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GENETIC DISORDER,
MUTATIONS, CYTOGENETIC
DISORDERS
Dr Tamil Nila
Concepts
• Genetics is the study of genes
• 23 pairs of chromosomes
• 22 pairs – Autosomal
• One pair – sex chromosome
• 20000 – 30000 genes
• Every gene has 2 alleles – one paternal + one maternal
• Exon – Coding region of DNA (1.5%)
• Intron – Non coding region of DNA (98.5%)
Definitions
• Heterozygous
• Homozygous
• Dominant inheritance
• Recessive
• Co-dominant
• Pleiotropy
• Incomplete penetrance
• Variable expressivity
• Anticipation
Mutation
Point
mutation
Silent
Missense
Non sense
Frame shift
mutation
Chromosomal abnormalities
• Structural
• Deletion
• Insertion
• Translocation
• Ring chromosome
• Iso chromosome
• Inversion
• Numerical
• Aneuploidy
• Monosomy
• Trisomy
Epigenetics
• Hereditary chemical modification in DNA/ Chromatin/ Histone at a
functional level
• No change in nucleotide sequence
• Decreased gene expression
• Processes
• DNA methylation
• Histone deacetylation
Diagnosis of genetic disorders
• Cytogenetics
• Karyotyping
• FISH
• Molecular genetics
• MLPA (Multiple ligation probe amplification)
• PCR
• Microarray
• Sequencing
Human Genetic disorders
Mutations in single
gene with large effects
Chromosomal
disorders
Complex multigenic
disorders
Mendelian disorders
Autosomal
Dominant Recessive
X linked
Dominant Recessive
Autosomal dominant
• Male = Female
• Expressed in heterozygous states
• One parent is affected
• Manifests in adulthood
• No skip generations
• Defect in structural proteins
Autosomal disorders
• Huntington’s chorea
• Hereditary spherocytosis
• Adult onset Polycystic kidney
disease
• Von Hipple Lindau disease
Von Willebrand disease
• Dystrophia myotonica
• Osteogenesis imperfecta
• Marfan’s syndrome
• Intermittent porphyria
• Neurofibromatosis 1
• Achondroplasia
• NF -2
• Tuberous sclerosis
• Familial adenomatous polyposis
Familial hypercholestrolemia
He Has A Very DOMINANT Father
Autosomal recessive disorders
• Male = Female
• Homozygous state
• When heterozygous – Carriers
• Manifests in childhood/ infancy
• Due to enzyme deficiency
Autosomal recessive disorders
• Alpha -1- antitrypsin
Ataxia telangiectasia
Alkaptonuria
• Beta-thalassemia
• Cystic fibrosis
Congenital Adrenal hyperplasia
• Deafness
• Emphysema
• Friedrich’s Ataxia
• Gaucher’s ataxia
Glycogen storage disorder
Galactosemia
• Hemochromatosis
Homocystinuria
• Inborn errors of metabolism
ABCDE…
X linked recessive disorders
• Male >> Female
• Females – Carriers
• Females are affected when random
X inactivation occurs
• When Mother is a carrier
• 50% sons are affected
• 50% daughters are carriers
• When Father is affected
• All sons are normal
• Al daughters are carriers
Criss – Cross
inheritance
X – Linked recessive diseases
• Lesch Nyhan syndrome
• Hemophilia A & B
Hunter’s disease
• Color blindness
• G6PD deficiency
• Duchenne muscular dystrophy
• Chronic granulomatous disease
• Agammaglobulinemia
• Fabry’s disease
Fragile X syndrome
• Wiscott Aldrich syndrome
Lady Harding College
Girls Don’t Care About
Foolish Words
X linked Dominant disorders
• Mother is affected
• Both sons and daughters are affected
• Father is affected
• Only daughters are affected
X – Linked Dominant
• Rett’s syndrome
• Alport syndrome
• Vitamin D resistant rickets
• Incontinentia pigmenti
RAVI
Marfan’s Syndrome
Defect in fibrillin 1 (FBN 1) and
fibrillin 2 (FBN 2) gene
Excess of TGf - β
Elastin destroyed
Hyperelasticity of skin
Congenital contractural
arachnodactyly
Clinical presentations
Skeletal
defects
Tall stature
Hyper extensible
joints
Dolicocephalic head
Ocular
defects
Ectopia lentis
Superotemporal
dislocation of lens
CVS
defects
MV prolapse
Aortic dissection
Diagnosis & treatment
• Revised Ghent’s criteria
• Family history
• Signs & symptoms
• Fibrillin 1 gene mutation
• Treatment
• TGF – β blocker - Losartan
Ehlers – Danlos syndrome
• Defects in collagen synthesis or
assembly
• Clinical features
• Fragile & hyperextensible skin
• Hypermobile joints
• Ruptures on colon, cornea or large
arteries
• Poor wound healing
Familial hypercholestrelemia
• Autosomal dominant
• Mutations in the gene encoding
for
• LDL receptor
• ApoB protein
• Activating mutations of PCSK 9
• Clinical features
• Elevated serum cholesterol
• Atherosclerosis
• Coronary artery disease
• Xanthoma
Lysosomal storage diseases
Disorders Enzyme deficiency
Sphingolipidoses
Gaucher’s disease Glucocerebrosidase
Tay sach’s disease Hexosaminidase A
Fabry disease Alpha galactosidase
Krabbe disease Galactocerebrosidase
Niemann pick disease Sphingomyelinase
Mucopolysaccharidoses
Hurler syndrome Alpha L iduronidase
Hunter Syndrome Iduronate 2 sulphatase
Glycogen storage diseases
Type Deficient enzyme
I – Von Gierke Glucose – 6 – Phosphate
II – Pompe Lysosomal α 1,4 glycosidase
III – Cori Debranching enzyme
IV – Anderson Branching Enzyme
V - McArdle Muscle glycogen phosphorylase
VI – Hers Hepatic Glycogen phosphorylase
Down syndrome – Trisomy 21
• Most common chromosomal disorder
• Most common genetic cause of mental
retardation
• Pathogenesis
• Meiotic non disjunction
• Robertsonian translocation
• mosaics
• Complications
• CVS – Endocardial cushion defect, VSD
• GIT – duodenal atresia, Hirschsprung disease
• Acute leukemia
• Hypothyroidism
• Premature Alzheimer’s disease
Klinefelter syndrome
• Most common cause of male
hypogonadism
• More the X chromosome, more
the mental retardation
• Pathogenesis
• Meiotic non dysjunction
• Testicular biopsy
• Leydig cell hyperplasia
• Increased FSH, LH
• Decreased testosterone
Turner syndrome
• Most common cause of female
hypogonadism
• Pathogenesis
• Meiotic non – dysjunction
• Anaphase lag
• Ring chromosome
• Isochromosome
• mosaics
Fragile X syndrome
• X linked recessive disorder
• Loss of function mutation in
FMR 1 gene leading to increased
CGG repeats
• Most common inherited cause of
mental retardation
• Macro-orchidism
Prader – Willi syndrome
• Maternal allele is silenced
• Paternal allele – normal
• Clinical features
• Small bird like head
• Mentally retarded
• Respiratory problems
• Obesity
• Short lifespan
• Hyperphagia
• Hypogonadism
• hypotonia
Angelman syndrome
• Paternal gene is silenced
• Maternal gene – normal
• Clinical features
• Inappropriate laughter
• Stiff/ ataxic movements
• Microcephaly
• Seizures
• Mental retardation

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GENETIC DISORDER, MUTATIONS, CYTOGENETIC DISORDERS

  • 2. Concepts • Genetics is the study of genes • 23 pairs of chromosomes • 22 pairs – Autosomal • One pair – sex chromosome • 20000 – 30000 genes • Every gene has 2 alleles – one paternal + one maternal • Exon – Coding region of DNA (1.5%) • Intron – Non coding region of DNA (98.5%)
  • 3. Definitions • Heterozygous • Homozygous • Dominant inheritance • Recessive • Co-dominant • Pleiotropy • Incomplete penetrance • Variable expressivity • Anticipation
  • 5. Chromosomal abnormalities • Structural • Deletion • Insertion • Translocation • Ring chromosome • Iso chromosome • Inversion • Numerical • Aneuploidy • Monosomy • Trisomy
  • 6. Epigenetics • Hereditary chemical modification in DNA/ Chromatin/ Histone at a functional level • No change in nucleotide sequence • Decreased gene expression • Processes • DNA methylation • Histone deacetylation
  • 7. Diagnosis of genetic disorders • Cytogenetics • Karyotyping • FISH • Molecular genetics • MLPA (Multiple ligation probe amplification) • PCR • Microarray • Sequencing
  • 8. Human Genetic disorders Mutations in single gene with large effects Chromosomal disorders Complex multigenic disorders
  • 10. Autosomal dominant • Male = Female • Expressed in heterozygous states • One parent is affected • Manifests in adulthood • No skip generations • Defect in structural proteins
  • 11. Autosomal disorders • Huntington’s chorea • Hereditary spherocytosis • Adult onset Polycystic kidney disease • Von Hipple Lindau disease Von Willebrand disease • Dystrophia myotonica • Osteogenesis imperfecta • Marfan’s syndrome • Intermittent porphyria • Neurofibromatosis 1 • Achondroplasia • NF -2 • Tuberous sclerosis • Familial adenomatous polyposis Familial hypercholestrolemia He Has A Very DOMINANT Father
  • 12. Autosomal recessive disorders • Male = Female • Homozygous state • When heterozygous – Carriers • Manifests in childhood/ infancy • Due to enzyme deficiency
  • 13. Autosomal recessive disorders • Alpha -1- antitrypsin Ataxia telangiectasia Alkaptonuria • Beta-thalassemia • Cystic fibrosis Congenital Adrenal hyperplasia • Deafness • Emphysema • Friedrich’s Ataxia • Gaucher’s ataxia Glycogen storage disorder Galactosemia • Hemochromatosis Homocystinuria • Inborn errors of metabolism ABCDE…
  • 14. X linked recessive disorders • Male >> Female • Females – Carriers • Females are affected when random X inactivation occurs • When Mother is a carrier • 50% sons are affected • 50% daughters are carriers • When Father is affected • All sons are normal • Al daughters are carriers Criss – Cross inheritance
  • 15. X – Linked recessive diseases • Lesch Nyhan syndrome • Hemophilia A & B Hunter’s disease • Color blindness • G6PD deficiency • Duchenne muscular dystrophy • Chronic granulomatous disease • Agammaglobulinemia • Fabry’s disease Fragile X syndrome • Wiscott Aldrich syndrome Lady Harding College Girls Don’t Care About Foolish Words
  • 16. X linked Dominant disorders • Mother is affected • Both sons and daughters are affected • Father is affected • Only daughters are affected
  • 17. X – Linked Dominant • Rett’s syndrome • Alport syndrome • Vitamin D resistant rickets • Incontinentia pigmenti RAVI
  • 18. Marfan’s Syndrome Defect in fibrillin 1 (FBN 1) and fibrillin 2 (FBN 2) gene Excess of TGf - β Elastin destroyed Hyperelasticity of skin Congenital contractural arachnodactyly
  • 19. Clinical presentations Skeletal defects Tall stature Hyper extensible joints Dolicocephalic head Ocular defects Ectopia lentis Superotemporal dislocation of lens CVS defects MV prolapse Aortic dissection
  • 20. Diagnosis & treatment • Revised Ghent’s criteria • Family history • Signs & symptoms • Fibrillin 1 gene mutation • Treatment • TGF – β blocker - Losartan
  • 21. Ehlers – Danlos syndrome • Defects in collagen synthesis or assembly • Clinical features • Fragile & hyperextensible skin • Hypermobile joints • Ruptures on colon, cornea or large arteries • Poor wound healing
  • 22.
  • 23. Familial hypercholestrelemia • Autosomal dominant • Mutations in the gene encoding for • LDL receptor • ApoB protein • Activating mutations of PCSK 9 • Clinical features • Elevated serum cholesterol • Atherosclerosis • Coronary artery disease • Xanthoma
  • 24. Lysosomal storage diseases Disorders Enzyme deficiency Sphingolipidoses Gaucher’s disease Glucocerebrosidase Tay sach’s disease Hexosaminidase A Fabry disease Alpha galactosidase Krabbe disease Galactocerebrosidase Niemann pick disease Sphingomyelinase Mucopolysaccharidoses Hurler syndrome Alpha L iduronidase Hunter Syndrome Iduronate 2 sulphatase
  • 25. Glycogen storage diseases Type Deficient enzyme I – Von Gierke Glucose – 6 – Phosphate II – Pompe Lysosomal α 1,4 glycosidase III – Cori Debranching enzyme IV – Anderson Branching Enzyme V - McArdle Muscle glycogen phosphorylase VI – Hers Hepatic Glycogen phosphorylase
  • 26. Down syndrome – Trisomy 21 • Most common chromosomal disorder • Most common genetic cause of mental retardation • Pathogenesis • Meiotic non disjunction • Robertsonian translocation • mosaics • Complications • CVS – Endocardial cushion defect, VSD • GIT – duodenal atresia, Hirschsprung disease • Acute leukemia • Hypothyroidism • Premature Alzheimer’s disease
  • 27. Klinefelter syndrome • Most common cause of male hypogonadism • More the X chromosome, more the mental retardation • Pathogenesis • Meiotic non dysjunction • Testicular biopsy • Leydig cell hyperplasia • Increased FSH, LH • Decreased testosterone
  • 28. Turner syndrome • Most common cause of female hypogonadism • Pathogenesis • Meiotic non – dysjunction • Anaphase lag • Ring chromosome • Isochromosome • mosaics
  • 29. Fragile X syndrome • X linked recessive disorder • Loss of function mutation in FMR 1 gene leading to increased CGG repeats • Most common inherited cause of mental retardation • Macro-orchidism
  • 30. Prader – Willi syndrome • Maternal allele is silenced • Paternal allele – normal • Clinical features • Small bird like head • Mentally retarded • Respiratory problems • Obesity • Short lifespan • Hyperphagia • Hypogonadism • hypotonia
  • 31. Angelman syndrome • Paternal gene is silenced • Maternal gene – normal • Clinical features • Inappropriate laughter • Stiff/ ataxic movements • Microcephaly • Seizures • Mental retardation