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MUST TO KNOW IN CLINICAL CHEMISTRY
                                        (From CC by Rodriguez)
                                            Quality Control
Practicability             Method is easily repeated
Reliability                Maintain accuracy and precision
Intralab/Interlab QC       Daily monitoring of accuracy and precision
Interlab/External QC       Proficiency testing (Reference lab)
                           Long-term accuracy
                           Difference of >2: not in agreement w/ other lab
QC materials               Available for a min. of 1 yr
Bovine control materials   Preferred (Human: biohazard)
                           Not for immunochem, dye-binding and bilirubin
Matrix effect              Improper product manufacturing
                           Unpurified analyte
                           Altered protein
Precision study            First step in method evaluation
Nonlab. personnel          29% of errors (lab results)
SD                         Dispersion of values from the mean
CV                         Index of precision
                           Relative magnitude of variability (%)
Variance                   SD2
                           Measure of variability
Inferential statistics     Compare means or SD of 2 groups of data
T-test                     Means of 2 groups of data
F-test                     SD of 2 groups of data
Cumulative Sum Graph       V-mask
(CUSUM)                    Earliest indication of systematic errors (trend)
Youden/Twin Plot           Compare results obtained from diff. lab
Shewhart Levey-Jennings    Graphic representation of the acceptable limits of variation
Chart
Trend                      Gradual loss of reliability
                           Cause: Deterioration of reagents (Systematic error)
Shift                      Values: one side or either side of the mean
                           Cause: Improper calibration (Systematic error)
Outliers                   Values: far from the main set of values
                           Highly deviating values
                           Random or systematic errors
Kurtosis                   Degree of flatness or sharpness
Precision                  Random error
Accuracy                   Systematic error
Random error               Causes:
(Imprecision;              -Mislabeling
Indeterminate)             -Pipetting error
                           -Improper mixing of sample and reagents
                           -Voltage/Temperature fluctuation
                           -Dirty optics
                           Parameters: SD and CV
Systematic error           Causes:
(Inaccuracy/Determinate)   -Improper calibration
                           -Deterioration of reagents
                           -Contaminated solution
                           -Sample instability/unstable reagent blanks
                                                                                          lec.mt 04 |Page | 1
-Diminishing lamp power
                               -Incorrect sample and reagent volume
                               Parameter: Mean
Multirule Shewhart             Control rules + Control chart
procedure
Test method                    Westgard: at least 40 samples
Reference method               Westgard: preferably 100 samples
Analytical Run                 Control and patient specimens assayed, evaluated, and report together
Physiologic Limit              Referred to as absurd value
POCT                           Performed by nonlab personnel
Quality Assurance              Tripod:
                               Program development
                               Assessment and monitoring
                               Quality improvement
Quality Patient Care           Test request forms, clear instruction for patient prep., specimen handling…
Reference Range/ Interval      At least 120 individuals should be tested in each age and sex category
Range/ Reference Values
                                              Analytical Methods
Wavelength                     Distance bet 2 successive peaks (nm)
                               Lower frequency = Longer wavelength (Ex. Red)
                               Higher frequency = Shorter wavelength (Ex. Violet)
Spectrophotometric meas.       Meas. light intensity in a narrower wavelength
Photometric measurement        Meas. light intensity w/o consideration of wavelength
                               Multiple wavelength (uses filter only)
LASER                          Light Amplification by Stimulated Emission of Radiation
                               Light source for spectrophotometry
Visible region                 Tungsten light bulb
                               Mercury arc
UV                             Deuterium lamp
                               Mercury arc
                               Xenon lamp
                               Hydrogen lamp
IR                             Merst glower
                               Globar (Silicone carbide)
Stray light                    Wavelength outside the band
                               Most common cause of loss of linearity
Diffraction gratings           Most commonly used monochromator
                               Cutting grooves
Prisms                         Rotatable
Nickel sulfate                 Prevents stray light
Cutoff filter                  Anti-stray light
Bandpass                       ½ peak transmittance
Alumina silica glass cuvet     Most commonly used cuvet
Quartz/plastic cuvet           UV
Borosilicate glass cuvet       Strong bases
Photodetector                  Converts transmitted light into photoelectric energy
Barrier layer cell/            Simplest detector
photocell/ photovoltaic cell   No external voltage
                               For filter photometers
Phototube                      Contains anode and cathode
                               Req external voltage
Photomultiplier tube           Most common type
                                                                                            lec.mt 04 |Page | 2
Most sensitive
                           UV and visible region
Galvanometer/Ammeter       Meter or read-out device
Absorbance                 A = abc (a = absorptivity; b = length of light (1cm); c = concentration)
                           A = 2 – log%T
Double beam spectro.       Splits monochromatic light into two components:
                           One beam  sample
                           One beam  reference soln or blank (corrects for variation in light source
                           intensity)
Double-beam in space       2 photodetectors (sample beam and reference beam)
Double-beam in time        1 photodetector
                           Monochromatic light  sample cuvet and reference cuvet
Dydimium filter            600 nm
Holmium oxide filter       360 nm
Reagent blank              Color of reagents
Sample blank               Optical interference (Hgb)
FEP                        Meas. light emitted by a single atom burned in a flame
                           Principle: Excitation
                           Lt. source and cuvette: Flame
                           For excited ions (Na+, K+)
Cesium and Lithium         Internal standards (FEP)
                           Correct variations in flame
Lithium                    Preferred internal std
                           Potent antidepressant
AAS                        Meas. light absorbed by atoms dissociated by heat
                           Principle: Dissociation (unionized, unexcited, ground state)
                           Lt. source: Hollow-cathode lamp
                           For unexcited trace metals (Ca++ and Mg++)
                           More sensitive than FEP
Atomizer (nebulizer)       Convert ions  atoms
Chopper                    Modulate the light source
Lanthanum/Strontium        Complex with phosphate
chloride                   Avoid calcium interference
Volumetric (Titrimetric)   Unknown sample is made to react with a known solution in the presence of an
                           indicator
Turbidimetry               Light blocked
                           Meas. abundant large particles (Proteins)
                           Depend on specimen concentration and particle size
Nephelometry               Meas. amt of Ag-Ab complexes
                           Scattered light
                           Depends on wavelength and particle size
Electrophoresis            Migration of charged particles in an electric field
Iontophoresis              Migration of small charged ions
Zone electrophoresis       Migration of charged macromolecules
Endosmosis                 Movement of buffer ions and solvent relative to the fixed support
                           Ex: gamma globulins
Cellulose acetate          Molecular size
Agarose gel                Electrical charge
Polyacrylamide gel         Charge and molecular size
                           20 fractions (ex. isoenzymes)
Electrophoretic mobility   Directly proportional to net charge
                           Inversely proportional to molecular size & viscosity of the supporting medium
                                                                                       lec.mt 04 |Page | 3
Isoelectric focusing          Molecules migrate through a pH gradient
                              pH = pI
                              For isoenzymes: same size, different charge
Densitometry                  Scan & quantitate electrophoretic pattern
Capillary electrophoresis     Electro-osmotic flow
Southern blot                 DNA
Northern blot                 RNA
Western blot                  Proteins
Chromatography                Separation by specific differences in physical-chemical characteristics of the
                              different constituents
Paper chromatography          Fractionation of sugar and amino acid
                              Sorbent: Whatman paper
TLC                           Screening: Drugs
Retention factor (Rf) value   Relative distance of migration from the point of application
                              Rf = Distance leading edge of component moves
                                       Total distance solvent front moves
Gas chromatography            Separation of steroids, barbiturates, blood, alcohol, and lipids
                              Volatile compounds
                              Specimens  vaporized
                              Mobile phase: Inert gases
Gas Solid chromatography      Differences in absorption at the solid phase surfaces
Gas Liquid chromatography     Differences in solute partitioning between the gaseous mobile phase and the
                              liquid stationary phase
Mass Spectrometry             Fragmentation and ionization
GC-MS                         Gold standard for drug testing
MS/MS                         Detect 20 inborn errors of metabolism from a single blood spot
HPLC                          Most widely used liquid chromatography
                              Fractionation of drugs, hormones, lipids, carbohydrates and proteins
Hydrophilic gel               Gel filtration
                              Separation of enzymes, antibodies and proteins
                              Ex: Dextran and agarose
Hydrophobic gel               Gel permeation
                              Separation of triglyceride and fatty acid
                              Ex: Sephadex
Ion exchange                  Separation depends on the sign and ionic charge density
chromatography
Partition chromatography      Based on relative solubility in an organic solvent (nonpolar) and an aqueous
                              solvent (polar)
Affinity chromatography       For lipoproteins, CHO and glycated hemoglobins
Adsorption                    Based on differences between the adsorption and desorption of solutes at the
chromatography                surfaces of a solid particle
Fluorometry/Molecular         Det. amt. of lt. emitted by a molecule after excitation by electromagnetic
Luminescence Spectro.         radiation
                              Lt. sources: Mercury arc and Xenon lamp (UV)
                              Lt. detector: Photomultiplier tubes
                              2 monochromators:
                              Primary filter – selects wavelength absorbed by the solution to be measured
                              Secondary filter – prevents incident light from striking the photodetector
                              Sensitivity: 1000x than spectro
Quenching                     Major disadvantage of fluorometry
                              pH and temperature changes, chemical contaminants, UVL changes

                                                                                            lec.mt 04 |Page | 4
Instrumentation
Borosilicate glasswares       For heating and sterilization
                              Ex: Pyrex and Kimax
Boron-free/Soft glasswares    High resistance to alkali
Corex (Corning)               Special alumina-silicate glass
                              Strengthened chemically than thermally
                              6x stronger than borosilicate
Vycor (Corning)               For high thermal, drastic heat and shock
                              Can be heated to 900OC
Flint glass                   Soda-lime glass + Calcium, Silicon, Sodium oxides
                              Easy to melt
                              For making disposable glasswares
TD: To deliver                Exact amount
TC: To contain                Does not disperse the exact volume
Blowout                       w/ etched rings on top of pipet
Self-draining                 w/ o etched rings
                              Drain by gravity
Transfer pipet                Volumetric: for non-viscous fluid; self-draining
                              Ostwald folin: for viscous fluid; w/ etched ring
                              Pasteur: w/o consideration of a specific volume
                              Automatic macro-/micropipets
Graduated or measuring        Serological: w/ graduations to the tip (blowout)
pipet                         Mohr: w/o graduations to the tip (self-draining)
                              Bacteriologic
                              Ball, Kolmer and Kahn
                              Micropipettes: <1 mL
Micropipettes                 TC pipets:
                              Sahli-Hellige pipet
                              Lang-Levy pipet
                              RBC and WBC pipets
                              Kirk and Overflow pipets
Air displacement pipet        Piston: suction
                              Disposable tip
Positive displacement pipet   Piston  barrel (like a hypodermic syringe)
Dispenser/Dilutor pipet       Liquid: common reservoir  dispense repeatedly
Distilled H2O                 Calibrating medium for TD pipettes
Mercury                       Calibrating medium for TC pipettes
Acid dichromate               Cleaning solution for glasswares
(H2SO4 + K2Cr2O4)
Continuous flow analyzer      Common reaction vessel
                              Air bubbles: separates and cleans
                              Glass coil: mix
                              Examples: “STS”
                              Simultaneous Multiple Analyzer (SMA)
                              Technicon Autoanalyzer II
                              SMAC
Centrifugal analyzer          Acceleration and deceleration of the rotor
                              Advantage: Batch analysis
                              Examples: “RICC”
                              Cobas-Bio (Roche)
                              IL Monarch
                              CentrifiChem
                                                                                  lec.mt 04 |Page | 5
RotoChem
Discrete Analyzer        Most popular
                         Req. vol: 2-6 μL
                         Uses positive-displacement pipets
                         Run multiple-tests-one-sample-at-a-time
                         Random access capability (STAT)
                         Examples:
                         Vitros
                         Dimension Dade
                         Beckman ASTRA System (4 & 8)
                         Hitachi
                         Bayer Advia
                         Roche Cobas Integra 800
                         Roche Analytics P Module
                         Automated Clinical Analyzer (ACA) Star (Dade)
                         Dupont ACA
                         Abbott ABA-100 Bichromatic Analyzer
                         ABA-200
                         VP Analyzer
                         American Monitor KDA
                         Olympus Demand
Thin-Film Analyzers      4 or 5 layers:
(Dry slide technology)   -Spreading layer
                         -Scavenger layer - Ascorbate Oxidase
                         -Reagent layer
                         -Indicator layer
                         -Support layer
                         Colored reaction  Reflectance spectrophotometry
                         Examples: “KV2(75)”
                         Kodak Ektachem
                         Vitros 750XRC
                         Vitros 550XRC
Carry over               Transport of quantity of analyte or rgt from one specimen rxn into another, and
                         contaminating a subsequent one
Batch testing            All samples loaded at the same time
                         Single test is conducted on each sample
Parallel testing         One specimen
                         More than one test is analyzed
Random access testing    Any sample
                         Any test
                         Any sequence
                         STAT
Sequential testing       Multiple tests analyzed one after another on a given specimen
Open reagent system      System other than manufacturer’s reagents can be utilized for measurement
Closed reagent system    The operator can only use the manufacturer’s reagents
                                         Patient Preparation
Exercise                 Increased: GU2FT C2L3A5P2
                         GH
                         Urea
                         Urinary protein (Proteinuria)
                         Fatty acid
                         Testosterone

                                                                                      lec.mt 04 |Page | 6
CPK (muscle)
                            Creatinine (muscle)
                            Lactate
                            LH
                            LD (muscle)
                            ACP
                            Aldolase (muscle)
                            AST
                            ALT
                            Ammonia
                            Pyruvate
                            Prolactin
                            Decreased:
                            Glucose
Fist clenching              Increased: “LPP”
                            Lactate
                            Potassium
                            Phosphate
Fasting                     8-16 hours:
                            Glucose
                            Lipids
                            Lipoproteins
                            Increased:
                            Bilirubin (48 hours)
                            Triglyceride (72 hours)
Basal state collection      Glucose
                            Cholesterol
                            Triglyceride
                            Electrolytes
Diet                        Increased: “GLUC2H”
                            Glucose
                            Lipids
                            Urea (High protein diet)
                            Caffeine: increases glucose
                            Catecholamines
                            5-HIAA (From Serotonin)
Turbidity/Lactescence       Triglyceride >400mg/dL
Icterisia                   Bilirubin: 25.2 mg/dL
Icteric samples             Interfere with: "TACGu”
                            Total Protein
                            Albumin
                            Cholesterol
                            Glucose
Upright/supine (lying)      Preferred position
position                    Patient should be seated/supine at least 20 mins before blood collection to
                            prevent hemodilution or hemoconcentration
Supine  Sitting/Standing   Vasoconstriction  Reduced plasma volume
                            Increased: “ECA”
                            Enzymes
                            Calcium
                            Albumin
Sitting  Supine            Hemoconcentration

                                                                                         lec.mt 04 |Page | 7
Increased: “P(u)BLIC”
                           Proteins
                           BUN
                           Lipids
                           Iron
                           Calcium
Standing  Supine          Hemodilution
                           Decreased: “TLC”
                           Triglycerides
                           Lipoproteins
                           Cholesterol
Prolonged standing         Increased: K+ (muscles)
Prolonged bedrest          Decreased: Albumin (Fluid retention)
Tourniquet                 Recommended: 1 minute application
Prolonged tourniquet app.  Hemoconcentration
                           Anaerobiosis
                           Increased: “C2LEA2K”
                           Calcium
                           Cholesterol
                           Lactate
                           Enzymes
                           Ammonia
                           Albumin
                           K+
Tobacco smoking (Nicotine) Increased: “TUNG2C3”
                           Triglycerides
                           Urea
                           Nonesterified fatty acid
                           Glucose
                           GH
                           Catecholamines
                           Cortisol
                           Cholesterol
Alcohol ingestion          Increased: “THUG”
                           Triglycerides
                           Hypoglycemia (chronic alcoholism)
                           Uric acid/Urates
                           GGT
Ammonia                    Increases by 100-200μg/L/cigar
Stress (anxiety)           Increased: “LAGIC”
                           Lactate
                           Albumin
                           Glucose
                           Insulin
                           Cholesterol
Drugs                      Medications affecting plasma volume can affect protein, BUN, iron, calcium
                           Hepatotoxic drugs: increased liver function enzymes
                           Diuretics: decreased sodium and potassium
Diurnal variation          "CA3PI2TG”
                           Cortisol
                           ACTH
                           ACP

                                                                                        lec.mt 04 |Page | 8
Aldosterone
                               Prolactin
                               Iron
                               Insulin
                               Thyroxine
                               GH
                                       Specimen Collection and Handling
Sleeping patients              Must be awakened before blood collection
Unconscious patients           Ask nurse or relative
                               Identification bracelet
Venipuncture                   Median Cubital (1st)  Cephalic (2nd)  Basilic (3rd)
Tourniquet                     Velcro or Seraket type
                               3-4 inches above the site
                               Not exceed 1 minute
Needle                         Bevel up
                               15-30O angle
                               Length: 1 or 1.5 inch (Butterfly needle: ½ to ¾ inch)
After blood collection         Cotton  site
                               Apply pressure for 3-5 minutes
BP cuff as tourniquet          Inflate to 60 mmHg
Benzalkonium chloride          Disinfectant for ethanol testing
(Zephiran)                     Dilution – 1:750
IV line on both arms           Discontinue IV for 2 minutes
                               Collect sample below the IV site
                               Initial sample (5mL)  discard
IV fluid contamination         Increased:
                               Glucose (10% contam. w/ 5% dextrose  increased bld glucose by 500 mg/dL)
                               Chloride
                               Potassium
                               Sodium
                               Decreased:
                               Urea
                               Creatinine
Renin blood level              Collected after a 3-day diet, from a peripheral vein
Basal state collection         Early morning blood collection
                               12 hours after the last ingestion of food
Lancet                         1.75mm: preferred length to avoid penetrating the bone
Incision (Skin puncture)       <2.0mm (infants and children)
                               2-3mm (adults)
1.5-2.4mm                      Distance from the skin surface to bone or cartilage (middle finger)
Arterialized capillary blood   Earlobe: Preferred site
                               Lateral plantar heel surface: most commonly used site
Flea                           Minute metal filling which may be inserted into the capillary tube before
                               collecting blood to help mix the specimen while the blood is entering the tube
Indwelling umbilical artery    Best site for blood gas analysis (newborns)
1000-3000 RCF for 10 mins      Centrifugation requirement
Hemolysis                      Increased:
                               “KLA6MP ITC2”
                               -K+
                               -LDH (150x)
                               -ACP
                               -ALP
                                                                                           lec.mt 04 |Page | 9
-Aldolase
                          -ALT
                          -AST
                          -Albumin
                          -Mg2+
                          -Phosphorus
                          -Iron
                          -Total protein
                          Affects bilirubin levels
                          Inhibits lipase
Refrigeration/Chilling    Required for: “ABCGLRP2”
(Low temp)                Ammonia
                          Blood gases
                          Catecholamines
                          Gastrin
                          Lactic acid
                          Renin
                          PTH
                          Pyruvate
                          Decreased:
                          LD 4 and 5
                          Increased:
                          ALP
Photosensitive analytes   Bilirubin
                          Beta-carotene
                          Folate
                          Porphyrins
                          Vitamins A and B6
Oxalate                   Insoluble salt
                          1-2 mg/mL blood
Citrate                   Non-ionized form
                          3.2-3.8 g/dL (1:9 ratio)
EDTA                      Chelation
                          1-2 mg/mL blood
                          Versene: disodium salt
                          Sequestrene: Dipotassium salt
Fluoride                  Weakly dissociated calcium component
                          2 mg/mL blood: anti-glycolytic
                          10 mg/mL blood: anticoagulant
Heparin                   A.k.a. Mucoitin polysulfuric acid
                          Universal anticoagulant
                          Antithrombin
                          0.2 mg/mL blood
Lithium heparin           For glucose, BUN, ionized calcium, electrolyte studies (K+: best) and creatinine
Orange top tube           Additive: Thrombin
Royal blue top tube       Additives:
                          None;
                          Na2EDTA
                          Sodium heparin
Brown top tube            Lead testing
Tan top tube              Lead testing
Black top tube            Additive: Buffered sodium citrate

                                                                                       lec.mt 04 |Page | 10
For ESR
Respinning gel tubes          Increases potassium
Thixotropic gel               Gel separator (SG: 1.04)
                              Serum: (SG: 1.03)
                              RBC: (SG: 1.05)
                                         Laboratory Mathematics
% w/v                         Grams of solute = % solution desired x total volume desired
                                                                 100
% v/v                         mL of solute = % solution desired x total volume desired
                                                               100
% w/w                         Grams of solute = % solution desired x grams of the total solution
                                                                   100
Molarity                      M=       _grams of solute_______
                                   GMW x volume of solution
Moles                         Mol = weight (grams)
                                        GMW
To prepare a molar solution   Grams of solute = Molarity x GMW of the solute x Volume (L) desired
To convert % w/v to           M = % w/v  10
Molarity                             GMW
Normality                     N = _Grams of solute_
                                  EW x volume (L)
Equivalent weight (EW)        EW = __MW___
                                    valence
To prepare a normal           Grams of solute = Normality x EW x Volume (L)
solution of solids

To convert % w/v to           N = w/v  10
Normality                           EW
Normality                     N = Molarity x Valence
Molarity                      M = Normality
                                   valence
Molality                      m = Grams of solute__
                                  MW x kg of solvent
Milliequivalents              mEq/L = mg/dL  10  valence
                                                MW
Millimoles                    mmol/L = mg/dL  10
                                             MW
Ratio                         Ratio = _Volume of solute_
                                      Volume of solvent
Dilution                      Dilution = __Volume of solute__
                                          Volume of solution
0.179                         Conversion factor for iron (mg/dL  μmol/L)
0.01                          Conversion factor for phospholipid (g/dL to g/L)
2.27                          Conversion factor for folate
Analytical reagent (AR)       For qualitative and quantitative analyses
grade                         For accuracy
                              Established by American Chemical Society (ACS)
                              Uses: Trace metal analysis and preparation of standard solutions
Ultrapure reagents            Additional purification steps
                              Ex: Spectrograde, nanograde, HPLC grade
                              Uses: Chromatography, atomic absorption, immunoassays
Chemically Pure (CP) or       Indicates that the impurity limitations are not stated
                                                                                         lec.mt 04 |Page | 11
Pure Grade                   Purity is delivered by meas. of melting point or boiling point
Technical/Commercial         In manufacturing
grade                        Never used in clin. lab. testing
United States                For human consumption
Pharmacopoeia (USP) and      Not applicable for lab. analysis
National Formulery (NF)      Purpose: For drug manufacturing
Preparation of reagent       Filtration (1st)  Distillation, Ion exchange, Reverse Osmosis
grade water
Type I Rgt Water             Min. interference
                             Max. water purity
                             Used immediately
                             For ultramicrochemical analyses, measurements of nanogram or subnanogram
                             concentrations, tissue or cell methods (microscopy) and preparation of
                             standard solutions
                             Uses: FEP, AAS, blood gases and pH, enzyme studies, electrolyte testing, HPLC,
                             trace metal and iron studies
Type II Rgt Water            For clinical laboratory use (hematology, microbiology, immunology, chemistry)
                             For prep. of rgts and QC materials
Type III                     For washing glasswares
                             For urinalysis, parasitology and histology
Distilled water              Purified to remove almost all organic materials
Deionized water              Free from mineral salts; removed by ion exchange processes
                             Organic material may still be present
Occupational Safety and      Req. manuf. to indicate lot no., physical or biological health hazard of the chem..
Health Act (OSHA)            rgts, and precautions for safe use and storage

College of American          Recommends that a lab. document culture growth, pH and specific water
Pathologists (CAP)           resistance on reagent grade water
Tests for water purity       Microbiological content
                             pH
                             Resistivity
                             Chemical oxygen demand
                             Ammonia
                             Ions
                             Metals
Detergent-contaminated       Alkaline pH
water
Hard water                  Contains calcium, iron and other dissolved elements
NCCLS                       Now: Clinical and Laboratory Standards Institute (CLSI)
Dilute solution             Relatively little solute
Concentrated solution       Large quantity of solute in solution
Saturated solution          Excess of undissolved solute particles
Super saturated solution    Greater concentration of undissolved solute particles than does a saturated
                            solution of the same substance
Primary standard            Highly purified
(IUPAC)                     Measured directly to produce a substance of exact known concentration
Secondary standard          Low purity
                            Concentration is determined by comparison w/ a primary standard
                                             Laboratory Safety
National Fire Protection Association (NFPA) Classification of Fires
Class A fire                Ordinary combustibles: paper, cloth, rubbish, plastics, wood
                            Extinguisher: Water (A), Dry chemical (ABC), loaded steam
                                                                                            lec.mt 04 |Page | 12
Class B fire               Flammable liquids: grease, gasoline, paints, oil
                           Extinguisher: Dry chemical (ABC), carbon dioxide (BC), halon foam (BC)
Class C fire               Electrical equipment and motor switches
                           Extinguisher: Dry chemical (ABC), Carbon dioxide (BC), halon (BC)
Class D fire               Flammable metals: mercury, magnesium, sodium, lithium
                           Extinguisher: Metal X
                           Fought be fire fighters only
Class E fire               Detonation (Arsenal fire)
                           Allowed to burn out and nearby materials protected
Standard Hazards Identification System (Diamond-shaped color coded symbol)
Blue quadrant              Health hazard
Red quadrant               Flammable hazard
Yellow quadrant            Reactivity/Stability hazard
White quadrant             Other special information
Chemical spills            1st step: assist/evacuate personnel
1:10 dilution of chlorine  To disinfect and clean bench tops
bleach (10%)               In contact with the area for at least 20 minutes
                           HBV: 10 minutes
                           HIV: 2 minutes
Poisonous vapors           Chloroform
                           Methanol
                           Carbon tetrachloride
                           Bromide
                           Ammonia
                           Formaldehyde
                           Mercury
Flammable and              Acetone
combustible solvents       Ethanol
                           Toluene
                           Methanol
                           Xylene
                           Benzene
                           Isopropanol
                           Heptane
Flammable liquids          Flash point below 37.8OC
Combustible liquids        Flash point at or above 37.8OC
Strong acids or bases      Neutralized before disposal
                           Water should NEVER be added to concentrated acid
Ether                      Deteriorate over time  hazardous
                           Forms explosive peroxides
Benzidine                  Known carcinogen
Fumehoods                  Ventilation: velocity of 100-120 ft/min
Safety showers             Deliver 30-50 gal/min of H2O at 20-50 psi
                                             Carbohydrates
Glycol aldehyde            The simplest carbohydrate
Sucrose                    Most common nunreducing sugar
Pancreas                   Exocrine: Enzymes (AMS, LPS)
                           Endocrine: Hormones (Insulin, glucagon, somatostatin)
Hyperglycemic Hormones     “GAG CHET”
                           Glucagon
                           ACTH
                           GH
                                                                                     lec.mt 04 |Page | 13
Cortisol
                             Human Placental Lactogen
                             Epinephrine
                             Thyroxine
Hyperglycemia                Electrolyte Imbalance:
(≥126 mg/dL)                 Decreased: Sodium, Bicarbonate
                             Increased: Potassium
Hypoglycemia                 50-55 mg/dL = Symptoms
                             ≤50 mg/dL = Diagnostic
Whipple’s triad              Low blood glucose concentration
(Hypoglycemia)               Typical symptoms
                             Symptoms alleviated by glucose administration
6:1                          Ratio of BHA to AA in severe DM
                             (Normal = 1:1)
Type 1 DM                    IDDM
                             Juvenile Onset
                             Brittle
                             Ketosis-prone
                             80-90% reduction of beta-cells  Symptomatic Type 1 DM
                             HLA-DR3 and DR4
                             (+) Glutamic acid decarboxylase (GAD65)
                             (+) Insulin autoantibodies
                             (+) Microalbuminuria: 50-200 mg/24 hours = Diabetic nephropathy
                             (-) C-peptide
Complications of Type I DM   Microvascular disorders:
                             Nephropathy
                             Neuropathy
                             Retinopathy
Type 2                       NIDDM
                             Adult type/Maturity Onset
                             Stable
                             Ketosis-resistant
                             Receptor-deficient
                             Insulin resistance: relative insulin deficiency
                             Strong genetic predisposition
                             Geneticist’s nightmare
                             If untreated  glucose: >500 mg/dL  nonketotic hyperosmolar coma
Gestational DM               Screening: 1hr GCT (50g) – bet. 24 and 28 weeks of gestation
                             Confirmatory: 3-hr GTT (100g)
                             Infants: at risk for respiratory distress syndrome, hypocalcemia,
                             hyperbilirubinemia
                             After giving birth, evaluate 6-12 weeks postpartum
                             Converts to DM w/in 10 years in 30-40% of cases
OGTT (GDM)                   FBS = ≥95 mg/dL
                             1-Hr = ≥ 180 mg/dL
                             2-Hr = ≥ 155 mg/dL
                             3-Hr = ≥ 140 mg/dL
                             GDM = 2 plasma values of the above glucose levels are exceeded
Impaired fasting glucose     FBS = 100-125 mg/dL
(Pre-diabetes)
Impaired glucose tolerance   FBS = <126 mg/dL
                             2-Hr OGTT = 140-199 mg/dL

                                                                                    lec.mt 04 |Page | 14
FBS                         WB = 15% lower than in serum or plasma
                            VB = 7 mg/dL lower than capillary and arterial blood
CSF glucose                 60-70% of the plasma glucose
Peritoneal fluid glucose    Same with plasma glucose
Plasma glucose increases    Fasting: 2 mg/dL/decade
w/ age                      Postprandial: 4 mg/dL/decade
                            Glucose challenge: 8-13 mg/dL/decade
w/in 1 hour                 Separate serum/plasma from the cells
(Preferably w/in 30 mins)
5-7%/hr                     Glycolysis at room temperature
1-2 mg%/hr                  Glycolysis at refrigerated temperature
Copper reduction methods    Cupric  Cuprous  Cuprous oxide
Folin Wu                    Cuprous ions + phosphomolybdate  phosphomolybdenum blue
Nelson-Somogyi              Cuprous ions + arsenomolybdate  arsenomolybdenum blue
Neocuproine method          Cuprous ions + neocuproine  Cuprous-neocuproine complex (yellow)
Benedict’s method           Reducing substances in blood and urine
Alkaline Ferric Reduction   Ferricyanide ---(Glucose)--> Ferrocyanide
method (Hagedorn-Jensen)      (Yellow)                    (Colorless)
Ortho-toluidine             Schiff’s base
(Dubowski method)
Glucose oxidase             Measures beta-D-glucose (65%)
Mutarotase                  Converts alpha-D-glucose (35%) to beta-D-glucose (65%)
NADH/NADPH                  Absorbance at 340nm
Polarographic glucose       Consumption of oxygen on an oxygen-sensing electrode
oxidase                     O2 consumption α glucose concentration
Hexokinase method           Most specific method
                            Reference method
                            Uses G-6-PD
G-6-PD                      Most specific enzyme rgt for glucose testing
Interfering substances      False-decreased
(Glucose oxidase)           Bilirubin
                            Uric acid
                            Ascorbate
Hemolysis (>0.5 g/dL Hgb)   Major interfering substance in hexokinase method (false-decreased)
Dextrostics                 Cellular strip
                            Strip w/ glucose oxidase, peroxidase and chromogen
OGTT                        Janney-Isaacson method (Single dose) = most common
                            Exton Rose (Double dose)
                            Drink the glucose load within 5 mins
IVGTT                       For patients with gastrointestinal disorders (malabsorption)
                            Glucose: 0.5 g/kg body weight
                            Given w/in 3 mins
                            1st blood collection: after 5 mins of IV glucose
Requirements for OGTT       Ambulatory
                            Fasting: 8-14 hours
                            Unrestricted diet of 150g CHO/day for 3 days
                            Do not smoke or drink alcohol
Glucose load                75 g = adult (WHO std)
                            100 g = pregnant
                            1.75 g glucose/kg BW = children
HbA1c                       2-3 months
                            Glucose = beta-chain of HbA1
                                                                                      lec.mt 04 |Page | 15
1% increase in HbA1c = 35 mg/dL increase in plasma glucose
                             18-20% = prolonged hyperglycemia
                             7% = cutoff
                             Specimen: EDTA whole blood
                             Test: Affinity chromatography (preferred)
IDA and older RBCs           High HbA1c
RBC lifespan disorders       Low HbA1c
Fructosamine                 2-3 weeks
(Glycosylated albumin/       Useful for patients w/ hemolytic anemias and Hgb variants
plasma protein ketoamine)    Not used in cases of low albumin
                             Specimen: Serum
Galactosemia                 Congenital deficiency of 1 of 3 enzymes in galactose metabolism
                             Galactose-1-phosphate uridyl transferase (most common)
                             Galactokinase
                             Uridine diphosphate galactose-4-epimerase
Essential fructosuria        Autosomal recessive
                             Fructokinase deficiency
Hereditary fructose          Defective fructose-1,6-biphosphate aldolase B activity
intolerance
Fructose-1,6-biphosphate     Failure of hepatic glucose generation by gluconeogenic precursors such as
deficiency                   lactate and glycerol
Glycogen Storage Disease     Autosomal recessive
                             Defective glycogen metabolism
                             Test: IVGTT (Type I GSD)
Ia = Von Gierke              Glucose-6-Phosphatase deficiency (most common worldwide)
II = Pompe                   Alpha-1,4-glucosidase deficiency (most common in the Philippines)
III = Cori Forbes            Debrancher enzyme deficiency
IV = Andersen                Brancher enzyme deficiency
V = McArdle                  Muscle phosphorylase deficiency
VI = Hers                    Liver phosphorylase deficiency
VII = Tarui                  Phosphofructokinase deficiency
XII = Fanconi-Bickel         Glucose transporter 2 deficiency
CSF glucose                  Collect blood glucose at least 60 mins (to 2 hrs) before the lumbar puncture
                             (Because of the lag in CSF glucose equilibrium time)
< 0.5                        Normal CSF : serum glucose ratio
C-peptide                    Formed during conversion of pro-insulin to insulin
5:1 to 15:1                  Normal C-peptide : insulin ratio
D-xylose absorption test     Differentiate pancreatic insufficiency from malabsorption (low blood or urine
                             xylose)
Gerhardt’s ferric chloride   Acetoacetate
test
Nitroprusside test           10x more sensitive to acetoacetate than to acetone
Acetest tablets              Acetoacetate and acetone
Ketostix                     Detects acetoacetate better than acetone
KetoSite assay               Detects beta-hydroxybutyrate but not widely used
Normal Values                RBS = <140 mg/dL
(Carbohydrates)              FBS = 70-100 mg/dL
                             HbA1c = 3-6%
                             Fructosamine = 205-285 μmol/L
                             2-Hr PPBS = <140 mg/dL
                             GTT:
                             30 mins = 30-60 mg/dL above fasting
                                                                                        lec.mt 04 |Page | 16
1-Hr = 20-50 mg/dL above fasting
                               2-Hr = 5-15 mg/dL above fasting
                               3-Hr = fasting level or below
                                                     Lipids
Phospholipids                  Most abundant lipid
                               Amphipathic: polar (hydrophilic head) and nonpolar (hydrophobic side chain)
Sphingomyelin                  Reference material during 3rd trimester of pregnancy
                               Concentration is constant as opposed to lecithin
                               Not derived from glycerol but from sphingosine (amino alcohol)
Forms of phospholipids         70% Lecithin/Phosphatidyl choline
                               20% Sphingomyelin
                               10% Cephalin
TLC + Densitometric            Method for L/S ratio
quantitation
Microviscosity                 Measured by fluorescence polarization
Cholesterol                    Not a source of fuel
                               Not affected by fasting
                               70% Cholesterol ester (plasma/serum)
                               30% Free cholesterol (plasma/serum and RBC)
LCAT                           Esterification of cholesterol
Apo A-1                        Activator of LCAT
Cholesterol increases after    2 mg/dL/year between 50 and 60 years old
the age of 50
Liebermann Burchardt           Cholestadienyl Monosulfonic acid
                               Green end color
Salkowski                      Cholestadienyl Disulfonic acid
                               Red end color
Color developer mixture        Glacial acetic acid
(Cholesterol)                  Acetic anhydride
                               Conc. H2SO4
One-step method                Colorimetry (Pearson, Stern and Mac Gavack)
Two-step method                Color. + Extraction (Bloor’s)
Three-step method              Color. + Extract. + Saponification (Abell-Kendall)
Four-step method               Color. +Extract. + Sapon. + Precipitation
                               (Schaenheimer Sperry, Parekh and Jung)
Abell, Levy and Brodie mtd     CDC reference method for cholesterol:
(Chemical method)              -Hydrolysis/saponification (Alc. KOH)
                               -Hexane extraction
                               -Colorimetry (Liebermann-Burchardt)
Triglycerides                  Most insoluble lipid
                               Main storage lipid in man (adipose tissue) – 95%
                               Fasting: 12 hours
Triglyceride increases after   2 mg/dL/year between 50 and 60 years old
the age of 50
Van Handel & Zilversmith       Chromotropic acid
(Colorimetric)                 (+) Blue color compound
Hantzsch Condensation          Diacetyl acetone
(Fluorometric)                 (+) Diacetyl lutidine compound
Modified Van Handel and        CDC reference method for triglycerides:
Zilversmith                    -Alkaline hydrolysis
(Chemical method)              -Chloroform extraction  extract treated w/ silicic acid
                               -Color reaction w/ chromotropic acid – meas. HCHO
                                                                                          lec.mt 04 |Page | 17
(+) Pink colored
Fatty acids                 Short chain = 4-6 C atoms
                            Medium chain = 8-12 C atoms
                            Long chain = >12 C atoms
                            Saturated = w/o double bonds
                            Unsaturated = w/ double bonds
                            Substrate for gluconeogenesis
                            Most is bound to albumin
Palmitic acid               16:0
Stearic acid                18:0
Oleic acid                  18:1
Linoleic acid               18:2
Arachidonic acid            20:4
Lipoprotein lipase          Hydrolyzes TAG in lipoproteins, releasing fatty acid and glycerol
(Lipemia clearing factor)
Hepatic lipase              Hydrolyzes TAG and phospholipids from HDL
                            Hydrolyzes lipids on VLDL and IDL
Endothelial lipase          Hydrolyzes phospholipids and TAG in HDL
Apolipoprotein              Protein component of lipoprotein
                            Amphipathic helix – ability of proteins to bind to lipids
Chylomicrons                Largest and least dense
                            Produced by the intestine
                            SG: <0.95
                            80-95% TAG (exogenous)
                            Apo B-48 (Major)
                            EP: Origin
VLDL                        Secreted by the liver
                            SG: 0.95-1.006
                            65% TAG (endogenous)
                            Apo B-100 (Major)
                            EP: pre-beta
LDL                         Synthesized by the liver
                            SG: 1.006-1.063
                            50% CE
                            Apo B-100 (Major)
                            EP: beta
                            Cholesterol transport: LiverTissues
                            Target of cholesterol lowering therapy
                            Better marker for CHD risk
HDL                         Smallest but dense
                            SG: 1.063-1.21
                            45-55% protein
                            26-32% phospholipid
                            Apo A-1 (Major)
                            EP: alpha
                            Produced by the liver and intestine
                            Reverse cholesterol transport: TissueLiver
IDL                         Product of VLDL catabolism
                            Seen in Type 3 hyperlipoproteinemia (Apo E-III def.; beta-VLDL)
                            SG: 1.006-1.019
Lp(a)                       Sinking pre-beta lipoprotein
                            SG: 1.045-1.080

                                                                                        lec.mt 04 |Page | 18
Apo B-100
                            EP: pre-beta (VLDL)
                            UC: like LDL
                            Independent risk factor for atherosclerosis
LpX                         Found in obstructive jaundice (cholestasis) and LCAT deficiency
                            90% FC and PL
                            Apo C and albumin
Beta-VLDL                   Floating beta-lipoprotein
                            SG: <1.006
                            EP: beta (LDL)
                            UC: like VLDL
                            Found in type 3 hyperlipoproteinemia (Apo E-III def; IDL)
                            Rich in cholesterol content than VLDL
Lipoprotein methodologies   Specimen: sample from serum separator tubes (preferred)
                            EDTA plasma: choice for research studies of LPP fractions
                            Fasting state: TAG  VLDL
                            Nonfasting state: TAG  CM
Ultracentrifugation         Reference method for LPP quantitation
                            Reagent: Potassium bromide (SG: 1.063)
                            Ultracentrifugation of plasma for 24 hours
                            Expressed in Svedberg units
Electrophoresis             Electrophoretic pattern:
                            (+) HDL VLDL  LDL  CM (Origin) (-)
                            Agarose gel: sensitive medium
                            VLDL: migrates w/ alpha2-globulin (pre-beta)
Chemical precipitation      Uses polyanions (heparin and divalent cations) and polyethylene glycol
                            Dextran sulfate-Mg2+
                            Heparin-Mn2+
3-step procedure:           CDC Reference method for HDL
Ultracentrifugation
Precipitation
Abell-Kendall assay
Beta quantification +       Method for LDL
Ultracentrifugation +       Sample: EDTA plasma
Chemical precipitation
Immunoturbidimetric assay   Measures Lipoprotein (a)
LDL Cholesterol             Total Cholesterol – HDL – VLDL
Friedewald method           Most commonly used
                            VLDL = TAG/2.175 (mmol/L)
                            VLDL = TAG/5 (mg/dL)
                            Not applicable if TAG is >400 mg/dL
De Long method              VLDL = TAG/2.825 (mmol/L)
                            VDL = TAG/6.5 (mg/dL)
Apo A-1                     Activates LCAT
Apo B-100                   LDL  LDL receptor
Apo B-48                    CM (major)
                            Not recognized by LDL receptor
Apo C-II                    Activates LPL
Apo D                       Activates LCAT
Apo E                       Apo E-4: associated w/ high LDL, higher risk of CHD and Alzheimer’s disease
Apo(a)                      Lp(a)
                            Homologous to plasminogen
                                                                                       lec.mt 04 |Page | 19
Abetalipoproteinemia         Autosomal recessive
(Basses-Kornzweig syn.)      Defective apo B synthesis
                             Deficient fat soluble vitamins
Niemann-Pick disease         Sphingomyelinase deficiency
Tangier’s disease            Deficiency of HDL (1-2 mg/dL)
                             Defects in the gene for the ABCA1 transporter
LPL deficiency               TAG = 10,000 mg/dL
(Chylomicronemia)            Do not develop premature coronary disease (CM are not atherogenic)
                             Abdominal pain and pancreatitis
LCAT deficiency              Fish-eye disease
                             Low HDL
Tay-Sachs disease            Hexosaminidase A deficiency
Fredrickson Classification
Type 1                       LPL deficiency (Chylomicronemia)
                             Increased: CM (TAG)
Type 2a                      Familial hypercholesterolemia
                             Increased: LDL (cholesterol)
Type 2b                      Combined hyperlipidemia (most common primary hyperlipidemia)
                             Increased: LDL (cholesterol), VLDL (TAG)
Type 3                       Dysbetalipoproteinemia
                             Increased: IDL, (+) beta-VLDL
                             (+) Apo E-II
                             (+) Eruptive and palmar xanthomas
Type 4                       Hypertriglyceridemia
                             Increased: VLDL (TAG)
Type 5                       Increased: VLDL (Endo.TAG), CM (Exo.TAG)
Normal Values                Cholesterol:
(Lipids)                     Desirable = <200 mg/dL
                             Borderline high = 200-239 mg/dL
                             High = >240 mg/dL
                             Triglycerides:
                             Desirable = <150 mg/dL
                             Borderline high = 150-199 mg/dL
                             High = 200-499
                             Very high = >500 mg/dL
                             HDL:
                             Low = <40 mg/dL (Cutoff)
                             High = >60 mg/dL
                             LDL:
                             Optimal = <100 mg/dL
                             Near/above optimal = 100-129 mg/dL
                             Borderline high = 130-159 mg/dL
                             High = 160-189 mg/dL
                             Very high = >190 mg/dL
                                                  Proteins
Proteis                      First rank of importance
Proteins                     Amphoteric: positive and negative charges
                             Effective blood buffers
                             Synthesized by the liver except immunoglobulins (plasma cells)
                             Provide 12-20% of total daily body energy requirement
                             Composed of 50-70% of the cell’s dry weight


                                                                                      lec.mt 04 |Page | 20
Primary structure            Amino acid sequence
                             Det. the identity of protein, molecular structure, function binding capacity,
                             recognition ability
Secondary structure          Winding of polypeptide chain
                             Specific 3-D conformations: alpha-helix, beta-pleated sheath, bend form
Tertiary structure           Actual 3-D configuration
                             Folding pattern
                             Physical and chemical properties of proteins
Quarternary structure        Association of 2 or more polypeptide chains  protein
Albumin                      No quarternary structure
Glucogenic amino acids       Alanine (pyruvate)
                             Arginine (alpha-ketoglutarate)
                             Aspartate (oxaloacetate)
Ketogenic amino acids        Degraded to acetyl-CoA
                             Leucine
                             Lysine
Simple proteins              Hydrolysis  Amino acids
                             Fibrous: fibrinogen, troponins, collagen
                             Globular: hemoglobin, plasma proteins, enzymes, peptide hormones
Conjugated proteins          Protein (apoprotein) + nonprotein moiety (prosthetic group)
                             Metalloproteins: ferritin, ceruloplasmin, hemoglobin, flavoproteins
                             Lipoproteins: VLDL, HDL, LDL, CM
                             Glycoproteins: haptoglobin, alpha1-antitrypsin (10-40% CHO)
                             Mucoproteins or proteoglycans: Mucin (CHO > CHON)
                             Nucleoproteins: Chromatin (combined w/ nucleic acids)
Nitrogen balance             Balance bet. anabolism and catabolism
Negative nitrogen balance    Catabolism > anabolism
                             Excessive tissue destruction
Positive nitrogen balance    Anabolism > catabolism
                             Growth and repair processes
Prealbumin (Transthyretin)   Transports thyroxine and retinol (Vit. A)
                             Landmark to confirm that the specimen is really CSF
Albumin                      Maintains osmotic pressure
                             Negative acute phase reactant
Alpha1-antitrypsin           Acute phase reactant
                             Major inhibitor of protease activity
                             90% of alpha1-globulin band
Alpha1-fetoprotein           Gestational marker
                             Tumor marker: hepatic and gonodal cancers
                             Screening test for fetal conditions (Spx: maternal serum)
                             Amniotic fluid: confirmatory test
                             Increased: Hepatoma, spina bifida, neural tube defects
                             Decreased: Down Syndrome (Trisomy 21)
Alpha1-acid glycoprotein/    Low pI (2.7)
orosomucoid                  Negatively charged even in acid solution
Alpha1-antichymotrypsin      Acute phase reactant
                             Binds and inactivates PSA
                             Increased: Alzheimer’s disease, AMI, infection, malignancy, burns
Haptoglobin (alpha2)         Acute phase reactant
                             Binds free hemoglobin (alpha chain)
Ceruloplasmin (alpha2)       Copper binding (6-8 atoms of copper are attached to it)
                             Has enzymatic activities
                                                                                           lec.mt 04 |Page | 21
Decreased: Wilson’s disease (copper  skin, liver, brain, cornea [Kayser-
                             Fleisher rings])
Alpha2-macroglobulin         Larges major nonimmunoglobulin protein
                             Increased: Nephrotic syndrome (10x)
                             Forms a complex w/ PSA
Group-specific component     Affinity w/ vitamin D and actin
(Gc)-globulin (bet. alpha1
and alpha2)
Hemopexin (beta)             Binds free heme
Beta2-microglobulin          HLA
                             Filtered by glomeruli but reabsorbed
Transferrin/Siderophilin     Negative acute phase reactant
(beta)                       Major component of beta2-globulin fraction
                             Pseudoparaproteinemia in severe IDA
                             Increased: Hemochromatosis (bronze-skin), IDA
Complement (beta)            C3: major
Fibrinogen (bet. beta and    Acute phase reactant
gamma)                       Between beta and gamma globulins
CRP (gamma)                  General scavenger molecule
                             Undetectable in healthy individuals
                             hsCRP: warning test to persons at risk of CAD
Immunoglobulins (gamma)      Synthesized by the plasma cells
                             IgG>IgA>IgM>IgD>IgE
Myoglobin                    Marker: Ischemic muscle cells, chest pain (angina), AMI
Troponins                    Most important marker for AMI
TnT (Tropomyosin-binding     Specific for heart muscle
subunit)                     Det. unstable angina (angina at rest)
TnI (Inhibitory subunit or   Only found in the myocardium
Actin-binding unit)          Greater cardiac specificity than TnT
                             Highly specific for AMI
                             13x more abundant in the myocardium than CK-MB
                             Very sensitive indicator of even minor amount of cardiac necrosis
TnC                          Binds calcium ions and regulate muscle contractions
Glomerular proteinuria       Most common and serious type
                             Often called albuminuria
Tubular proteinuria          Defective reabsorption
                             Slightly increased albumin excretion
Overload proteinuria         Hemoglobinuria
                             Myoglobinuria
                             Bence-Jones proteinuria
Postrenal proteinuria        Urinary tract infection, bleeding, malignancy
Microalbuminuria             Type 1 DM
                             Albumin excretion ≥30 mg/g creatinine (cutoff: DM) but ≤300 mg/g creatinine
                             Microalbuminuria: 2 out of 3 specimens submitted are w/ abnormal findings
                             (w/in 6 months)
CSF Oligoclonal banding      2 or more IgG bands in the gamma region:
                             Multiple sclerosis
                             Encephalitis
                             Neurosyphilis
                             Guillain-Barre syndrome
                             Neoplastic disorders


                                                                                         lec.mt 04 |Page | 22
Serum Oligoclonal banding    Leukemia
                             Lymphoma
                             Viral infections
Alkaptonuria                 Ochronosis (tissue pigmentation)
Homocystinuria               Impaired activity of cystathione beta-synthetase
                             Elevated homocysteine and methionine in blood and urine
                             Screen: Modified Guthrie test (Antagonist: L-methionine sulfoximine)
MSUD                         Markedly reduced or absence of alpha-ketoacid decarboxylase
                             4 mg/dL of leucine is indicative of MSUD
                             Screen: Modified Guthrie test (Antagonist: 4-azaleucine)
                             Diagnostic: Amino acid analysis (HPLC)
PKU                          Deficiency of tetrahydrobiopterin (BH4)  elevated blood phenylalanine
Normal Values                Total protein = 6.5-8.3 g/dL
(Proteins)                   Albumin = 3.5-5.0 g/dL
                             Globulin = 2.3-3.5 g/dL
                                           Kidney Function Tests
Tests for GFR                Clearance:
                             -Inulin clearance
                             -Creatinine clearance
                             -Urea clearance
                             Phenolsulfonphthalein dye test
                             Cystatin C
Tests for Renal Blood Flow   BUN
                             Creatinine
                             Uric acid
Tests Measuring Tubular      Excretion:
Function                     -Para-amino hippurate test (Diodrast test)
                             -Phenolsulfonphthalein dye test
                             Concentration:
                             -Specific gravity
                             -Osmolality
GFR                          Decreases by 1.0 mL/min/year after age 20-30 years
                             150 L of glomerular filtrate is produced daily
Inulin clearance             Reference method
Creatinine clearance         Best alternative method
                             Measure of the completeness of a 24-hour urine collection
                             Excretion: 1.2-1.5 g creatinine/day
Urea clearance               Demonstrate progression of renal disease or response to therapy
Cystatin C                   Low MW protease inhibitor
                             FilteredNot secretedCompletely reabsorbed (PCT)
                             Indirect estimates of GFR
                             Its presence in urine denotes damage to PCT
BUN                          Synthesized from Ornithine or Kreb’s Henseleit cycle
                             First metabolite to elevate in kidney diseases
                             Better indicator of nitrogen intake and state of hydration
2.14                         BUN  Urea (mg/dL)
Fluoride or citrate          Inhibit urease
Thiosemicarbazide            Enhance color development (BUN mtd)
Ferric ions
Diacetyl monoxime method     Yellow diazine derivative
Urease method                Routinely used
                             Urease: prepared from jack beans
                                                                                      lec.mt 04 |Page | 23
Urea ---(Urease)--> NH4 + Berthelot reagent (Measure ammonia)
Coupled urease                 Glutamate dehydrogenase method
                               UV enzymatic method
Isotope dilution mass          Reference method
spectrometry                   For research purposes
NPN                            45% Urea
                               20% Amino acid
                               20% Uric acid
                               5% Creatinine
                               1-2% Creatine
                               0.2% Ammonia
Creatinine                     Derived from alpha-methyl guanidoacetic acid (creatine)
                               Produced by 3 amino acids (methionine, arginine, lysine)
                               Most commonly used to monitor renal function
Enzymatic methods              Creatinine Aminohydrolase – CK method
(Creatinine)                   Creatinase-Hydrogen Peroxide method – benzoquinonemine dye (red)
                               Creatininase (a.k.a. creatinine aminohydrolase)
Direct Jaffe method            Formation of red tautomer of creatinine picrate
Interferences (Direct Jaffe)   Falsely increased:
                               Ascorbate
                               Glucose
                               Uric acid
                               Alpha-keto acids
Folin Wu Method                (+) Red orange tautomer
Lloyd’s or Fuller’s Earth      True measure of creatinine
method                         Sensitive and specific
                               Uses adsorbent to remove interferences (UA, Hgb, Bili)
Lloyd’s reagent                Sodium aluminum silicate
Fuller’s earth reagent         Aluminum magnesium silicate
Jaffe reagent (Alk. picrate)   Satd. picric acid + 10% NaOH
Kinetic Jaffe method           Popular, inexpensive, rapid and easy to perform
                               Requires automated equipment
Azotemia                       Elevated urea and creatinine in blood
Pre-renal azotemia             Decreased GFR but normal renal function
                               Dehydration, shock, CHF
                               Increased: BUN
                               Normal: Creatinine
Renal azotemia                 True renal disease
                               Decreased GFR
                               Striking BUN level but slowly rising creatinine value
                               BUN = >100 mg/dL
                               Creatinine = >20 mg/dL
                               Uric acid = >12 mg/dL
Post renal azotemia            Urinary tract obstruction
                               Decreased GFR
                               Nephrolithiasis, cancer or tumors of GUT
                               Creatinine = normal or slightly increased
Uremia                         Marked elevation of urea, accompanied by acidemia and electrolyte imbalance
                               (K+ elevation) of renal failure
                               Normocytic, normochromic anemia
                               Uremic frost (dirty skin)
                               Edema

                                                                                        lec.mt 04 |Page | 24
Foul breath
                            Urine-like sweat
Uric acid                   From purine (adenine and guanine) catabolism
                            Excretion: 1g/day
Hyperuricemia               -Gout
                            -Increased nuclear metabolism (leukemia, lymphoma, MM, polycythemia,
                            hemolytic and megaloblastic anemia) – Tx: Allopurinol
                            -Chronic renal disease
                            -Lesch-Nyhan syndrome (HGPRT deficiency)
Hypouricemia                Fanconi’s syndrome
                            Wilson’s disease
                            Hodgkin’s disease
Methods (Uric acid)         Stable for 3 days
                            Potassium oxalate cannot be used
                            Major interferences: Ascorbate and bilirubin
Phosphotungstic acid mtd    Uric acid + Phosphotungstic acid ---(NaCN/NaCO3)--> Tungsten blue + Allantoin
NaCN                        Folin
                            Newton
                            Brown
                            Benedict
NaCO3                       Archibald
                            Henry
                            Caraway
Lagphase                    Incubation period after the addition of an alkali to inactivate non-uric acid
                            reactants
Uricase method              Simplest and most specific method
                            Candidate reference method
                            Uric acid (Absorbance at 293nm) ---[Uricase]--> Allantoin (No absorbance)
                            Decrease in absorbance α uric acid concentration
Para-amino hippurate test   Measures renal plasma flow
                            Reference method for tubular function
Phenolsulfonphthalein dye   Measures excretion of dye proportional to renal tubular mass
test                        6 mg of PSP is administered IV
Concentration tests         Collecting tubules and loops of Henle
                            Specimen: 1st morning urine
Specific gravity            Affected by solute number and mass
                            SG >1.050: X-ray dye and mannitol
                            1.010 = SG of ultrafiltrate in Bowman’s space
Osmolality                  Total number solute particles present/kg of solvent (moles/kg solvent)
                            Affectted only by number of solutes present
                            Urine osmolality = due to urea
                            Serum osmolality = due to sodium and chloride
                            Det. by Colligative properties:
                            Freezing point (incr. osm. = decr. FP)
                            Vapor pressure (incr. osm. = decr. VP)
                            Osmotic pressure (incr. osm. = incr. OP)
                            Boiling point (incr. osm. = incr. BP)
Direct methods              Freezing point osmometry = popular method
(Osmolality)                Vapor pressure osmometry (Seebeck effect)
Incr. plasma osmolality     Incr. vasopressin (H2O reabsorption)  decr. plasma osmolality
Tubular failure             Increased: BUN, creatinine, calcium
                            Decreased: Phosphate

                                                                                      lec.mt 04 |Page | 25
Osmolal gap                  Difference between measured and calculated osmolality
                             Sensitive indicator of alcohol or drug overdose
Osmolal gap: >12 mOsm/kg     DKA
                             Drug overdose
                             Renal failure
Normal Values                Creatinine Clearance:
(Kidney Function Tests)      Male = 85-125 mL/min
                             Female = 75-112 mL/min
                             BUN = 8-23 mg/dL
                             Creatinine = 0.5-1.5 mg/dL
                             Uric acid:
                             Male = 3.5-7.2 mg/dL
                             Female = 2.6-6.0 mg/dL
                             Renal plasma flow (PAH) = 600-700 mL/min
                             Renal blood flow (PSP) = 1200 mL/min
                             SG = 1.005-1.030
                             Osmolality:
                             Serum = 275-295 mOsm/kg
                             Urine (24-hr) = 300-900 mOsm/kg
                             [<290 mOsm/kg = kidney damage]
                             Urine osmolality: Serum osmolality = 1:1 to 3:1
                             [>1:1 = Glomerular disease]
                             [1.2:1 = loss of renal concentrating ability]
                             [<1:1 = Diabetes Insipidus]
                                             Liver Function Tests
Liver                        Receives 15 mL of blood per minute
                             Lobule: anatomic unit
Synthetic function           Proteins, CHO, lipids, LPP, clotting factors, ketone bodies, enzymes
                             Albumin: 12g/day
Conjugation function         Bilirubin metabolism
                             Bilirubin: 200mg/day
Detoxification and Drug      Drugs
metabolism                   Ammonia  Urea  Excreted
Excretory and Secretory      Bile acids: cholic acid and chenodeoxycholic acid
functions                    Bile salts: bile acids + amino acids (glycine and taurine)
Storage function             Vitamins
                             Glycogen
Test measuring the Hepatic   Total Protein Determination:
Synthetic Ability            -Kjeldahl method
                             -Biuret method
                             -Folin-Ciocalteu (Lowry) method
                             -UV absorption method
                             -Electrophoresis
                             -Refractometry
                             -Turbidimetric and Nephelometric methods
                             -Salt fractionation
                             Prothrombin Time (Vitamin K Response Test)
Test measuring               Bilirubin Assay:
Conjugation/Excretion        -Evelyn and Malloy method
Function                     -Jendrassik and Grof
                             Bromsulfonphthalein (BSP) Dye Excretion test


                                                                                          lec.mt 04 |Page | 26
Test for Detoxification       Enzyme tests: ALP, AST, ALT, 5’NT, GGT, OCT, LAP, LDH
Function                      Ammonia:
                              -Kjeldahl (Digestion) method
                              -Nesslerization reaction
                              -Berthelot reaction
Plasma protein                0.2-0.4 g/dL higher than serum due to fibrinogen
Kjeldahl (Digestion) mtd      Standard reference method
                              Measurement of nitrogen content
                              Serum + Tungstic acid  PFF
                              1g N2 = 6.54g protein
                              15.1-16.8% = N2 content of proteins
                              Rgt: H2SO4
                              End product: NH3
Biuret method                 Most widely used method (IFCC recommended)
                              Req. at least 2 peptide bonds and an alkaline medium
                              Rgts:
                              Alkaline CuSO4
                              Rochelle salt (NaK Tartrate)
                              NaOH
                              KI
                              End product: Violet color (545nm)
Folin-Ciocalteu (Lowry)       Highest analytical sensitivity
method                        Oxidation of phenolic compounds (tyrosine, tryptophan, histidine)
                              Rgts:
                              Phenol (or phosphotungstic-molybdic acid)
                              Biuret (color enhancer)
                              End product: Blue color
Electrophoresis               MI: elevated APRs (AAT, HPG, a1-x)
Gamma-spike                   Monoclonal gammopathy (multiple myeloma)
Beta-gamma bridging           In serum: Hepatic cirrhosis (IgA)
                              In plasma: normal (fibrinogen)
Alpha2-globulin band spike    Nephrotic syndrome
Alpha1-globulin flat curve    Juvenile cirrhosis (AAT deficiency)
Alpha1, alpha2, beta-         Inflammation
globulin band spikes
Polyclonal gammopathy         Chronic inflammation (RA, malignancy)
Small spikes in beta region   IDA (transferrin)
Free hemoglobin               “Blip” in the late alpha2 or early beta region
Refractometry                 Refractive index
Turbidimetric and             SSA
nephelometric methods         TCA
Salt fractionation            Salt: Sodium sulfate
Albumin                       Soluble:
                              Water
                              Moderately concentrated salt solution
                              Concentrated salt solution
                              Insoluble:
                              Hydrocarbon solvents
                              Highly concentrated salt solution
                              Saturated salt solution



                                                                                        lec.mt 04 |Page | 27
Globulin                 Soluble:
                         Hydrocarbon solvents
                         Weak salt solution
                         Insoluble:
                         Water
                         Saturated salt solution
                         Concentrated salt solution
Prothrombin time         Differentiates intrahepatic disorder (prolonged PT) from extrahepatic
                         obstructive liver disease (normal PT)
Albumin                  Inversely proportional to the severity of the liver disease
Hepatic cirrhosis        Low total protein + low albumin
Bromcresol green         Most commonly used dye for albumin
Bromcresol purple        Most specific dye for albumin
Other dyes for albumin   Hydroxyazobenzene benzoic acid (HABA)
                         Methyl orange (MO)
Nephrotic syndrome       Albumin excretion: 20-30 g/day
Analbuminemia            (-) albumin
Bisalbuminemia           EP: 2 albumin bands
                         Therapeutic drugs in serum
Inverted A/G ratio       Hepatic cirrhosis (IgA)
                         Multiple Myeloma (IgG)
                         Waldenström’s macroglobulinemia (IgM)
                         Chronic inflammation
Bilirubin                Derived from hemoglobin myoglobin, catalase and cytochrome oxidase
Heme oxygenase           Protoporphyrin  Biliverdin
Biliverdin reductase     Biliverdin B1
Urobilinogen             Deconjugated bilirubin
Bilirubin 1              Non-polar bilirubin
                         Free/Slow bilirubin
Bilirubin 2              Polar bilirubin
                         One-minute/prompt bilirubin
                         Regurgitative bilirubin
Delta bilirubin          Bilirubin tightly bound to albumin
                         Delta bilirubin = TB-DB+IB
Jaundice                 Bilirubin >2 or 3 mg/dL
Pre-hepatic jaundice     Hemolytic
                         B1 = increased
                         B2 = normal
                         UG = increased
                         UB = negative
Hepatic jaundice         Hepatocellular
                         B1 = increased
                         B2 = increased
                         UG = increased
                         UB = positive
                         ALT = increased
                         AST = increased
Post-hepatic jaundice    Obstructive
                         B1 = normal
                         B2 = increased
                         UG = decreased/negative
                         UB = positive
                                                                                   lec.mt 04 |Page | 28
ALP = increased
                           GGT = increased
                           Cholesterol = increased
Gilbert’s syndrome         Bilirubin transport deficit (uptake)
                           B1 = increased
                           B2 = decreased
Crigler-Najjar syndrome    Conjugation deficit
                           Type I = total UDPGT deficiency
                           Type II = partial UDPGT deficiency
                           B1 = increased
                           B2 = decreased
                           Danger: Kernicterus
                           Bile is colorless
Dubin-Johnson syndrome &   Bilirubin excretion deficit
Rotor syndrome             Blockade of excretion into the canaliculi
                           TB = increased
                           B2 = increased
Lucey-Driscoll syndrome    Circulating inhibitor of bilirubin conjugation
                           B1 = increased
Methods (Bilirubin)        Free from hemolysis and lipemia
                           Store in the dark
                           Measured ASAP or w/in 2-3 hours
Van den Berg reaction      Diazotization of bilirubin
Evelyn and Malloy method   Accelerator: Methanol
                           Diazo rgts:
                           Diazo A (0.1% Sulfanilic acid + HCl)
                           Diazo B (0.5% Sodium nitrite)
                           Diazo blank (1.5% HCl)
                           (+) pink to purple azobilirubin
                           Affected by hemolysis
Jendrassik and Grof        Candidate reference method
                           Accelerator: Caffeine sodium benzoate
                           Buffer: Sodium acetate
                           Ascorbic acid: terminates the initial reaction and destroys the excess diazo rgt
                           Not falsely elevated by hemolysis
                           Total bilirubin is measured 15 minutes after adding methanol or caffeine soln
Bilirubin                  Absorbs light maximally at 450nm
Rosenthal White method     Double collection method
                           Collection:
                           -After 5 mins (50% dye retention)
                           -After 30 mins (0% dye retention)
Mac Donald method          Single collection method
                           Collection:
                           -After 45 mins (+/- 5% dye retention)
Ammonia                    From deamination of amino acids
                           Elevated levels are neurotoxic and often associated w/ encephalopathy and
                           acetaminophen poisoning
                           Diagnosis of hepatic failure and Reye’s syndrome
                           In severe liver disorder: NH3  circulation  brain (conv. to glutamine) 
                           increases pH  compromise the Kreb’s cycle  Coma due to lack of ATP for the
                           brain


                                                                                       lec.mt 04 |Page | 29
Methods (Ammonia)           Specimen: Heparin or EDTA plasma
                            Fasting is required
                            Avoid smoking
                            Prolonged standing of specimen: increased NH3 due to deamination
                            Place on iced water immediately
                            Avoid hemolysis
Kjeldahl (Digestion)        Specimen  PFF
method                      N2 ----------(hot conc. H2SO4 + CuSO4 + Hg + Selenium)----------> NH3
Nesslerization of ammonia   NH3 + K2Hg2I2 ----------(Gum Ghatti)----------> NH2Hg2I2
                            End color:
                            Yellow (low to moderate N2)
                            Orange brown (high N2)
Berthelot reaction          NH3 + Phenol + Hypochlorite -----(Na Nitroprusside)-----> Indophenol blue
Normal Values               Total protein = 6.5-8.3 g/dL
(Liver Function Tests)      Albumin = 3.5-5.0 g/dL
                            Globulin = 2.3-3.5 g/dL
                            α1-globulin = 0.1-0.3 g/dL
                            α2-globulin = 0.6-1.0 g/dL
                            β-globulin = 0.7-1.1 g/dL
                            γ-globulin = 0.8-1.6 g/dL
                            Total bilirubin = 0.2-1.0 mg/dL
                            Indirect bilirubin = 0.2-0.8 mg/dL
                            Direct bilirubin = 0-0.2 mg/dL
                            Urobilinogen:
                            Urine = 0.1-1.0 Ehrlich units/2hrs (or 0.54 Ehrlich units/day)
                            Stool = 75-275 Ehrlich units/100g feces (or 75-400 Ehrlich units/24hrs)
                            Ammonia = 19-60 μg/dL
                                                  Enzymes
Enzyme concentration        Serum
                             Enzyme concentration =  reaction rate
Substrate concentration     Reagent
                            If enzyme > substrate,  substrate =  reaction rate
Saturation kinetics         When substrate concentration reaches a maximal value, higher concentration
                            of substrate no longer results in increased rate of reaction
Cofactors                   Nonprotein entities
Coenzymes                   Organic compound
                            Ex. NADP
                             Coenzyme =  Velocity
Activators                  Inorganic ions
                            Alters spatial configuration of the enzyme for proper substrate binding
                            Ex. Ca2+ (#1 activator), Zn2+ (LDH), Cl- (AMS), Mg2+ (CK, ALP)
Metalloenzymes              Inorganic ion attached to a molecule
                            Ex. Catalase, cytochrome oxidase
Inhibitors                  Interferes with the enzymatic reactions
Competitive inhibitor       Binds to the active site of an enzyme
                            Reversible (Substrate > Inhibitor)
Noncompetitive inhibitor    Binds to the allosteric site (cofactor site)
                            Irreversible
Uncompetitive inhibitor     Binds to the enzyme-substrate complex
                             Substrate = ES = Inhibition
Isoenzymes                  Same catalytic reactions but slightly different molecular structures
                            Fractionation of isoenzymes

                                                                                     lec.mt 04 |Page | 30
Temperature               37’C = optimum temperature for enzyme activity
                          Temperature = Reaction rate (movement of molecules)
40-50’C                   Denaturation of enzymes
60-65’C                   Inactivation of enzymes
Temperature coefficient   For every 10OC increase in temperature, there will be a two-fold increase in
(Q10)                     enzyme activity
pH                        Most physiologic reactions occur in the pH range of 7-8
Storage                   Enzymes: -20’C = for longer period of time
                          Substrate and Coenzymes: 2-8’C
                          LDH (LD4 & 5): Room temperature
Hemolysis                 Mostly increases enzyme concentration
Lactescence or milky      Decreases enzyme concentration
specimen
Enzyme nomenclature       1st digit: classification
                          2nd and 3rd digits: subclass
                          4th digit(s): serial number
Enzyme classification     “OTHLIL”
                          Oxidoreductases
                          Transferases
                          Hydrolases
                          Lyases
                          Isomerases
                          Ligases
Oxidoreductases           Redox reaction
                          Dehydrogenases:
                          -Cytochrome oxidase
                          -LDH
                          -MDH
                          -Isocitrate dehydrogenase
                          -G-6-PD
Transferases              Transfer of a chemical group other than hydrogen from 1 substrate to another
                          Kinases, Transaminases, Aminotransferases:
                          -CK
                          -GGT
                          -AST
                          -ALT
                          -OCT
Hydrolases                Hydrolysis/splitting by addition of water
                          Esterases:
                          -ACP
                          -ALP
                          -CHS
                          -LPS
                          Peptidases:
                          -Trypsin
                          -Pepsin
                          -LAP
                          Glycosidases:
                          -AMS
                          -Galactosidases
Lyases                    Removal of groups w/o hydrolysis (product contains double bonds)
                          Aldolase

                                                                                      lec.mt 04 |Page | 31
Decarboxylases:
                             -Glutamate decarboxylase
                             -Pyruvate decarboxylase
                             -Tryptophan decarboxylase
Isomerases                   Intramolecular arrangements
                             Glucose phosphate isomerase
                             Ribose phosphate isomerase
Ligases                      Joining of 2 substrate molecules
                             Synthases
Active site                  Water-free cavity
                             Where the substrate interacts
Allosteric site              Cavity other than the active site
                             May bind regulatory molecules
Prosthetic group             Coenzyme that is bound tightly to the enzyme
Holoenzyme                   Apoenzyme + Prosthetic group
Zymogen/proenzyme            Inactive form of enzyme
Emil Fisher’s/Lock and Key   Shape of the key (substrate) must fit into the lock (enzyme)
theory
Kochland’s/Induced fit       Based on the substrate binding to the active site of the enzyme
theory                       Acceptable theory
Enzyme kinetics              Enzymes catalyze reactions by lowering the activation energy level that the
                             substrate must reach for the reaction to occur
Absolute specificity         Enzyme combines w/ only 1 substrate and catalyzes only 1 reaction
Group specificity            Enzymes combine w/ all the substrates in a chemical group
Bond specificity             Enzymes reacting w/ specific chemical bonds
Zero-order reaction          Reaction rate depends only on enzyme concentration
                             Independent on substrate concentration
First-order reaction         Reaction rate is directly proportional to substrate concentration
                             Independent on enzyme concentration
Measurement of enzyme        Change in substrate concentration
activity                     Change in product concentration
                             Change in coenzyme concentration
International Unit           1 micromole of substrate/minute
Katal Unit                   1 mole of substrate/second
Nonkinetic assay             Absorbance is made at 10-second intervals for 100 seconds
Alkaline Phosphatase         pH = 10.5
                             405nm
                             Electrophoresis:
                             (+) Liver  Bone (Regan)  Placenta  Intestine (-)
                             Heat fractionation:
                             (Δ Stable) Regan  Placenta  Intestine  Liver  Bone (Δ Labile)
Phenylalanine                Inhibits Regan, placental and intestinal ALP
L-leucine                    Inhibits Nagao ALP
Levamisole                   Inhibits liver and bone ALP
3M urea                      Inhibits bone ALP
Methods (ALP)                Low temperature = Increased ALP
                             1. Bowers and McComb (PNPP) – IFCC recommended
                             2. Bessy, Lowry and Brock (PNPP)
                             3. Bodansky, Shinowara, Jones, Reinhart = BGP (beta glycerophosphate)
                             4. King and Armstrong = PP (phenylphosphate)
                             5. Klein, Babson & Read = Buffered PPP (phenolphthalein phosphate)
                             6. Huggins and Talalay = PPDP (phenolphthalein diphosphate)
                                                                                            lec.mt 04 |Page | 32
7. Moss = ANP (alpha naphthol phosphate)
Increased ALP              Sprue
                           Hyperparathyroidism
                           Rickets (children) and osteomalacia (adults)
Acid Phosphatase           pH = 5.5
                           405nm
                           Sources: Prostate (major), RBC, platelets, bone
Prostatic ACP              Inhibited by L-tartrate ions
RBC ACP                    Inhibited by cupric and formaldehyde ions
Methods (ACP)              Room temperature (1-2 hrs) = decreased ACP
                           Thymolphthalein monophosphate = specific substrate, substrate of choice
                           (endpoint)
                           Alpha-naphthyl phosphate = preferred for continuous monitoring methods
                           1. Gutman and Gutman = PP
                           2. Shinowara = PNPP
                           3. Babsonm Read and Phillips = ANP (continuous monitoring)
                           4. Roy and Hillman = Thymolphthalein monophosphate (endpoint)
Aspartate Aminotransferase pH 7.5
(AST/SGOT)                 340nm
                           Sources: Cardiac tissue > Liver > Skeletal muscle > Kidney, pancreas, RBCs
Alanine Aminotransferase   pH 7.5
(ALT/SGPT)                 340nm
                           Major Source: Liver
Methods (AST and ALT)      1. Karmen method = Kinetic
                           2. Reitman and Frankel = Endpoint
                           -Color developer: DNPH
                           -Color intensifier: 0.4N NaOH
Increased Transaminases    DeRitis ratio (ALT:AST) >1.0 = Acute hepatitis (Highest)
                           20x = viral or toxic hepatitis
                           Moderate elevation = chronic hepatitis, hepatic cancer, IM
                           Slight elevation = Hepatic cirrhosis, alcoholic hepatitis, obstructive jaundice
Amylase                    Smallest enzyme (appears in urine)
                           Earliest pancreatic marker
                           P3: most predominant pancreatic AMS isoenzyme in AP
                           Isoenzymes:
                           S-type (ptyalin): anodal
                           P-type (amylopsin): cathodal
Methods (AMS)              Samples w/ high activity of AMS should be diluted w/ NaCl to prev. inactivation
                           Salivary AMS = inhibited by wheat germ lectin
                           Substrate: Starch
Saccharogenic              Reducing sugars produced
                           Classic reference method (SU)
Amyloclastic               Degradation of starch
Chromogenic                Increase in color intensity
Coupled-enzyme             Continuous-monitoring technique
Lipase                     Late marker (AP)
                           Most specific pancreatic marker
Methods (LPS)              Substrate: Olive oil/Triolein
                           1. Cherry Crandal (Reference method)
                           2. Tietz and Fiereck
                           3. Peroxidase coupling (most commonly used method)
Lactate dehydrogenase      Lacks specificity

                                                                                       lec.mt 04 |Page | 33
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
1. must to know in clinical chemistry 001
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1. must to know in clinical chemistry 001

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Atomic Absorption Spectroscopy
 

1. must to know in clinical chemistry 001

  • 1. MUST TO KNOW IN CLINICAL CHEMISTRY (From CC by Rodriguez) Quality Control Practicability Method is easily repeated Reliability Maintain accuracy and precision Intralab/Interlab QC Daily monitoring of accuracy and precision Interlab/External QC Proficiency testing (Reference lab) Long-term accuracy Difference of >2: not in agreement w/ other lab QC materials Available for a min. of 1 yr Bovine control materials Preferred (Human: biohazard) Not for immunochem, dye-binding and bilirubin Matrix effect Improper product manufacturing Unpurified analyte Altered protein Precision study First step in method evaluation Nonlab. personnel 29% of errors (lab results) SD Dispersion of values from the mean CV Index of precision Relative magnitude of variability (%) Variance SD2 Measure of variability Inferential statistics Compare means or SD of 2 groups of data T-test Means of 2 groups of data F-test SD of 2 groups of data Cumulative Sum Graph V-mask (CUSUM) Earliest indication of systematic errors (trend) Youden/Twin Plot Compare results obtained from diff. lab Shewhart Levey-Jennings Graphic representation of the acceptable limits of variation Chart Trend Gradual loss of reliability Cause: Deterioration of reagents (Systematic error) Shift Values: one side or either side of the mean Cause: Improper calibration (Systematic error) Outliers Values: far from the main set of values Highly deviating values Random or systematic errors Kurtosis Degree of flatness or sharpness Precision Random error Accuracy Systematic error Random error Causes: (Imprecision; -Mislabeling Indeterminate) -Pipetting error -Improper mixing of sample and reagents -Voltage/Temperature fluctuation -Dirty optics Parameters: SD and CV Systematic error Causes: (Inaccuracy/Determinate) -Improper calibration -Deterioration of reagents -Contaminated solution -Sample instability/unstable reagent blanks lec.mt 04 |Page | 1
  • 2. -Diminishing lamp power -Incorrect sample and reagent volume Parameter: Mean Multirule Shewhart Control rules + Control chart procedure Test method Westgard: at least 40 samples Reference method Westgard: preferably 100 samples Analytical Run Control and patient specimens assayed, evaluated, and report together Physiologic Limit Referred to as absurd value POCT Performed by nonlab personnel Quality Assurance Tripod: Program development Assessment and monitoring Quality improvement Quality Patient Care Test request forms, clear instruction for patient prep., specimen handling… Reference Range/ Interval At least 120 individuals should be tested in each age and sex category Range/ Reference Values Analytical Methods Wavelength Distance bet 2 successive peaks (nm) Lower frequency = Longer wavelength (Ex. Red) Higher frequency = Shorter wavelength (Ex. Violet) Spectrophotometric meas. Meas. light intensity in a narrower wavelength Photometric measurement Meas. light intensity w/o consideration of wavelength Multiple wavelength (uses filter only) LASER Light Amplification by Stimulated Emission of Radiation Light source for spectrophotometry Visible region Tungsten light bulb Mercury arc UV Deuterium lamp Mercury arc Xenon lamp Hydrogen lamp IR Merst glower Globar (Silicone carbide) Stray light Wavelength outside the band Most common cause of loss of linearity Diffraction gratings Most commonly used monochromator Cutting grooves Prisms Rotatable Nickel sulfate Prevents stray light Cutoff filter Anti-stray light Bandpass ½ peak transmittance Alumina silica glass cuvet Most commonly used cuvet Quartz/plastic cuvet UV Borosilicate glass cuvet Strong bases Photodetector Converts transmitted light into photoelectric energy Barrier layer cell/ Simplest detector photocell/ photovoltaic cell No external voltage For filter photometers Phototube Contains anode and cathode Req external voltage Photomultiplier tube Most common type lec.mt 04 |Page | 2
  • 3. Most sensitive UV and visible region Galvanometer/Ammeter Meter or read-out device Absorbance A = abc (a = absorptivity; b = length of light (1cm); c = concentration) A = 2 – log%T Double beam spectro. Splits monochromatic light into two components: One beam  sample One beam  reference soln or blank (corrects for variation in light source intensity) Double-beam in space 2 photodetectors (sample beam and reference beam) Double-beam in time 1 photodetector Monochromatic light  sample cuvet and reference cuvet Dydimium filter 600 nm Holmium oxide filter 360 nm Reagent blank Color of reagents Sample blank Optical interference (Hgb) FEP Meas. light emitted by a single atom burned in a flame Principle: Excitation Lt. source and cuvette: Flame For excited ions (Na+, K+) Cesium and Lithium Internal standards (FEP) Correct variations in flame Lithium Preferred internal std Potent antidepressant AAS Meas. light absorbed by atoms dissociated by heat Principle: Dissociation (unionized, unexcited, ground state) Lt. source: Hollow-cathode lamp For unexcited trace metals (Ca++ and Mg++) More sensitive than FEP Atomizer (nebulizer) Convert ions  atoms Chopper Modulate the light source Lanthanum/Strontium Complex with phosphate chloride Avoid calcium interference Volumetric (Titrimetric) Unknown sample is made to react with a known solution in the presence of an indicator Turbidimetry Light blocked Meas. abundant large particles (Proteins) Depend on specimen concentration and particle size Nephelometry Meas. amt of Ag-Ab complexes Scattered light Depends on wavelength and particle size Electrophoresis Migration of charged particles in an electric field Iontophoresis Migration of small charged ions Zone electrophoresis Migration of charged macromolecules Endosmosis Movement of buffer ions and solvent relative to the fixed support Ex: gamma globulins Cellulose acetate Molecular size Agarose gel Electrical charge Polyacrylamide gel Charge and molecular size 20 fractions (ex. isoenzymes) Electrophoretic mobility Directly proportional to net charge Inversely proportional to molecular size & viscosity of the supporting medium lec.mt 04 |Page | 3
  • 4. Isoelectric focusing Molecules migrate through a pH gradient pH = pI For isoenzymes: same size, different charge Densitometry Scan & quantitate electrophoretic pattern Capillary electrophoresis Electro-osmotic flow Southern blot DNA Northern blot RNA Western blot Proteins Chromatography Separation by specific differences in physical-chemical characteristics of the different constituents Paper chromatography Fractionation of sugar and amino acid Sorbent: Whatman paper TLC Screening: Drugs Retention factor (Rf) value Relative distance of migration from the point of application Rf = Distance leading edge of component moves Total distance solvent front moves Gas chromatography Separation of steroids, barbiturates, blood, alcohol, and lipids Volatile compounds Specimens  vaporized Mobile phase: Inert gases Gas Solid chromatography Differences in absorption at the solid phase surfaces Gas Liquid chromatography Differences in solute partitioning between the gaseous mobile phase and the liquid stationary phase Mass Spectrometry Fragmentation and ionization GC-MS Gold standard for drug testing MS/MS Detect 20 inborn errors of metabolism from a single blood spot HPLC Most widely used liquid chromatography Fractionation of drugs, hormones, lipids, carbohydrates and proteins Hydrophilic gel Gel filtration Separation of enzymes, antibodies and proteins Ex: Dextran and agarose Hydrophobic gel Gel permeation Separation of triglyceride and fatty acid Ex: Sephadex Ion exchange Separation depends on the sign and ionic charge density chromatography Partition chromatography Based on relative solubility in an organic solvent (nonpolar) and an aqueous solvent (polar) Affinity chromatography For lipoproteins, CHO and glycated hemoglobins Adsorption Based on differences between the adsorption and desorption of solutes at the chromatography surfaces of a solid particle Fluorometry/Molecular Det. amt. of lt. emitted by a molecule after excitation by electromagnetic Luminescence Spectro. radiation Lt. sources: Mercury arc and Xenon lamp (UV) Lt. detector: Photomultiplier tubes 2 monochromators: Primary filter – selects wavelength absorbed by the solution to be measured Secondary filter – prevents incident light from striking the photodetector Sensitivity: 1000x than spectro Quenching Major disadvantage of fluorometry pH and temperature changes, chemical contaminants, UVL changes lec.mt 04 |Page | 4
  • 5. Instrumentation Borosilicate glasswares For heating and sterilization Ex: Pyrex and Kimax Boron-free/Soft glasswares High resistance to alkali Corex (Corning) Special alumina-silicate glass Strengthened chemically than thermally 6x stronger than borosilicate Vycor (Corning) For high thermal, drastic heat and shock Can be heated to 900OC Flint glass Soda-lime glass + Calcium, Silicon, Sodium oxides Easy to melt For making disposable glasswares TD: To deliver Exact amount TC: To contain Does not disperse the exact volume Blowout w/ etched rings on top of pipet Self-draining w/ o etched rings Drain by gravity Transfer pipet Volumetric: for non-viscous fluid; self-draining Ostwald folin: for viscous fluid; w/ etched ring Pasteur: w/o consideration of a specific volume Automatic macro-/micropipets Graduated or measuring Serological: w/ graduations to the tip (blowout) pipet Mohr: w/o graduations to the tip (self-draining) Bacteriologic Ball, Kolmer and Kahn Micropipettes: <1 mL Micropipettes TC pipets: Sahli-Hellige pipet Lang-Levy pipet RBC and WBC pipets Kirk and Overflow pipets Air displacement pipet Piston: suction Disposable tip Positive displacement pipet Piston  barrel (like a hypodermic syringe) Dispenser/Dilutor pipet Liquid: common reservoir  dispense repeatedly Distilled H2O Calibrating medium for TD pipettes Mercury Calibrating medium for TC pipettes Acid dichromate Cleaning solution for glasswares (H2SO4 + K2Cr2O4) Continuous flow analyzer Common reaction vessel Air bubbles: separates and cleans Glass coil: mix Examples: “STS” Simultaneous Multiple Analyzer (SMA) Technicon Autoanalyzer II SMAC Centrifugal analyzer Acceleration and deceleration of the rotor Advantage: Batch analysis Examples: “RICC” Cobas-Bio (Roche) IL Monarch CentrifiChem lec.mt 04 |Page | 5
  • 6. RotoChem Discrete Analyzer Most popular Req. vol: 2-6 μL Uses positive-displacement pipets Run multiple-tests-one-sample-at-a-time Random access capability (STAT) Examples: Vitros Dimension Dade Beckman ASTRA System (4 & 8) Hitachi Bayer Advia Roche Cobas Integra 800 Roche Analytics P Module Automated Clinical Analyzer (ACA) Star (Dade) Dupont ACA Abbott ABA-100 Bichromatic Analyzer ABA-200 VP Analyzer American Monitor KDA Olympus Demand Thin-Film Analyzers 4 or 5 layers: (Dry slide technology) -Spreading layer -Scavenger layer - Ascorbate Oxidase -Reagent layer -Indicator layer -Support layer Colored reaction  Reflectance spectrophotometry Examples: “KV2(75)” Kodak Ektachem Vitros 750XRC Vitros 550XRC Carry over Transport of quantity of analyte or rgt from one specimen rxn into another, and contaminating a subsequent one Batch testing All samples loaded at the same time Single test is conducted on each sample Parallel testing One specimen More than one test is analyzed Random access testing Any sample Any test Any sequence STAT Sequential testing Multiple tests analyzed one after another on a given specimen Open reagent system System other than manufacturer’s reagents can be utilized for measurement Closed reagent system The operator can only use the manufacturer’s reagents Patient Preparation Exercise Increased: GU2FT C2L3A5P2 GH Urea Urinary protein (Proteinuria) Fatty acid Testosterone lec.mt 04 |Page | 6
  • 7. CPK (muscle) Creatinine (muscle) Lactate LH LD (muscle) ACP Aldolase (muscle) AST ALT Ammonia Pyruvate Prolactin Decreased: Glucose Fist clenching Increased: “LPP” Lactate Potassium Phosphate Fasting 8-16 hours: Glucose Lipids Lipoproteins Increased: Bilirubin (48 hours) Triglyceride (72 hours) Basal state collection Glucose Cholesterol Triglyceride Electrolytes Diet Increased: “GLUC2H” Glucose Lipids Urea (High protein diet) Caffeine: increases glucose Catecholamines 5-HIAA (From Serotonin) Turbidity/Lactescence Triglyceride >400mg/dL Icterisia Bilirubin: 25.2 mg/dL Icteric samples Interfere with: "TACGu” Total Protein Albumin Cholesterol Glucose Upright/supine (lying) Preferred position position Patient should be seated/supine at least 20 mins before blood collection to prevent hemodilution or hemoconcentration Supine  Sitting/Standing Vasoconstriction  Reduced plasma volume Increased: “ECA” Enzymes Calcium Albumin Sitting  Supine Hemoconcentration lec.mt 04 |Page | 7
  • 8. Increased: “P(u)BLIC” Proteins BUN Lipids Iron Calcium Standing  Supine Hemodilution Decreased: “TLC” Triglycerides Lipoproteins Cholesterol Prolonged standing Increased: K+ (muscles) Prolonged bedrest Decreased: Albumin (Fluid retention) Tourniquet Recommended: 1 minute application Prolonged tourniquet app. Hemoconcentration Anaerobiosis Increased: “C2LEA2K” Calcium Cholesterol Lactate Enzymes Ammonia Albumin K+ Tobacco smoking (Nicotine) Increased: “TUNG2C3” Triglycerides Urea Nonesterified fatty acid Glucose GH Catecholamines Cortisol Cholesterol Alcohol ingestion Increased: “THUG” Triglycerides Hypoglycemia (chronic alcoholism) Uric acid/Urates GGT Ammonia Increases by 100-200μg/L/cigar Stress (anxiety) Increased: “LAGIC” Lactate Albumin Glucose Insulin Cholesterol Drugs Medications affecting plasma volume can affect protein, BUN, iron, calcium Hepatotoxic drugs: increased liver function enzymes Diuretics: decreased sodium and potassium Diurnal variation "CA3PI2TG” Cortisol ACTH ACP lec.mt 04 |Page | 8
  • 9. Aldosterone Prolactin Iron Insulin Thyroxine GH Specimen Collection and Handling Sleeping patients Must be awakened before blood collection Unconscious patients Ask nurse or relative Identification bracelet Venipuncture Median Cubital (1st)  Cephalic (2nd)  Basilic (3rd) Tourniquet Velcro or Seraket type 3-4 inches above the site Not exceed 1 minute Needle Bevel up 15-30O angle Length: 1 or 1.5 inch (Butterfly needle: ½ to ¾ inch) After blood collection Cotton  site Apply pressure for 3-5 minutes BP cuff as tourniquet Inflate to 60 mmHg Benzalkonium chloride Disinfectant for ethanol testing (Zephiran) Dilution – 1:750 IV line on both arms Discontinue IV for 2 minutes Collect sample below the IV site Initial sample (5mL)  discard IV fluid contamination Increased: Glucose (10% contam. w/ 5% dextrose  increased bld glucose by 500 mg/dL) Chloride Potassium Sodium Decreased: Urea Creatinine Renin blood level Collected after a 3-day diet, from a peripheral vein Basal state collection Early morning blood collection 12 hours after the last ingestion of food Lancet 1.75mm: preferred length to avoid penetrating the bone Incision (Skin puncture) <2.0mm (infants and children) 2-3mm (adults) 1.5-2.4mm Distance from the skin surface to bone or cartilage (middle finger) Arterialized capillary blood Earlobe: Preferred site Lateral plantar heel surface: most commonly used site Flea Minute metal filling which may be inserted into the capillary tube before collecting blood to help mix the specimen while the blood is entering the tube Indwelling umbilical artery Best site for blood gas analysis (newborns) 1000-3000 RCF for 10 mins Centrifugation requirement Hemolysis Increased: “KLA6MP ITC2” -K+ -LDH (150x) -ACP -ALP lec.mt 04 |Page | 9
  • 10. -Aldolase -ALT -AST -Albumin -Mg2+ -Phosphorus -Iron -Total protein Affects bilirubin levels Inhibits lipase Refrigeration/Chilling Required for: “ABCGLRP2” (Low temp) Ammonia Blood gases Catecholamines Gastrin Lactic acid Renin PTH Pyruvate Decreased: LD 4 and 5 Increased: ALP Photosensitive analytes Bilirubin Beta-carotene Folate Porphyrins Vitamins A and B6 Oxalate Insoluble salt 1-2 mg/mL blood Citrate Non-ionized form 3.2-3.8 g/dL (1:9 ratio) EDTA Chelation 1-2 mg/mL blood Versene: disodium salt Sequestrene: Dipotassium salt Fluoride Weakly dissociated calcium component 2 mg/mL blood: anti-glycolytic 10 mg/mL blood: anticoagulant Heparin A.k.a. Mucoitin polysulfuric acid Universal anticoagulant Antithrombin 0.2 mg/mL blood Lithium heparin For glucose, BUN, ionized calcium, electrolyte studies (K+: best) and creatinine Orange top tube Additive: Thrombin Royal blue top tube Additives: None; Na2EDTA Sodium heparin Brown top tube Lead testing Tan top tube Lead testing Black top tube Additive: Buffered sodium citrate lec.mt 04 |Page | 10
  • 11. For ESR Respinning gel tubes Increases potassium Thixotropic gel Gel separator (SG: 1.04) Serum: (SG: 1.03) RBC: (SG: 1.05) Laboratory Mathematics % w/v Grams of solute = % solution desired x total volume desired 100 % v/v mL of solute = % solution desired x total volume desired 100 % w/w Grams of solute = % solution desired x grams of the total solution 100 Molarity M= _grams of solute_______ GMW x volume of solution Moles Mol = weight (grams) GMW To prepare a molar solution Grams of solute = Molarity x GMW of the solute x Volume (L) desired To convert % w/v to M = % w/v  10 Molarity GMW Normality N = _Grams of solute_ EW x volume (L) Equivalent weight (EW) EW = __MW___ valence To prepare a normal Grams of solute = Normality x EW x Volume (L) solution of solids To convert % w/v to N = w/v  10 Normality EW Normality N = Molarity x Valence Molarity M = Normality valence Molality m = Grams of solute__ MW x kg of solvent Milliequivalents mEq/L = mg/dL  10  valence MW Millimoles mmol/L = mg/dL  10 MW Ratio Ratio = _Volume of solute_ Volume of solvent Dilution Dilution = __Volume of solute__ Volume of solution 0.179 Conversion factor for iron (mg/dL  μmol/L) 0.01 Conversion factor for phospholipid (g/dL to g/L) 2.27 Conversion factor for folate Analytical reagent (AR) For qualitative and quantitative analyses grade For accuracy Established by American Chemical Society (ACS) Uses: Trace metal analysis and preparation of standard solutions Ultrapure reagents Additional purification steps Ex: Spectrograde, nanograde, HPLC grade Uses: Chromatography, atomic absorption, immunoassays Chemically Pure (CP) or Indicates that the impurity limitations are not stated lec.mt 04 |Page | 11
  • 12. Pure Grade Purity is delivered by meas. of melting point or boiling point Technical/Commercial In manufacturing grade Never used in clin. lab. testing United States For human consumption Pharmacopoeia (USP) and Not applicable for lab. analysis National Formulery (NF) Purpose: For drug manufacturing Preparation of reagent Filtration (1st)  Distillation, Ion exchange, Reverse Osmosis grade water Type I Rgt Water Min. interference Max. water purity Used immediately For ultramicrochemical analyses, measurements of nanogram or subnanogram concentrations, tissue or cell methods (microscopy) and preparation of standard solutions Uses: FEP, AAS, blood gases and pH, enzyme studies, electrolyte testing, HPLC, trace metal and iron studies Type II Rgt Water For clinical laboratory use (hematology, microbiology, immunology, chemistry) For prep. of rgts and QC materials Type III For washing glasswares For urinalysis, parasitology and histology Distilled water Purified to remove almost all organic materials Deionized water Free from mineral salts; removed by ion exchange processes Organic material may still be present Occupational Safety and Req. manuf. to indicate lot no., physical or biological health hazard of the chem.. Health Act (OSHA) rgts, and precautions for safe use and storage College of American Recommends that a lab. document culture growth, pH and specific water Pathologists (CAP) resistance on reagent grade water Tests for water purity Microbiological content pH Resistivity Chemical oxygen demand Ammonia Ions Metals Detergent-contaminated Alkaline pH water Hard water Contains calcium, iron and other dissolved elements NCCLS Now: Clinical and Laboratory Standards Institute (CLSI) Dilute solution Relatively little solute Concentrated solution Large quantity of solute in solution Saturated solution Excess of undissolved solute particles Super saturated solution Greater concentration of undissolved solute particles than does a saturated solution of the same substance Primary standard Highly purified (IUPAC) Measured directly to produce a substance of exact known concentration Secondary standard Low purity Concentration is determined by comparison w/ a primary standard Laboratory Safety National Fire Protection Association (NFPA) Classification of Fires Class A fire Ordinary combustibles: paper, cloth, rubbish, plastics, wood Extinguisher: Water (A), Dry chemical (ABC), loaded steam lec.mt 04 |Page | 12
  • 13. Class B fire Flammable liquids: grease, gasoline, paints, oil Extinguisher: Dry chemical (ABC), carbon dioxide (BC), halon foam (BC) Class C fire Electrical equipment and motor switches Extinguisher: Dry chemical (ABC), Carbon dioxide (BC), halon (BC) Class D fire Flammable metals: mercury, magnesium, sodium, lithium Extinguisher: Metal X Fought be fire fighters only Class E fire Detonation (Arsenal fire) Allowed to burn out and nearby materials protected Standard Hazards Identification System (Diamond-shaped color coded symbol) Blue quadrant Health hazard Red quadrant Flammable hazard Yellow quadrant Reactivity/Stability hazard White quadrant Other special information Chemical spills 1st step: assist/evacuate personnel 1:10 dilution of chlorine To disinfect and clean bench tops bleach (10%) In contact with the area for at least 20 minutes HBV: 10 minutes HIV: 2 minutes Poisonous vapors Chloroform Methanol Carbon tetrachloride Bromide Ammonia Formaldehyde Mercury Flammable and Acetone combustible solvents Ethanol Toluene Methanol Xylene Benzene Isopropanol Heptane Flammable liquids Flash point below 37.8OC Combustible liquids Flash point at or above 37.8OC Strong acids or bases Neutralized before disposal Water should NEVER be added to concentrated acid Ether Deteriorate over time  hazardous Forms explosive peroxides Benzidine Known carcinogen Fumehoods Ventilation: velocity of 100-120 ft/min Safety showers Deliver 30-50 gal/min of H2O at 20-50 psi Carbohydrates Glycol aldehyde The simplest carbohydrate Sucrose Most common nunreducing sugar Pancreas Exocrine: Enzymes (AMS, LPS) Endocrine: Hormones (Insulin, glucagon, somatostatin) Hyperglycemic Hormones “GAG CHET” Glucagon ACTH GH lec.mt 04 |Page | 13
  • 14. Cortisol Human Placental Lactogen Epinephrine Thyroxine Hyperglycemia Electrolyte Imbalance: (≥126 mg/dL) Decreased: Sodium, Bicarbonate Increased: Potassium Hypoglycemia 50-55 mg/dL = Symptoms ≤50 mg/dL = Diagnostic Whipple’s triad Low blood glucose concentration (Hypoglycemia) Typical symptoms Symptoms alleviated by glucose administration 6:1 Ratio of BHA to AA in severe DM (Normal = 1:1) Type 1 DM IDDM Juvenile Onset Brittle Ketosis-prone 80-90% reduction of beta-cells  Symptomatic Type 1 DM HLA-DR3 and DR4 (+) Glutamic acid decarboxylase (GAD65) (+) Insulin autoantibodies (+) Microalbuminuria: 50-200 mg/24 hours = Diabetic nephropathy (-) C-peptide Complications of Type I DM Microvascular disorders: Nephropathy Neuropathy Retinopathy Type 2 NIDDM Adult type/Maturity Onset Stable Ketosis-resistant Receptor-deficient Insulin resistance: relative insulin deficiency Strong genetic predisposition Geneticist’s nightmare If untreated  glucose: >500 mg/dL  nonketotic hyperosmolar coma Gestational DM Screening: 1hr GCT (50g) – bet. 24 and 28 weeks of gestation Confirmatory: 3-hr GTT (100g) Infants: at risk for respiratory distress syndrome, hypocalcemia, hyperbilirubinemia After giving birth, evaluate 6-12 weeks postpartum Converts to DM w/in 10 years in 30-40% of cases OGTT (GDM) FBS = ≥95 mg/dL 1-Hr = ≥ 180 mg/dL 2-Hr = ≥ 155 mg/dL 3-Hr = ≥ 140 mg/dL GDM = 2 plasma values of the above glucose levels are exceeded Impaired fasting glucose FBS = 100-125 mg/dL (Pre-diabetes) Impaired glucose tolerance FBS = <126 mg/dL 2-Hr OGTT = 140-199 mg/dL lec.mt 04 |Page | 14
  • 15. FBS WB = 15% lower than in serum or plasma VB = 7 mg/dL lower than capillary and arterial blood CSF glucose 60-70% of the plasma glucose Peritoneal fluid glucose Same with plasma glucose Plasma glucose increases Fasting: 2 mg/dL/decade w/ age Postprandial: 4 mg/dL/decade Glucose challenge: 8-13 mg/dL/decade w/in 1 hour Separate serum/plasma from the cells (Preferably w/in 30 mins) 5-7%/hr Glycolysis at room temperature 1-2 mg%/hr Glycolysis at refrigerated temperature Copper reduction methods Cupric  Cuprous  Cuprous oxide Folin Wu Cuprous ions + phosphomolybdate  phosphomolybdenum blue Nelson-Somogyi Cuprous ions + arsenomolybdate  arsenomolybdenum blue Neocuproine method Cuprous ions + neocuproine  Cuprous-neocuproine complex (yellow) Benedict’s method Reducing substances in blood and urine Alkaline Ferric Reduction Ferricyanide ---(Glucose)--> Ferrocyanide method (Hagedorn-Jensen) (Yellow) (Colorless) Ortho-toluidine Schiff’s base (Dubowski method) Glucose oxidase Measures beta-D-glucose (65%) Mutarotase Converts alpha-D-glucose (35%) to beta-D-glucose (65%) NADH/NADPH Absorbance at 340nm Polarographic glucose Consumption of oxygen on an oxygen-sensing electrode oxidase O2 consumption α glucose concentration Hexokinase method Most specific method Reference method Uses G-6-PD G-6-PD Most specific enzyme rgt for glucose testing Interfering substances False-decreased (Glucose oxidase) Bilirubin Uric acid Ascorbate Hemolysis (>0.5 g/dL Hgb) Major interfering substance in hexokinase method (false-decreased) Dextrostics Cellular strip Strip w/ glucose oxidase, peroxidase and chromogen OGTT Janney-Isaacson method (Single dose) = most common Exton Rose (Double dose) Drink the glucose load within 5 mins IVGTT For patients with gastrointestinal disorders (malabsorption) Glucose: 0.5 g/kg body weight Given w/in 3 mins 1st blood collection: after 5 mins of IV glucose Requirements for OGTT Ambulatory Fasting: 8-14 hours Unrestricted diet of 150g CHO/day for 3 days Do not smoke or drink alcohol Glucose load 75 g = adult (WHO std) 100 g = pregnant 1.75 g glucose/kg BW = children HbA1c 2-3 months Glucose = beta-chain of HbA1 lec.mt 04 |Page | 15
  • 16. 1% increase in HbA1c = 35 mg/dL increase in plasma glucose 18-20% = prolonged hyperglycemia 7% = cutoff Specimen: EDTA whole blood Test: Affinity chromatography (preferred) IDA and older RBCs High HbA1c RBC lifespan disorders Low HbA1c Fructosamine 2-3 weeks (Glycosylated albumin/ Useful for patients w/ hemolytic anemias and Hgb variants plasma protein ketoamine) Not used in cases of low albumin Specimen: Serum Galactosemia Congenital deficiency of 1 of 3 enzymes in galactose metabolism Galactose-1-phosphate uridyl transferase (most common) Galactokinase Uridine diphosphate galactose-4-epimerase Essential fructosuria Autosomal recessive Fructokinase deficiency Hereditary fructose Defective fructose-1,6-biphosphate aldolase B activity intolerance Fructose-1,6-biphosphate Failure of hepatic glucose generation by gluconeogenic precursors such as deficiency lactate and glycerol Glycogen Storage Disease Autosomal recessive Defective glycogen metabolism Test: IVGTT (Type I GSD) Ia = Von Gierke Glucose-6-Phosphatase deficiency (most common worldwide) II = Pompe Alpha-1,4-glucosidase deficiency (most common in the Philippines) III = Cori Forbes Debrancher enzyme deficiency IV = Andersen Brancher enzyme deficiency V = McArdle Muscle phosphorylase deficiency VI = Hers Liver phosphorylase deficiency VII = Tarui Phosphofructokinase deficiency XII = Fanconi-Bickel Glucose transporter 2 deficiency CSF glucose Collect blood glucose at least 60 mins (to 2 hrs) before the lumbar puncture (Because of the lag in CSF glucose equilibrium time) < 0.5 Normal CSF : serum glucose ratio C-peptide Formed during conversion of pro-insulin to insulin 5:1 to 15:1 Normal C-peptide : insulin ratio D-xylose absorption test Differentiate pancreatic insufficiency from malabsorption (low blood or urine xylose) Gerhardt’s ferric chloride Acetoacetate test Nitroprusside test 10x more sensitive to acetoacetate than to acetone Acetest tablets Acetoacetate and acetone Ketostix Detects acetoacetate better than acetone KetoSite assay Detects beta-hydroxybutyrate but not widely used Normal Values RBS = <140 mg/dL (Carbohydrates) FBS = 70-100 mg/dL HbA1c = 3-6% Fructosamine = 205-285 μmol/L 2-Hr PPBS = <140 mg/dL GTT: 30 mins = 30-60 mg/dL above fasting lec.mt 04 |Page | 16
  • 17. 1-Hr = 20-50 mg/dL above fasting 2-Hr = 5-15 mg/dL above fasting 3-Hr = fasting level or below Lipids Phospholipids Most abundant lipid Amphipathic: polar (hydrophilic head) and nonpolar (hydrophobic side chain) Sphingomyelin Reference material during 3rd trimester of pregnancy Concentration is constant as opposed to lecithin Not derived from glycerol but from sphingosine (amino alcohol) Forms of phospholipids 70% Lecithin/Phosphatidyl choline 20% Sphingomyelin 10% Cephalin TLC + Densitometric Method for L/S ratio quantitation Microviscosity Measured by fluorescence polarization Cholesterol Not a source of fuel Not affected by fasting 70% Cholesterol ester (plasma/serum) 30% Free cholesterol (plasma/serum and RBC) LCAT Esterification of cholesterol Apo A-1 Activator of LCAT Cholesterol increases after 2 mg/dL/year between 50 and 60 years old the age of 50 Liebermann Burchardt Cholestadienyl Monosulfonic acid Green end color Salkowski Cholestadienyl Disulfonic acid Red end color Color developer mixture Glacial acetic acid (Cholesterol) Acetic anhydride Conc. H2SO4 One-step method Colorimetry (Pearson, Stern and Mac Gavack) Two-step method Color. + Extraction (Bloor’s) Three-step method Color. + Extract. + Saponification (Abell-Kendall) Four-step method Color. +Extract. + Sapon. + Precipitation (Schaenheimer Sperry, Parekh and Jung) Abell, Levy and Brodie mtd CDC reference method for cholesterol: (Chemical method) -Hydrolysis/saponification (Alc. KOH) -Hexane extraction -Colorimetry (Liebermann-Burchardt) Triglycerides Most insoluble lipid Main storage lipid in man (adipose tissue) – 95% Fasting: 12 hours Triglyceride increases after 2 mg/dL/year between 50 and 60 years old the age of 50 Van Handel & Zilversmith Chromotropic acid (Colorimetric) (+) Blue color compound Hantzsch Condensation Diacetyl acetone (Fluorometric) (+) Diacetyl lutidine compound Modified Van Handel and CDC reference method for triglycerides: Zilversmith -Alkaline hydrolysis (Chemical method) -Chloroform extraction  extract treated w/ silicic acid -Color reaction w/ chromotropic acid – meas. HCHO lec.mt 04 |Page | 17
  • 18. (+) Pink colored Fatty acids Short chain = 4-6 C atoms Medium chain = 8-12 C atoms Long chain = >12 C atoms Saturated = w/o double bonds Unsaturated = w/ double bonds Substrate for gluconeogenesis Most is bound to albumin Palmitic acid 16:0 Stearic acid 18:0 Oleic acid 18:1 Linoleic acid 18:2 Arachidonic acid 20:4 Lipoprotein lipase Hydrolyzes TAG in lipoproteins, releasing fatty acid and glycerol (Lipemia clearing factor) Hepatic lipase Hydrolyzes TAG and phospholipids from HDL Hydrolyzes lipids on VLDL and IDL Endothelial lipase Hydrolyzes phospholipids and TAG in HDL Apolipoprotein Protein component of lipoprotein Amphipathic helix – ability of proteins to bind to lipids Chylomicrons Largest and least dense Produced by the intestine SG: <0.95 80-95% TAG (exogenous) Apo B-48 (Major) EP: Origin VLDL Secreted by the liver SG: 0.95-1.006 65% TAG (endogenous) Apo B-100 (Major) EP: pre-beta LDL Synthesized by the liver SG: 1.006-1.063 50% CE Apo B-100 (Major) EP: beta Cholesterol transport: LiverTissues Target of cholesterol lowering therapy Better marker for CHD risk HDL Smallest but dense SG: 1.063-1.21 45-55% protein 26-32% phospholipid Apo A-1 (Major) EP: alpha Produced by the liver and intestine Reverse cholesterol transport: TissueLiver IDL Product of VLDL catabolism Seen in Type 3 hyperlipoproteinemia (Apo E-III def.; beta-VLDL) SG: 1.006-1.019 Lp(a) Sinking pre-beta lipoprotein SG: 1.045-1.080 lec.mt 04 |Page | 18
  • 19. Apo B-100 EP: pre-beta (VLDL) UC: like LDL Independent risk factor for atherosclerosis LpX Found in obstructive jaundice (cholestasis) and LCAT deficiency 90% FC and PL Apo C and albumin Beta-VLDL Floating beta-lipoprotein SG: <1.006 EP: beta (LDL) UC: like VLDL Found in type 3 hyperlipoproteinemia (Apo E-III def; IDL) Rich in cholesterol content than VLDL Lipoprotein methodologies Specimen: sample from serum separator tubes (preferred) EDTA plasma: choice for research studies of LPP fractions Fasting state: TAG  VLDL Nonfasting state: TAG  CM Ultracentrifugation Reference method for LPP quantitation Reagent: Potassium bromide (SG: 1.063) Ultracentrifugation of plasma for 24 hours Expressed in Svedberg units Electrophoresis Electrophoretic pattern: (+) HDL VLDL  LDL  CM (Origin) (-) Agarose gel: sensitive medium VLDL: migrates w/ alpha2-globulin (pre-beta) Chemical precipitation Uses polyanions (heparin and divalent cations) and polyethylene glycol Dextran sulfate-Mg2+ Heparin-Mn2+ 3-step procedure: CDC Reference method for HDL Ultracentrifugation Precipitation Abell-Kendall assay Beta quantification + Method for LDL Ultracentrifugation + Sample: EDTA plasma Chemical precipitation Immunoturbidimetric assay Measures Lipoprotein (a) LDL Cholesterol Total Cholesterol – HDL – VLDL Friedewald method Most commonly used VLDL = TAG/2.175 (mmol/L) VLDL = TAG/5 (mg/dL) Not applicable if TAG is >400 mg/dL De Long method VLDL = TAG/2.825 (mmol/L) VDL = TAG/6.5 (mg/dL) Apo A-1 Activates LCAT Apo B-100 LDL  LDL receptor Apo B-48 CM (major) Not recognized by LDL receptor Apo C-II Activates LPL Apo D Activates LCAT Apo E Apo E-4: associated w/ high LDL, higher risk of CHD and Alzheimer’s disease Apo(a) Lp(a) Homologous to plasminogen lec.mt 04 |Page | 19
  • 20. Abetalipoproteinemia Autosomal recessive (Basses-Kornzweig syn.) Defective apo B synthesis Deficient fat soluble vitamins Niemann-Pick disease Sphingomyelinase deficiency Tangier’s disease Deficiency of HDL (1-2 mg/dL) Defects in the gene for the ABCA1 transporter LPL deficiency TAG = 10,000 mg/dL (Chylomicronemia) Do not develop premature coronary disease (CM are not atherogenic) Abdominal pain and pancreatitis LCAT deficiency Fish-eye disease Low HDL Tay-Sachs disease Hexosaminidase A deficiency Fredrickson Classification Type 1 LPL deficiency (Chylomicronemia) Increased: CM (TAG) Type 2a Familial hypercholesterolemia Increased: LDL (cholesterol) Type 2b Combined hyperlipidemia (most common primary hyperlipidemia) Increased: LDL (cholesterol), VLDL (TAG) Type 3 Dysbetalipoproteinemia Increased: IDL, (+) beta-VLDL (+) Apo E-II (+) Eruptive and palmar xanthomas Type 4 Hypertriglyceridemia Increased: VLDL (TAG) Type 5 Increased: VLDL (Endo.TAG), CM (Exo.TAG) Normal Values Cholesterol: (Lipids) Desirable = <200 mg/dL Borderline high = 200-239 mg/dL High = >240 mg/dL Triglycerides: Desirable = <150 mg/dL Borderline high = 150-199 mg/dL High = 200-499 Very high = >500 mg/dL HDL: Low = <40 mg/dL (Cutoff) High = >60 mg/dL LDL: Optimal = <100 mg/dL Near/above optimal = 100-129 mg/dL Borderline high = 130-159 mg/dL High = 160-189 mg/dL Very high = >190 mg/dL Proteins Proteis First rank of importance Proteins Amphoteric: positive and negative charges Effective blood buffers Synthesized by the liver except immunoglobulins (plasma cells) Provide 12-20% of total daily body energy requirement Composed of 50-70% of the cell’s dry weight lec.mt 04 |Page | 20
  • 21. Primary structure Amino acid sequence Det. the identity of protein, molecular structure, function binding capacity, recognition ability Secondary structure Winding of polypeptide chain Specific 3-D conformations: alpha-helix, beta-pleated sheath, bend form Tertiary structure Actual 3-D configuration Folding pattern Physical and chemical properties of proteins Quarternary structure Association of 2 or more polypeptide chains  protein Albumin No quarternary structure Glucogenic amino acids Alanine (pyruvate) Arginine (alpha-ketoglutarate) Aspartate (oxaloacetate) Ketogenic amino acids Degraded to acetyl-CoA Leucine Lysine Simple proteins Hydrolysis  Amino acids Fibrous: fibrinogen, troponins, collagen Globular: hemoglobin, plasma proteins, enzymes, peptide hormones Conjugated proteins Protein (apoprotein) + nonprotein moiety (prosthetic group) Metalloproteins: ferritin, ceruloplasmin, hemoglobin, flavoproteins Lipoproteins: VLDL, HDL, LDL, CM Glycoproteins: haptoglobin, alpha1-antitrypsin (10-40% CHO) Mucoproteins or proteoglycans: Mucin (CHO > CHON) Nucleoproteins: Chromatin (combined w/ nucleic acids) Nitrogen balance Balance bet. anabolism and catabolism Negative nitrogen balance Catabolism > anabolism Excessive tissue destruction Positive nitrogen balance Anabolism > catabolism Growth and repair processes Prealbumin (Transthyretin) Transports thyroxine and retinol (Vit. A) Landmark to confirm that the specimen is really CSF Albumin Maintains osmotic pressure Negative acute phase reactant Alpha1-antitrypsin Acute phase reactant Major inhibitor of protease activity 90% of alpha1-globulin band Alpha1-fetoprotein Gestational marker Tumor marker: hepatic and gonodal cancers Screening test for fetal conditions (Spx: maternal serum) Amniotic fluid: confirmatory test Increased: Hepatoma, spina bifida, neural tube defects Decreased: Down Syndrome (Trisomy 21) Alpha1-acid glycoprotein/ Low pI (2.7) orosomucoid Negatively charged even in acid solution Alpha1-antichymotrypsin Acute phase reactant Binds and inactivates PSA Increased: Alzheimer’s disease, AMI, infection, malignancy, burns Haptoglobin (alpha2) Acute phase reactant Binds free hemoglobin (alpha chain) Ceruloplasmin (alpha2) Copper binding (6-8 atoms of copper are attached to it) Has enzymatic activities lec.mt 04 |Page | 21
  • 22. Decreased: Wilson’s disease (copper  skin, liver, brain, cornea [Kayser- Fleisher rings]) Alpha2-macroglobulin Larges major nonimmunoglobulin protein Increased: Nephrotic syndrome (10x) Forms a complex w/ PSA Group-specific component Affinity w/ vitamin D and actin (Gc)-globulin (bet. alpha1 and alpha2) Hemopexin (beta) Binds free heme Beta2-microglobulin HLA Filtered by glomeruli but reabsorbed Transferrin/Siderophilin Negative acute phase reactant (beta) Major component of beta2-globulin fraction Pseudoparaproteinemia in severe IDA Increased: Hemochromatosis (bronze-skin), IDA Complement (beta) C3: major Fibrinogen (bet. beta and Acute phase reactant gamma) Between beta and gamma globulins CRP (gamma) General scavenger molecule Undetectable in healthy individuals hsCRP: warning test to persons at risk of CAD Immunoglobulins (gamma) Synthesized by the plasma cells IgG>IgA>IgM>IgD>IgE Myoglobin Marker: Ischemic muscle cells, chest pain (angina), AMI Troponins Most important marker for AMI TnT (Tropomyosin-binding Specific for heart muscle subunit) Det. unstable angina (angina at rest) TnI (Inhibitory subunit or Only found in the myocardium Actin-binding unit) Greater cardiac specificity than TnT Highly specific for AMI 13x more abundant in the myocardium than CK-MB Very sensitive indicator of even minor amount of cardiac necrosis TnC Binds calcium ions and regulate muscle contractions Glomerular proteinuria Most common and serious type Often called albuminuria Tubular proteinuria Defective reabsorption Slightly increased albumin excretion Overload proteinuria Hemoglobinuria Myoglobinuria Bence-Jones proteinuria Postrenal proteinuria Urinary tract infection, bleeding, malignancy Microalbuminuria Type 1 DM Albumin excretion ≥30 mg/g creatinine (cutoff: DM) but ≤300 mg/g creatinine Microalbuminuria: 2 out of 3 specimens submitted are w/ abnormal findings (w/in 6 months) CSF Oligoclonal banding 2 or more IgG bands in the gamma region: Multiple sclerosis Encephalitis Neurosyphilis Guillain-Barre syndrome Neoplastic disorders lec.mt 04 |Page | 22
  • 23. Serum Oligoclonal banding Leukemia Lymphoma Viral infections Alkaptonuria Ochronosis (tissue pigmentation) Homocystinuria Impaired activity of cystathione beta-synthetase Elevated homocysteine and methionine in blood and urine Screen: Modified Guthrie test (Antagonist: L-methionine sulfoximine) MSUD Markedly reduced or absence of alpha-ketoacid decarboxylase 4 mg/dL of leucine is indicative of MSUD Screen: Modified Guthrie test (Antagonist: 4-azaleucine) Diagnostic: Amino acid analysis (HPLC) PKU Deficiency of tetrahydrobiopterin (BH4)  elevated blood phenylalanine Normal Values Total protein = 6.5-8.3 g/dL (Proteins) Albumin = 3.5-5.0 g/dL Globulin = 2.3-3.5 g/dL Kidney Function Tests Tests for GFR Clearance: -Inulin clearance -Creatinine clearance -Urea clearance Phenolsulfonphthalein dye test Cystatin C Tests for Renal Blood Flow BUN Creatinine Uric acid Tests Measuring Tubular Excretion: Function -Para-amino hippurate test (Diodrast test) -Phenolsulfonphthalein dye test Concentration: -Specific gravity -Osmolality GFR Decreases by 1.0 mL/min/year after age 20-30 years 150 L of glomerular filtrate is produced daily Inulin clearance Reference method Creatinine clearance Best alternative method Measure of the completeness of a 24-hour urine collection Excretion: 1.2-1.5 g creatinine/day Urea clearance Demonstrate progression of renal disease or response to therapy Cystatin C Low MW protease inhibitor FilteredNot secretedCompletely reabsorbed (PCT) Indirect estimates of GFR Its presence in urine denotes damage to PCT BUN Synthesized from Ornithine or Kreb’s Henseleit cycle First metabolite to elevate in kidney diseases Better indicator of nitrogen intake and state of hydration 2.14 BUN  Urea (mg/dL) Fluoride or citrate Inhibit urease Thiosemicarbazide Enhance color development (BUN mtd) Ferric ions Diacetyl monoxime method Yellow diazine derivative Urease method Routinely used Urease: prepared from jack beans lec.mt 04 |Page | 23
  • 24. Urea ---(Urease)--> NH4 + Berthelot reagent (Measure ammonia) Coupled urease Glutamate dehydrogenase method UV enzymatic method Isotope dilution mass Reference method spectrometry For research purposes NPN 45% Urea 20% Amino acid 20% Uric acid 5% Creatinine 1-2% Creatine 0.2% Ammonia Creatinine Derived from alpha-methyl guanidoacetic acid (creatine) Produced by 3 amino acids (methionine, arginine, lysine) Most commonly used to monitor renal function Enzymatic methods Creatinine Aminohydrolase – CK method (Creatinine) Creatinase-Hydrogen Peroxide method – benzoquinonemine dye (red) Creatininase (a.k.a. creatinine aminohydrolase) Direct Jaffe method Formation of red tautomer of creatinine picrate Interferences (Direct Jaffe) Falsely increased: Ascorbate Glucose Uric acid Alpha-keto acids Folin Wu Method (+) Red orange tautomer Lloyd’s or Fuller’s Earth True measure of creatinine method Sensitive and specific Uses adsorbent to remove interferences (UA, Hgb, Bili) Lloyd’s reagent Sodium aluminum silicate Fuller’s earth reagent Aluminum magnesium silicate Jaffe reagent (Alk. picrate) Satd. picric acid + 10% NaOH Kinetic Jaffe method Popular, inexpensive, rapid and easy to perform Requires automated equipment Azotemia Elevated urea and creatinine in blood Pre-renal azotemia Decreased GFR but normal renal function Dehydration, shock, CHF Increased: BUN Normal: Creatinine Renal azotemia True renal disease Decreased GFR Striking BUN level but slowly rising creatinine value BUN = >100 mg/dL Creatinine = >20 mg/dL Uric acid = >12 mg/dL Post renal azotemia Urinary tract obstruction Decreased GFR Nephrolithiasis, cancer or tumors of GUT Creatinine = normal or slightly increased Uremia Marked elevation of urea, accompanied by acidemia and electrolyte imbalance (K+ elevation) of renal failure Normocytic, normochromic anemia Uremic frost (dirty skin) Edema lec.mt 04 |Page | 24
  • 25. Foul breath Urine-like sweat Uric acid From purine (adenine and guanine) catabolism Excretion: 1g/day Hyperuricemia -Gout -Increased nuclear metabolism (leukemia, lymphoma, MM, polycythemia, hemolytic and megaloblastic anemia) – Tx: Allopurinol -Chronic renal disease -Lesch-Nyhan syndrome (HGPRT deficiency) Hypouricemia Fanconi’s syndrome Wilson’s disease Hodgkin’s disease Methods (Uric acid) Stable for 3 days Potassium oxalate cannot be used Major interferences: Ascorbate and bilirubin Phosphotungstic acid mtd Uric acid + Phosphotungstic acid ---(NaCN/NaCO3)--> Tungsten blue + Allantoin NaCN Folin Newton Brown Benedict NaCO3 Archibald Henry Caraway Lagphase Incubation period after the addition of an alkali to inactivate non-uric acid reactants Uricase method Simplest and most specific method Candidate reference method Uric acid (Absorbance at 293nm) ---[Uricase]--> Allantoin (No absorbance) Decrease in absorbance α uric acid concentration Para-amino hippurate test Measures renal plasma flow Reference method for tubular function Phenolsulfonphthalein dye Measures excretion of dye proportional to renal tubular mass test 6 mg of PSP is administered IV Concentration tests Collecting tubules and loops of Henle Specimen: 1st morning urine Specific gravity Affected by solute number and mass SG >1.050: X-ray dye and mannitol 1.010 = SG of ultrafiltrate in Bowman’s space Osmolality Total number solute particles present/kg of solvent (moles/kg solvent) Affectted only by number of solutes present Urine osmolality = due to urea Serum osmolality = due to sodium and chloride Det. by Colligative properties: Freezing point (incr. osm. = decr. FP) Vapor pressure (incr. osm. = decr. VP) Osmotic pressure (incr. osm. = incr. OP) Boiling point (incr. osm. = incr. BP) Direct methods Freezing point osmometry = popular method (Osmolality) Vapor pressure osmometry (Seebeck effect) Incr. plasma osmolality Incr. vasopressin (H2O reabsorption)  decr. plasma osmolality Tubular failure Increased: BUN, creatinine, calcium Decreased: Phosphate lec.mt 04 |Page | 25
  • 26. Osmolal gap Difference between measured and calculated osmolality Sensitive indicator of alcohol or drug overdose Osmolal gap: >12 mOsm/kg DKA Drug overdose Renal failure Normal Values Creatinine Clearance: (Kidney Function Tests) Male = 85-125 mL/min Female = 75-112 mL/min BUN = 8-23 mg/dL Creatinine = 0.5-1.5 mg/dL Uric acid: Male = 3.5-7.2 mg/dL Female = 2.6-6.0 mg/dL Renal plasma flow (PAH) = 600-700 mL/min Renal blood flow (PSP) = 1200 mL/min SG = 1.005-1.030 Osmolality: Serum = 275-295 mOsm/kg Urine (24-hr) = 300-900 mOsm/kg [<290 mOsm/kg = kidney damage] Urine osmolality: Serum osmolality = 1:1 to 3:1 [>1:1 = Glomerular disease] [1.2:1 = loss of renal concentrating ability] [<1:1 = Diabetes Insipidus] Liver Function Tests Liver Receives 15 mL of blood per minute Lobule: anatomic unit Synthetic function Proteins, CHO, lipids, LPP, clotting factors, ketone bodies, enzymes Albumin: 12g/day Conjugation function Bilirubin metabolism Bilirubin: 200mg/day Detoxification and Drug Drugs metabolism Ammonia  Urea  Excreted Excretory and Secretory Bile acids: cholic acid and chenodeoxycholic acid functions Bile salts: bile acids + amino acids (glycine and taurine) Storage function Vitamins Glycogen Test measuring the Hepatic Total Protein Determination: Synthetic Ability -Kjeldahl method -Biuret method -Folin-Ciocalteu (Lowry) method -UV absorption method -Electrophoresis -Refractometry -Turbidimetric and Nephelometric methods -Salt fractionation Prothrombin Time (Vitamin K Response Test) Test measuring Bilirubin Assay: Conjugation/Excretion -Evelyn and Malloy method Function -Jendrassik and Grof Bromsulfonphthalein (BSP) Dye Excretion test lec.mt 04 |Page | 26
  • 27. Test for Detoxification Enzyme tests: ALP, AST, ALT, 5’NT, GGT, OCT, LAP, LDH Function Ammonia: -Kjeldahl (Digestion) method -Nesslerization reaction -Berthelot reaction Plasma protein 0.2-0.4 g/dL higher than serum due to fibrinogen Kjeldahl (Digestion) mtd Standard reference method Measurement of nitrogen content Serum + Tungstic acid  PFF 1g N2 = 6.54g protein 15.1-16.8% = N2 content of proteins Rgt: H2SO4 End product: NH3 Biuret method Most widely used method (IFCC recommended) Req. at least 2 peptide bonds and an alkaline medium Rgts: Alkaline CuSO4 Rochelle salt (NaK Tartrate) NaOH KI End product: Violet color (545nm) Folin-Ciocalteu (Lowry) Highest analytical sensitivity method Oxidation of phenolic compounds (tyrosine, tryptophan, histidine) Rgts: Phenol (or phosphotungstic-molybdic acid) Biuret (color enhancer) End product: Blue color Electrophoresis MI: elevated APRs (AAT, HPG, a1-x) Gamma-spike Monoclonal gammopathy (multiple myeloma) Beta-gamma bridging In serum: Hepatic cirrhosis (IgA) In plasma: normal (fibrinogen) Alpha2-globulin band spike Nephrotic syndrome Alpha1-globulin flat curve Juvenile cirrhosis (AAT deficiency) Alpha1, alpha2, beta- Inflammation globulin band spikes Polyclonal gammopathy Chronic inflammation (RA, malignancy) Small spikes in beta region IDA (transferrin) Free hemoglobin “Blip” in the late alpha2 or early beta region Refractometry Refractive index Turbidimetric and SSA nephelometric methods TCA Salt fractionation Salt: Sodium sulfate Albumin Soluble: Water Moderately concentrated salt solution Concentrated salt solution Insoluble: Hydrocarbon solvents Highly concentrated salt solution Saturated salt solution lec.mt 04 |Page | 27
  • 28. Globulin Soluble: Hydrocarbon solvents Weak salt solution Insoluble: Water Saturated salt solution Concentrated salt solution Prothrombin time Differentiates intrahepatic disorder (prolonged PT) from extrahepatic obstructive liver disease (normal PT) Albumin Inversely proportional to the severity of the liver disease Hepatic cirrhosis Low total protein + low albumin Bromcresol green Most commonly used dye for albumin Bromcresol purple Most specific dye for albumin Other dyes for albumin Hydroxyazobenzene benzoic acid (HABA) Methyl orange (MO) Nephrotic syndrome Albumin excretion: 20-30 g/day Analbuminemia (-) albumin Bisalbuminemia EP: 2 albumin bands Therapeutic drugs in serum Inverted A/G ratio Hepatic cirrhosis (IgA) Multiple Myeloma (IgG) Waldenström’s macroglobulinemia (IgM) Chronic inflammation Bilirubin Derived from hemoglobin myoglobin, catalase and cytochrome oxidase Heme oxygenase Protoporphyrin  Biliverdin Biliverdin reductase Biliverdin B1 Urobilinogen Deconjugated bilirubin Bilirubin 1 Non-polar bilirubin Free/Slow bilirubin Bilirubin 2 Polar bilirubin One-minute/prompt bilirubin Regurgitative bilirubin Delta bilirubin Bilirubin tightly bound to albumin Delta bilirubin = TB-DB+IB Jaundice Bilirubin >2 or 3 mg/dL Pre-hepatic jaundice Hemolytic B1 = increased B2 = normal UG = increased UB = negative Hepatic jaundice Hepatocellular B1 = increased B2 = increased UG = increased UB = positive ALT = increased AST = increased Post-hepatic jaundice Obstructive B1 = normal B2 = increased UG = decreased/negative UB = positive lec.mt 04 |Page | 28
  • 29. ALP = increased GGT = increased Cholesterol = increased Gilbert’s syndrome Bilirubin transport deficit (uptake) B1 = increased B2 = decreased Crigler-Najjar syndrome Conjugation deficit Type I = total UDPGT deficiency Type II = partial UDPGT deficiency B1 = increased B2 = decreased Danger: Kernicterus Bile is colorless Dubin-Johnson syndrome & Bilirubin excretion deficit Rotor syndrome Blockade of excretion into the canaliculi TB = increased B2 = increased Lucey-Driscoll syndrome Circulating inhibitor of bilirubin conjugation B1 = increased Methods (Bilirubin) Free from hemolysis and lipemia Store in the dark Measured ASAP or w/in 2-3 hours Van den Berg reaction Diazotization of bilirubin Evelyn and Malloy method Accelerator: Methanol Diazo rgts: Diazo A (0.1% Sulfanilic acid + HCl) Diazo B (0.5% Sodium nitrite) Diazo blank (1.5% HCl) (+) pink to purple azobilirubin Affected by hemolysis Jendrassik and Grof Candidate reference method Accelerator: Caffeine sodium benzoate Buffer: Sodium acetate Ascorbic acid: terminates the initial reaction and destroys the excess diazo rgt Not falsely elevated by hemolysis Total bilirubin is measured 15 minutes after adding methanol or caffeine soln Bilirubin Absorbs light maximally at 450nm Rosenthal White method Double collection method Collection: -After 5 mins (50% dye retention) -After 30 mins (0% dye retention) Mac Donald method Single collection method Collection: -After 45 mins (+/- 5% dye retention) Ammonia From deamination of amino acids Elevated levels are neurotoxic and often associated w/ encephalopathy and acetaminophen poisoning Diagnosis of hepatic failure and Reye’s syndrome In severe liver disorder: NH3  circulation  brain (conv. to glutamine)  increases pH  compromise the Kreb’s cycle  Coma due to lack of ATP for the brain lec.mt 04 |Page | 29
  • 30. Methods (Ammonia) Specimen: Heparin or EDTA plasma Fasting is required Avoid smoking Prolonged standing of specimen: increased NH3 due to deamination Place on iced water immediately Avoid hemolysis Kjeldahl (Digestion) Specimen  PFF method N2 ----------(hot conc. H2SO4 + CuSO4 + Hg + Selenium)----------> NH3 Nesslerization of ammonia NH3 + K2Hg2I2 ----------(Gum Ghatti)----------> NH2Hg2I2 End color: Yellow (low to moderate N2) Orange brown (high N2) Berthelot reaction NH3 + Phenol + Hypochlorite -----(Na Nitroprusside)-----> Indophenol blue Normal Values Total protein = 6.5-8.3 g/dL (Liver Function Tests) Albumin = 3.5-5.0 g/dL Globulin = 2.3-3.5 g/dL α1-globulin = 0.1-0.3 g/dL α2-globulin = 0.6-1.0 g/dL β-globulin = 0.7-1.1 g/dL γ-globulin = 0.8-1.6 g/dL Total bilirubin = 0.2-1.0 mg/dL Indirect bilirubin = 0.2-0.8 mg/dL Direct bilirubin = 0-0.2 mg/dL Urobilinogen: Urine = 0.1-1.0 Ehrlich units/2hrs (or 0.54 Ehrlich units/day) Stool = 75-275 Ehrlich units/100g feces (or 75-400 Ehrlich units/24hrs) Ammonia = 19-60 μg/dL Enzymes Enzyme concentration Serum  Enzyme concentration =  reaction rate Substrate concentration Reagent If enzyme > substrate,  substrate =  reaction rate Saturation kinetics When substrate concentration reaches a maximal value, higher concentration of substrate no longer results in increased rate of reaction Cofactors Nonprotein entities Coenzymes Organic compound Ex. NADP  Coenzyme =  Velocity Activators Inorganic ions Alters spatial configuration of the enzyme for proper substrate binding Ex. Ca2+ (#1 activator), Zn2+ (LDH), Cl- (AMS), Mg2+ (CK, ALP) Metalloenzymes Inorganic ion attached to a molecule Ex. Catalase, cytochrome oxidase Inhibitors Interferes with the enzymatic reactions Competitive inhibitor Binds to the active site of an enzyme Reversible (Substrate > Inhibitor) Noncompetitive inhibitor Binds to the allosteric site (cofactor site) Irreversible Uncompetitive inhibitor Binds to the enzyme-substrate complex  Substrate = ES = Inhibition Isoenzymes Same catalytic reactions but slightly different molecular structures Fractionation of isoenzymes lec.mt 04 |Page | 30
  • 31. Temperature 37’C = optimum temperature for enzyme activity Temperature = Reaction rate (movement of molecules) 40-50’C Denaturation of enzymes 60-65’C Inactivation of enzymes Temperature coefficient For every 10OC increase in temperature, there will be a two-fold increase in (Q10) enzyme activity pH Most physiologic reactions occur in the pH range of 7-8 Storage Enzymes: -20’C = for longer period of time Substrate and Coenzymes: 2-8’C LDH (LD4 & 5): Room temperature Hemolysis Mostly increases enzyme concentration Lactescence or milky Decreases enzyme concentration specimen Enzyme nomenclature 1st digit: classification 2nd and 3rd digits: subclass 4th digit(s): serial number Enzyme classification “OTHLIL” Oxidoreductases Transferases Hydrolases Lyases Isomerases Ligases Oxidoreductases Redox reaction Dehydrogenases: -Cytochrome oxidase -LDH -MDH -Isocitrate dehydrogenase -G-6-PD Transferases Transfer of a chemical group other than hydrogen from 1 substrate to another Kinases, Transaminases, Aminotransferases: -CK -GGT -AST -ALT -OCT Hydrolases Hydrolysis/splitting by addition of water Esterases: -ACP -ALP -CHS -LPS Peptidases: -Trypsin -Pepsin -LAP Glycosidases: -AMS -Galactosidases Lyases Removal of groups w/o hydrolysis (product contains double bonds) Aldolase lec.mt 04 |Page | 31
  • 32. Decarboxylases: -Glutamate decarboxylase -Pyruvate decarboxylase -Tryptophan decarboxylase Isomerases Intramolecular arrangements Glucose phosphate isomerase Ribose phosphate isomerase Ligases Joining of 2 substrate molecules Synthases Active site Water-free cavity Where the substrate interacts Allosteric site Cavity other than the active site May bind regulatory molecules Prosthetic group Coenzyme that is bound tightly to the enzyme Holoenzyme Apoenzyme + Prosthetic group Zymogen/proenzyme Inactive form of enzyme Emil Fisher’s/Lock and Key Shape of the key (substrate) must fit into the lock (enzyme) theory Kochland’s/Induced fit Based on the substrate binding to the active site of the enzyme theory Acceptable theory Enzyme kinetics Enzymes catalyze reactions by lowering the activation energy level that the substrate must reach for the reaction to occur Absolute specificity Enzyme combines w/ only 1 substrate and catalyzes only 1 reaction Group specificity Enzymes combine w/ all the substrates in a chemical group Bond specificity Enzymes reacting w/ specific chemical bonds Zero-order reaction Reaction rate depends only on enzyme concentration Independent on substrate concentration First-order reaction Reaction rate is directly proportional to substrate concentration Independent on enzyme concentration Measurement of enzyme Change in substrate concentration activity Change in product concentration Change in coenzyme concentration International Unit 1 micromole of substrate/minute Katal Unit 1 mole of substrate/second Nonkinetic assay Absorbance is made at 10-second intervals for 100 seconds Alkaline Phosphatase pH = 10.5 405nm Electrophoresis: (+) Liver  Bone (Regan)  Placenta  Intestine (-) Heat fractionation: (Δ Stable) Regan  Placenta  Intestine  Liver  Bone (Δ Labile) Phenylalanine Inhibits Regan, placental and intestinal ALP L-leucine Inhibits Nagao ALP Levamisole Inhibits liver and bone ALP 3M urea Inhibits bone ALP Methods (ALP) Low temperature = Increased ALP 1. Bowers and McComb (PNPP) – IFCC recommended 2. Bessy, Lowry and Brock (PNPP) 3. Bodansky, Shinowara, Jones, Reinhart = BGP (beta glycerophosphate) 4. King and Armstrong = PP (phenylphosphate) 5. Klein, Babson & Read = Buffered PPP (phenolphthalein phosphate) 6. Huggins and Talalay = PPDP (phenolphthalein diphosphate) lec.mt 04 |Page | 32
  • 33. 7. Moss = ANP (alpha naphthol phosphate) Increased ALP Sprue Hyperparathyroidism Rickets (children) and osteomalacia (adults) Acid Phosphatase pH = 5.5 405nm Sources: Prostate (major), RBC, platelets, bone Prostatic ACP Inhibited by L-tartrate ions RBC ACP Inhibited by cupric and formaldehyde ions Methods (ACP) Room temperature (1-2 hrs) = decreased ACP Thymolphthalein monophosphate = specific substrate, substrate of choice (endpoint) Alpha-naphthyl phosphate = preferred for continuous monitoring methods 1. Gutman and Gutman = PP 2. Shinowara = PNPP 3. Babsonm Read and Phillips = ANP (continuous monitoring) 4. Roy and Hillman = Thymolphthalein monophosphate (endpoint) Aspartate Aminotransferase pH 7.5 (AST/SGOT) 340nm Sources: Cardiac tissue > Liver > Skeletal muscle > Kidney, pancreas, RBCs Alanine Aminotransferase pH 7.5 (ALT/SGPT) 340nm Major Source: Liver Methods (AST and ALT) 1. Karmen method = Kinetic 2. Reitman and Frankel = Endpoint -Color developer: DNPH -Color intensifier: 0.4N NaOH Increased Transaminases DeRitis ratio (ALT:AST) >1.0 = Acute hepatitis (Highest) 20x = viral or toxic hepatitis Moderate elevation = chronic hepatitis, hepatic cancer, IM Slight elevation = Hepatic cirrhosis, alcoholic hepatitis, obstructive jaundice Amylase Smallest enzyme (appears in urine) Earliest pancreatic marker P3: most predominant pancreatic AMS isoenzyme in AP Isoenzymes: S-type (ptyalin): anodal P-type (amylopsin): cathodal Methods (AMS) Samples w/ high activity of AMS should be diluted w/ NaCl to prev. inactivation Salivary AMS = inhibited by wheat germ lectin Substrate: Starch Saccharogenic Reducing sugars produced Classic reference method (SU) Amyloclastic Degradation of starch Chromogenic Increase in color intensity Coupled-enzyme Continuous-monitoring technique Lipase Late marker (AP) Most specific pancreatic marker Methods (LPS) Substrate: Olive oil/Triolein 1. Cherry Crandal (Reference method) 2. Tietz and Fiereck 3. Peroxidase coupling (most commonly used method) Lactate dehydrogenase Lacks specificity lec.mt 04 |Page | 33