at 20% concept size) • The thematic group of concepts that demonstrate similarity (i.e., clusters) • Frequency within which these concepts occur (i.e., ranking) • Frequency of co-occurring concepts
  • 11. Results 2: Main Concepts
  • 12. Results 3: Thematic & Concepts Map
  • 13. Results 4: Ranked Concepts # Concept Absolute Count Relative Count 1 animals 771 100% 2 livestock 573 74.3% 3 production 516 66.9% 4 research 452 58.6% 5 countries 364 47.2% 6 biotechnology 350 45.3% 7 development 346 44.8% 8 milk 339 43.9% 9 genetic 330 42.8% 10 level 315 40.8% 11 systems 305 39.5% 12 breeds 295 38.2% 13 Africa 280 36.3% 14 cattle 274 35.5% 15 products 269 34.8% 16 farmers 264 34.2% 17 Proceedings 255 33% 18 disease 238 30.8% 19 health 229 29.7% 20 goat 228 29.5% 21 information 215 27.8% 22 food 214 27.7% 23 study 205 26.5% 24 African 198 25.6% 25 resources 191 24.7%
  • 14. Results 5: Co-occurrence of Concepts Animal(s) Concept Absolute Count Relative Count 1 livestock 218 28.2% 2 production 178 23% 3 genetic 149 19.3% 4 health 147 19% 5 research 130 16.8% 6 biotechnology 128 16.6% 7 disease 109 14.1% 8 countries 101 13% 9 development 96 12.4% 10 products 93 12% 11 resources 91 11.8% 12 breeds 85 11% 13 systems 84 10.8% 14 food 76 9.8% 15 farmers 75 9.7% 16 cattle 75 9.7% 17 Africa 74 9.5% 18 milk 70 9% 19 potential 69 8.9% 20 indigenous 66 8.5% 21 level 66 8.5% 22 breeding 63 8.1% 23 agriculture 57 7.3% 24 human 56 7.2% 25 National 54 7.0%
  • 15. Results 5: Co-occurrence of Concepts Milk Concept Absolute Count Relative Count 1 production 103 30.3% 2 goat 86 25.3% 3 animals 70 20.6% 4 dairy 59 17.4% 5 meat 56 16.5% 6 protein 52 15.3% 7 level 51 15% 8 products 47 13.8% 9 cows 43 12.6% 10 cattle 39 11.5% 11 study 37 10.9% 12 livestock 36 10.6% 13 systems 35 10.3% 14 quality 34 10% 15 farmers 32 9.4% 16 high 30 8.8% 17 breeds 29 8.5% 18 Africa 29 8.5% 19 control 25 7.3% 20 genetic 23 6.7% 21 human 22 6.4% 22 countries 21 6.1% 23 health 20 5.8% 24 small 20 5.8% 25 food 20 5.8%
  • 16. Concept Absolute Count Relative Count 1 animals 128 36.5% 2 research 122 34.8% 3 livestock 110 31.4% 4 countries 82 23.4% 5 development 77 22% 6 production 68 19.4% 7 products 67 19.1% 8 application 57 16.2% 9 health 56 16% 10 Africa 51 14.5% 11 food 47 13.4% 12 national 45 12.8% 13 agricultural 42 12% 14 genetic 42 12% 15 poor 41 11.7% 16 agriculture 41 11.7% 17 potential 40 11.4% 18 developing 40 11.4% 19 resources 39 11.1% 20 poverty 38 10.8% 20 science 36 10.2% 21 human 35 10% 22 issues 32 9.1% 23 international 31 8.8% 24 African 29 8.2% 25 risk 29 8.2% Results 5: Co-occurrence of Concepts Biotechnology
  • 17. Discussion • Leximancer™ Version 2.25 (2005) was able to deal with large amounts of unstructured text data – It extracted previously unknown, useful and important concepts and categorized the information that might be missed by manual methods • It easily enabled us to provide information about the results of the content analysis in a number of ways – E.g., superimposing of thematic circles enriched the viewing of the initial analytic description • It enabled us to discover information within the document objectively without being influenced by human biases
  • 18. Conclusion • This study results can provide a most valued learning environment for policy makers, decision makers and practitioners – A message at the aggregate level nexus • We posit that Leximancer™ has an established role in the content analysis of large and diverse text data
  • 19. Study Limitations • Analysis does not purport to be a complete analysis of the proceedings – The results reported are by no means exhaustive • The study does not claim to represent the intentions of the authors of the proceedings' papers
  • 21. References • Hearst, M. (1999), 'Untangling Text Data Mining'. < http://people.ischool.berkeley.edu/~hearst/papers/acl99/acl99-tdm.html>, accessed 18 May 2010. • --- (2003), 'What is Text Mining?'. <http://www.ischool.berkeley.edu/~hearst/textmining.html.>, accessed 18 May 2010. • Leximancer (2005), 'Leximancer Version 2.25 Manual'. << http://www.leximancer.com/documents/Leximancer2_Manual.pdf.>>, accessed 12 May 2010. • Lin, C. and Richi, N. (2007), 'A Case Study of Failure Mode Analysis with Text Mining Methods', in K.-L. Ong, W. Li; and J. Gao (eds.), 2nd International Workshop on Integrating Artificial Intelligence and Data Mining (AIDM) (Gold Coast, Queensland: CRPIT), 49-60. • Smith, A. E. (2000), 'Machine Mapping of Document Collections: the Leximancer System', The 5th Australasian Document Computing Symposium (Sunshine Coast, Queensland: Australasian Document Computing Symposium). • --- (2003), 'Automatic extraction of semantic networks from text using Leximancer', The North American Chapter of the Association for Computational Linguistics (HLT-NAACL) (Edmonton, ACL: HLT-NAACL), 23-24. • Smith, A.E. and Humphreys, M.R. (2006), 'Evaluation of unsupervised semantic mapping of natural language with Leximancer concept mapping', Behaviour Research Methods, 38 (2), 262- 79. • Rege, J.E.O.; Nyamu A.M. and Sendali, G. (eds) (2005), ‘The role of biotechnology in animal agriculture to address poverty in Africa: Opportunities and challenges’, Proceedings of the 4th All Africa Conference on Animal agriculture and the 31st Annual Meeting of the Tanzania Society for Animal Production (Arusha:AACAA)