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Chemistry Annotation Tool Diego Bragato [email_address]
A custom ETL tool and a metadata editor ,[object Object],[object Object],[object Object],[object Object],[object Object]
The patent chemistry business case ,[object Object],[object Object],[object Object],[object Object]
Opening the tool
One pencil for each annotation type
Select an entity to annotate “a compound”
Enrich annotation and save
Annotate different entities and enrich through external lookup “CHEBI:16336”
Automated lookups for Multiple annotations in the text
Enrich with Relations annotation
Relations Selection  “Hyaluronic Acid”
Class selection  “Natural Mucopolysaccharide”
Enriched with: “Hyaluronic acid” is a “natural mucopolysaccharide” “Sodium Hyaluronan” is a “Hyaluronic Acid”
Text to ontology selection
Text to ontology annotation “Hyaluronic acid is a molecular entity”
Features ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
To improve ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Must have ,[object Object],[object Object],[object Object],[object Object]
Nice to have ,[object Object],[object Object],[object Object],[object Object],[object Object]

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Patent Annotation Tool