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THRIVETimely Health indicators using Remote sensing &
Innovation for the Vitality of the Environment
Prevention is better than cure
David.Lary@utdallas.edu
This is a BigData Problem of
Great Societal Relevance
• Collecting data in real time from national and
global networks requires bandwidth.
• With the next generation of wearable sensors and
the internet of things this data volume will
rapidly increase.
• A variety of applications enabled by BigData,
higher bandwidth and cloud processing.
• Future finer granularity and two way
communication will dramatically increase the size
of the data bringing air quality to the micro scale,
just like weather data.
Time Taken
10 Mbps 20 Mbps 50 Mbps 1 Gbps
40 TB training data
4 Gb update
185 days 93 days 37 days 1 day 21 hours
54m 27m 11m 32s
Think Big: Holistic & Comprehensive Informatics
Bio	
  Informa$cs
Medical	
  Informa$cs
Environmental	
  Informa$cs
THRIVE
Mul$ple	
  Big	
  Data	
  +	
  EMR	
  +	
  Social	
  Media	
  +	
  Machine	
  Learning	
  +	
  Causality
A	
  Cross-­‐cu>ng	
  Pla@orm	
  for	
  Comprehensive	
  Informa$cs	
  for	
  Data	
  Driven	
  Decisions	
  in	
  Pa4ent	
  
Centered	
  Care	
  facilitated	
  by	
  High	
  Speed	
  Low-­‐Latency	
  networks,	
  mul$ple	
  massive	
  datasets	
  from	
  
large	
  distributed	
  sensor	
  networks,	
  EMR,	
  and	
  local	
  cloud	
  compu:ng.
PM2.5 Invisible Killer
TypesofbiologicalMaterialTypesofDustTypesofParticulatesGasMolecules 0.0001 μm 0.001 μm 0.01 μm 0.1 μm 1 μm 10 μm 100 μm 1000 μm
Pollen
Mold Spores
House Dust Mite Allergens
Bacteria
Cat Allergens
Viruses
Heavy Dust
Settling Dust
Suspended Atmospheric Dust
Cement Dust
Fly Ash
Oil Smoke
Smog
Tobacco Smoke
Soot
Gas Molecules
Decreased Lung Function < 10 μm
Skin & Eye Disease < 2.5 μm
Tumors < 1 μm
Cardiovascular Disease < 0.1 μm
Hair
Pin
Cell
0.0001 μm 0.001 μm 0.01 μm 0.1 μm 1 μm 10 μm 100 μm 1000 μm
PM10 particles
PM2.5 particles
PM0.1 ultra fine particles PM10-2.5 coarse fraction
0.1 mm 1 mm
TypesofbiologicalMaterialTypesofDustTypesofParticulatesGasMolecules
0.0001 μm 0.001 μm 0.01 μm 0.1 μm 1 μm 10 μm 100 μm 1000 μm
Pollen
Mold Spores
House Dust Mite Allergens
Bacteria
Cat Allergens
Viruses
Heavy Dust
Settling Dust
Suspended Atmospheric Dust
Cement Dust
Fly Ash
Oil Smoke
Smog
Tobacco Smoke
Soot
Gas Molecules
Decreased Lung Function < 10 μm
Skin & Eye Disease < 2.5 μm
Tumors < 1 μm
Cardiovascular Disease < 0.1 μm
Hair
Pin
Cell
0.0001 μm 0.001 μm 0.01 μm 0.1 μm 1 μm 10 μm 100 μm 1000 μm
PM10 particles
PM2.5 particles
PM0.1 ultra fine particles PM10-2.5 coarse fraction
0.1 mm 1 mm
Table!1.!PM!and!health!outcomes!(modified!from!Ruckerl*et*al.!(2006)).!
!!
Health*Outcomes!
Short9term*Studies* Long9term*Studies*
PM10! PM2.5! UFP! PM10! PM2.5! UFP!
Mortality* !! !! !! !! !! !!
!!!!All!causes! xxx!! xxx!! x! xx! xx! x!
!!!!Cardiovascular! xxx! xxx! x!! xx! xx! x!
!!!!Pulmonary! xxx! xxx! x! xx! xx! x!
Pulmonary!effects! !! !! !! !! !! !!
!!!!Lung!function,!e.g.,!PEF! xxx! xxx! xx! xxx! xxx! !!
!!!!Lung!function!growth! !! !! !! xxx! xxx! !!
Asthma!and!COPD!exacerbation! !! !! !! !! !! !!
!!!!Acute!respiratory!symptoms! !! xx! x! xxx! xxx! !!
!!!!Medication!use! !! !! x! !! !! !!
!!!!Hospital!admission! xx! xxx! x! !! !! !!
Lung!cancer! !! !! !! !! !! !!
!!!!Cohort! !! !! !! xx! xx! x!
!!!!Hospital!admission! !! !! !! xx! xx! x!
Cardiovascular!effects! !! !! !! !! !! !!
!!!!Hospital!admission! xxx! xxx! !! x! x! !!
ECG@related!endpoints! !! !! !! !! !! !!
!!!!Autonomic!nervous!system! xxx! xxx! xx! !! !! !!
!!!!Myocardial!substrate!and!vulnerability! !! xx! x! !! !! !!
Vascular!function! !! !! !! !! !! !!
!!!!Blood!pressure! xx! xxx! x! !! !! !!
!!!!Endothelial!function! x! xx! x! !! !! !!
Blood!markers! !! !! !! !! !! !!
!!!!Pro!inflammatory!mediators! xx! xx! xx! !! !! !!
!!!!Coagulation!blood!markers! xx! xx! xx! !! !! !!
!!!!Diabetes! x! xx! x! !! !! !!
!!!!Endothelial!function! x! x! xx! !! !! !!
Reproduction! !! !! !! !! !! !!
!!!!Premature!birth! x! x! !! !! !! !!
!!!!Birth!weight! xx! x! !! !! !! !!
!!!!IUR/SGA! x! x! !! !! !! !!
Fetal!growth! !! !! !! !! !! !!
!!!!Birth!defects! x! !! !! !! !! !!
!!!!Infant!mortality! xx! x! !! !! !! !!
!!!!Sperm!quality! x! x! !! !! !! !!
Neurotoxic!effects! !! !! !! !! !! !!
!!!!Central!nervous!system!! !! x! xx! !! !! !!
x, few studies; xx, many studies; xxx, large number of studies.
Hourly Measurements from 55 countries and more than 8,000 measurement sites from 1997-present
Hourly Measurements from 55 countries and more than 8,000 measurement sites from 1997-present
Aqua DeepBlue
Rank Source Variable Type
1 Satellite Product Tropospheric NO2 Column Input
2 Satellite Product Solar Azimuth Input
3 Meteorological Analyses Air Density at Surface Input
4 Satellite Product Sensor Zenith Input
5 Satellite Product White-sky Albedo at 470 nm Input
6 Population Density Input
7 Satellite Product Deep Blue Surface Reflectance 470 nm Input
8 Meteorological Analyses Surface Air Temperature Input
9 Meteorological Analyses Surface Ventilation Velocity Input
10 Meteorological Analyses Surface Wind Speed Input
11 Satellite Product White-sky Albedo at 858 nm Input
12 Satellite Product White-sky Albedo at 2,130 nm Input
13 Satellite Product Solar Zenith Input
14 Meteorological Analyses Surface Layer Height Input
15 Satellite Product White-sky Albedo at 1,240 nm Input
16 Satellite Product Deep Blue Surface Reflectance 660 nm Input
17 Satellite Product Deep Blue Surface Reflectance 412 nm Input
18 Satellite Product White-sky Albedo at 1,640 nm Input
19 Satellite Product Sensor Azimuth Input
20 Satellite Product Scattering Angle Input
21 Meteorological Analyses Surface Velocity Scale Input
22 Satellite Product Cloud Mask Qa Input
23 Satellite Product White-sky Albedo at 555 nm Input
24 Satellite Product Deep Blue Aerosol Optical Depth 550 nm Input
25 Satellite Product Deep Blue Aerosol Optical Depth 660 nm Input
26 Satellite Product Deep Blue Aerosol Optical Depth 412 nm Input
27 Meteorological Analyses Total Precipitation Input
28 Satellite Product White-sky Albedo at 648 nm Input
29 Satellite Product Deep Blue Aerosol Optical Depth 470 nm Input
30 Satellite Product Deep Blue Angstrom Exponent Land Input
31 Meteorological Analyses Surface Specific Humidity Input
32 Satellite Product Cloud Fraction Land Input
In-situ Observation PM2.5 Target
Long-Term Average 1997-present
13
VA Decision Support Tools
More Than 40 Data Products from In-situ Observations, NASA Earth Observations, Earth System
Models, Population Density & Emission Inventories
Personalized Alerts Dr. Watson
Staffing & Resource
Management
Machine Learning
Daily Global Air
Quality Estimates
NASA Earth
Observation Data
NASA Earth System
Model Products
Population Density and
Other Related Products
ER Admissions
All ICD Codes
All Prescriptions
Machine
Learning
Machine
Learning
THRIVE Medical
Environment Analytics
Engine
Satellite Observations Meteorological Analyses Population Density In-situ observationsSocial Media
Combined Using
Machine Learning
to Provide a
High-Resolution
Global Products
Combined with Electronic Health Records to provide:
1. Real time personal health alerts
2. Physician Decision Support Tools
3. Logistical Planning for Emergency Rooms
4. Improved Policy Decisions
Next Generation of High Speed Networks to Facilitate the
Next Generation of Proactive Smart Health Care Applications
Veteran’s Administration
Country’s Largest Health Care Provider
Requires ultra-low latency gigabit to the end user
Local cloud computing coupled with widely distributed national and global sensor networks
Multiple global high-resolution datasets
Prof. David Lary
Next Generation of High Speed Low latency Networks to Facilitate the
Next Generation of Smart Fire Detection & Water Conservation Applications
Requires ultra-low latency wireless gigabit for very-high resolution hyperspectral video imagery for real time flight control of aerial vehicles
11 drought-ridden western and central states have just
been declared as primary natural disaster areas seriously
threatening US food security. Further, every year between
$1 and $2 billion dollars are spent on fire suppression
costs alone.
A fleet of low cost aerial vehicles working together
autonomously utilizing uncompressed very-high
resolution hyperspectral video imagery.The geo-tagged
imagery is streamed using high-speed low-latency wireless
networks to communicate to a powerful cloud computing
cluster running machine learning and image processing
algorithms for real time direction of the optimal flight
patterns, and the delivery of early warning for timely
interventions.
Fire: Appropriate preemptive fire prevention can lead to
massive savings in fire control costs, loss of life, and
property damage.
Agriculture: Appropriate and timely early warning of
crop infestations, infections and/or water stress can Prof. David Lary
20 lb Airborne 385 channel
hyperspectral imaging system
Next Generation of High Speed Networks to Facilitate the
Next Generation of Smart Water Management Applications
With Drought Disaster Declarations in 11 western and central
states, smart water management is now more critical than ever
for sustainable water conservation and US Food Security.
Coupling high resolution remote sensing from satellites, with
machine learning, and the next generation of high speed low
latency networks is facilitating the next generation of smart
water management systems. These systems will benefit
individual home owners, farmers, corporate campuses, golf
courses, etc. and allow optimum monitoring and control of
irrigation using mobile devices.
Sports fields
blown valves lead to flooding
uneven irrigation
Prof. David Lary
Culex tarsalis
West Nile Virus
The same data infrastructure can also
be used to help combat West Nile Virus
by identifying breeding sites.
P. vivax is carried by the female Anopheles mosquito
Detecting Dust Sources
Detecting Dust Sources
South America: Bolivia and Chile
July 18, 2010 MODIS Terra True Color
Jan 1, 2006 True Color
Jan 1, 2006 NRL DEP
Sources along New Mexico/Texas border
The North American sources have a different
spectral signature than those we saw in SW Asia
Agricultural on high planes
Blue dessert areas

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Thrive:Timely Health Indicators Using Remote Sensing & innovation for the Vitality of the Enviroment

  • 1. THRIVETimely Health indicators using Remote sensing & Innovation for the Vitality of the Environment Prevention is better than cure David.Lary@utdallas.edu
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  • 3. This is a BigData Problem of Great Societal Relevance • Collecting data in real time from national and global networks requires bandwidth. • With the next generation of wearable sensors and the internet of things this data volume will rapidly increase. • A variety of applications enabled by BigData, higher bandwidth and cloud processing. • Future finer granularity and two way communication will dramatically increase the size of the data bringing air quality to the micro scale, just like weather data. Time Taken 10 Mbps 20 Mbps 50 Mbps 1 Gbps 40 TB training data 4 Gb update 185 days 93 days 37 days 1 day 21 hours 54m 27m 11m 32s
  • 4. Think Big: Holistic & Comprehensive Informatics Bio  Informa$cs Medical  Informa$cs Environmental  Informa$cs THRIVE Mul$ple  Big  Data  +  EMR  +  Social  Media  +  Machine  Learning  +  Causality A  Cross-­‐cu>ng  Pla@orm  for  Comprehensive  Informa$cs  for  Data  Driven  Decisions  in  Pa4ent   Centered  Care  facilitated  by  High  Speed  Low-­‐Latency  networks,  mul$ple  massive  datasets  from   large  distributed  sensor  networks,  EMR,  and  local  cloud  compu:ng.
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  • 8. TypesofbiologicalMaterialTypesofDustTypesofParticulatesGasMolecules 0.0001 μm 0.001 μm 0.01 μm 0.1 μm 1 μm 10 μm 100 μm 1000 μm Pollen Mold Spores House Dust Mite Allergens Bacteria Cat Allergens Viruses Heavy Dust Settling Dust Suspended Atmospheric Dust Cement Dust Fly Ash Oil Smoke Smog Tobacco Smoke Soot Gas Molecules Decreased Lung Function < 10 μm Skin & Eye Disease < 2.5 μm Tumors < 1 μm Cardiovascular Disease < 0.1 μm Hair Pin Cell 0.0001 μm 0.001 μm 0.01 μm 0.1 μm 1 μm 10 μm 100 μm 1000 μm PM10 particles PM2.5 particles PM0.1 ultra fine particles PM10-2.5 coarse fraction 0.1 mm 1 mm
  • 9. TypesofbiologicalMaterialTypesofDustTypesofParticulatesGasMolecules 0.0001 μm 0.001 μm 0.01 μm 0.1 μm 1 μm 10 μm 100 μm 1000 μm Pollen Mold Spores House Dust Mite Allergens Bacteria Cat Allergens Viruses Heavy Dust Settling Dust Suspended Atmospheric Dust Cement Dust Fly Ash Oil Smoke Smog Tobacco Smoke Soot Gas Molecules Decreased Lung Function < 10 μm Skin & Eye Disease < 2.5 μm Tumors < 1 μm Cardiovascular Disease < 0.1 μm Hair Pin Cell 0.0001 μm 0.001 μm 0.01 μm 0.1 μm 1 μm 10 μm 100 μm 1000 μm PM10 particles PM2.5 particles PM0.1 ultra fine particles PM10-2.5 coarse fraction 0.1 mm 1 mm Table!1.!PM!and!health!outcomes!(modified!from!Ruckerl*et*al.!(2006)).! !! Health*Outcomes! Short9term*Studies* Long9term*Studies* PM10! PM2.5! UFP! PM10! PM2.5! UFP! Mortality* !! !! !! !! !! !! !!!!All!causes! xxx!! xxx!! x! xx! xx! x! !!!!Cardiovascular! xxx! xxx! x!! xx! xx! x! !!!!Pulmonary! xxx! xxx! x! xx! xx! x! Pulmonary!effects! !! !! !! !! !! !! !!!!Lung!function,!e.g.,!PEF! xxx! xxx! xx! xxx! xxx! !! !!!!Lung!function!growth! !! !! !! xxx! xxx! !! Asthma!and!COPD!exacerbation! !! !! !! !! !! !! !!!!Acute!respiratory!symptoms! !! xx! x! xxx! xxx! !! !!!!Medication!use! !! !! x! !! !! !! !!!!Hospital!admission! xx! xxx! x! !! !! !! Lung!cancer! !! !! !! !! !! !! !!!!Cohort! !! !! !! xx! xx! x! !!!!Hospital!admission! !! !! !! xx! xx! x! Cardiovascular!effects! !! !! !! !! !! !! !!!!Hospital!admission! xxx! xxx! !! x! x! !! ECG@related!endpoints! !! !! !! !! !! !! !!!!Autonomic!nervous!system! xxx! xxx! xx! !! !! !! !!!!Myocardial!substrate!and!vulnerability! !! xx! x! !! !! !! Vascular!function! !! !! !! !! !! !! !!!!Blood!pressure! xx! xxx! x! !! !! !! !!!!Endothelial!function! x! xx! x! !! !! !! Blood!markers! !! !! !! !! !! !! !!!!Pro!inflammatory!mediators! xx! xx! xx! !! !! !! !!!!Coagulation!blood!markers! xx! xx! xx! !! !! !! !!!!Diabetes! x! xx! x! !! !! !! !!!!Endothelial!function! x! x! xx! !! !! !! Reproduction! !! !! !! !! !! !! !!!!Premature!birth! x! x! !! !! !! !! !!!!Birth!weight! xx! x! !! !! !! !! !!!!IUR/SGA! x! x! !! !! !! !! Fetal!growth! !! !! !! !! !! !! !!!!Birth!defects! x! !! !! !! !! !! !!!!Infant!mortality! xx! x! !! !! !! !! !!!!Sperm!quality! x! x! !! !! !! !! Neurotoxic!effects! !! !! !! !! !! !! !!!!Central!nervous!system!! !! x! xx! !! !! !! x, few studies; xx, many studies; xxx, large number of studies.
  • 10. Hourly Measurements from 55 countries and more than 8,000 measurement sites from 1997-present
  • 11. Hourly Measurements from 55 countries and more than 8,000 measurement sites from 1997-present
  • 12. Aqua DeepBlue Rank Source Variable Type 1 Satellite Product Tropospheric NO2 Column Input 2 Satellite Product Solar Azimuth Input 3 Meteorological Analyses Air Density at Surface Input 4 Satellite Product Sensor Zenith Input 5 Satellite Product White-sky Albedo at 470 nm Input 6 Population Density Input 7 Satellite Product Deep Blue Surface Reflectance 470 nm Input 8 Meteorological Analyses Surface Air Temperature Input 9 Meteorological Analyses Surface Ventilation Velocity Input 10 Meteorological Analyses Surface Wind Speed Input 11 Satellite Product White-sky Albedo at 858 nm Input 12 Satellite Product White-sky Albedo at 2,130 nm Input 13 Satellite Product Solar Zenith Input 14 Meteorological Analyses Surface Layer Height Input 15 Satellite Product White-sky Albedo at 1,240 nm Input 16 Satellite Product Deep Blue Surface Reflectance 660 nm Input 17 Satellite Product Deep Blue Surface Reflectance 412 nm Input 18 Satellite Product White-sky Albedo at 1,640 nm Input 19 Satellite Product Sensor Azimuth Input 20 Satellite Product Scattering Angle Input 21 Meteorological Analyses Surface Velocity Scale Input 22 Satellite Product Cloud Mask Qa Input 23 Satellite Product White-sky Albedo at 555 nm Input 24 Satellite Product Deep Blue Aerosol Optical Depth 550 nm Input 25 Satellite Product Deep Blue Aerosol Optical Depth 660 nm Input 26 Satellite Product Deep Blue Aerosol Optical Depth 412 nm Input 27 Meteorological Analyses Total Precipitation Input 28 Satellite Product White-sky Albedo at 648 nm Input 29 Satellite Product Deep Blue Aerosol Optical Depth 470 nm Input 30 Satellite Product Deep Blue Angstrom Exponent Land Input 31 Meteorological Analyses Surface Specific Humidity Input 32 Satellite Product Cloud Fraction Land Input In-situ Observation PM2.5 Target
  • 14. 13 VA Decision Support Tools More Than 40 Data Products from In-situ Observations, NASA Earth Observations, Earth System Models, Population Density & Emission Inventories Personalized Alerts Dr. Watson Staffing & Resource Management Machine Learning Daily Global Air Quality Estimates NASA Earth Observation Data NASA Earth System Model Products Population Density and Other Related Products ER Admissions All ICD Codes All Prescriptions Machine Learning Machine Learning THRIVE Medical Environment Analytics Engine
  • 15. Satellite Observations Meteorological Analyses Population Density In-situ observationsSocial Media Combined Using Machine Learning to Provide a High-Resolution Global Products Combined with Electronic Health Records to provide: 1. Real time personal health alerts 2. Physician Decision Support Tools 3. Logistical Planning for Emergency Rooms 4. Improved Policy Decisions Next Generation of High Speed Networks to Facilitate the Next Generation of Proactive Smart Health Care Applications Veteran’s Administration Country’s Largest Health Care Provider Requires ultra-low latency gigabit to the end user Local cloud computing coupled with widely distributed national and global sensor networks Multiple global high-resolution datasets Prof. David Lary
  • 16. Next Generation of High Speed Low latency Networks to Facilitate the Next Generation of Smart Fire Detection & Water Conservation Applications Requires ultra-low latency wireless gigabit for very-high resolution hyperspectral video imagery for real time flight control of aerial vehicles 11 drought-ridden western and central states have just been declared as primary natural disaster areas seriously threatening US food security. Further, every year between $1 and $2 billion dollars are spent on fire suppression costs alone. A fleet of low cost aerial vehicles working together autonomously utilizing uncompressed very-high resolution hyperspectral video imagery.The geo-tagged imagery is streamed using high-speed low-latency wireless networks to communicate to a powerful cloud computing cluster running machine learning and image processing algorithms for real time direction of the optimal flight patterns, and the delivery of early warning for timely interventions. Fire: Appropriate preemptive fire prevention can lead to massive savings in fire control costs, loss of life, and property damage. Agriculture: Appropriate and timely early warning of crop infestations, infections and/or water stress can Prof. David Lary 20 lb Airborne 385 channel hyperspectral imaging system
  • 17. Next Generation of High Speed Networks to Facilitate the Next Generation of Smart Water Management Applications With Drought Disaster Declarations in 11 western and central states, smart water management is now more critical than ever for sustainable water conservation and US Food Security. Coupling high resolution remote sensing from satellites, with machine learning, and the next generation of high speed low latency networks is facilitating the next generation of smart water management systems. These systems will benefit individual home owners, farmers, corporate campuses, golf courses, etc. and allow optimum monitoring and control of irrigation using mobile devices. Sports fields blown valves lead to flooding uneven irrigation Prof. David Lary
  • 18. Culex tarsalis West Nile Virus The same data infrastructure can also be used to help combat West Nile Virus by identifying breeding sites.
  • 19. P. vivax is carried by the female Anopheles mosquito
  • 22. South America: Bolivia and Chile July 18, 2010 MODIS Terra True Color
  • 23. Jan 1, 2006 True Color Jan 1, 2006 NRL DEP Sources along New Mexico/Texas border The North American sources have a different spectral signature than those we saw in SW Asia Agricultural on high planes Blue dessert areas