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Evaluating the impacts of the development of irrigation schemes in arid and semi-arid areas in Kenya
on ecosystems biodiversity and its capacity to regulate infectious diseases
B. Bett1, M. Said1, I. Njeru2, S. Kifugo1, J. Gachohi1, R. Sang3, S. Bukachi4, D. Grace1
1. International Livestock Research Institute, P. O. Box 30709-00100, Nairobi; b.bett@cgiar.org
2. Division of Disease Surveillance and Response, Ministry of Health
3. Kenya Medical Research Institute
4. Institute of Anthropology, Gender and African Studies, University of Nairobi

Introduction

Fig.1: Map of the study area

•

Intact ecosystems maintain a stable biodiversity and processes that support the production of a
range of ecosystem services. Anthropogenic land use changes cause transformation of these
systems , leading to a decline in their capacity to control disasters such as floods, landslides,
infectious disease epidemics, etc.

•

This study assesses linkages between land use, climate and biodiversity changes on human health
and wellbeing by evaluating the effects of the development of irrigation schemes on the
emergence and transmission of vector-borne diseases such as Rift Valley fever (RVF), malaria,
West Nile virus and other arboviruses in the coast and northeastern Kenya

•

The study site is illustrated in Fig. 1 while the conceptual framework, adapted from the
Millennium Assessment (2005), is shown in Fig. 2

•

The results presented include analyses on historical data on ecological changes that have occurred
in the region since the 1970s, when the schemes were developed, to the 2000s. They also include
predictions that have been generated from a dynamics systems model for RVF

The study sites:
-

Ijara district, Garissa County is an area where pastoralism is the main livelihood activity. It represents a site that
has slow or minimal land use changes

-

Bura and Hola irrigation schemes, Tana River County, has two of the main irrigation schemes along Tana River,
Kenya. It represents a site with substantial land use changes

Emerging results
Biodiversity changes
•

•

There has been a gradual decline in
population densities of a number of wild
mammals especially in the irrigated areas
(Fig. 3)
Participatory studies suggest that the
populations of rodents and baboons have
increased in irrigated areas, and so there
is a risk of them acting as reservoirs for
zoonotic diseases

Fig.2. Conceptual framework illustrating key linkages between land use
and climate change, biodiversity and human health and wellbeing

RVF transmission dynamics
•

A dynamic systems model has been developed and used to simulate
RVF transmission dynamics in the two study sites described in Fig. 1.

•

The model integrates hydrology, vector, host and socio-economics
parameters and it is driven by daily precipitation obtained from the
Tropical Rainfall Measuring Mission (TRMM). Predictions for the Ijara
study site are represented in Fig. 4 while those for irrigated areas in
Tana River are given in Fig. 5. Simulations are provided for the
period: Jan 2005 (day 0) to June 2010 (day 2000).

Industrialization
& other human
activities that
generate gases
with greenhouse
effect

Public health dimensions
•

Medical records for most of the febrile diseases that were treated at
the local hospitals and dispensaries over the period 2007 to 2012
were obtained and analysed. The distribution of cases classified as
malaria and brucellosis are shown in Fig. 6 and 7, respectively.

Fig. 4. Predicted RVF outbreaks in Ijara in cattle and sheep for the period
Jan 2005 to June 2010

Ijara
Tana River

16000
14000

Fig. 3: Changes in large mammal populations between 1970s – 2000s

Number of cases

Number of cases

12000
10000
8000
6000
4000
2000
0
2007

• Entomological studies have also been done
to compare the types of mosquito species
that are found in irrigated and non-irrigated
areas. Trapping was done using CDC
miniature light trap shown in Plate 1.

• Results obtained from initial surveys
suggest that:
- Most of the adult mosquitoes sampled in irrigated
areas during the dry season were floodwater Aedes
mosquitoes: Aedes (Ae) mcinthoshi and Ae
sudanensis. These are known to be the primary
vectors of RVF
- During the same season, no adult mosquitoes were
trapped in the non-irrigated areas and there were
no breeding sites observed in these areas
- Larvae were also sampled from the irrigation canals
and other breeding sites in the irrigated areas and
reared to adults at the Kenya Medical Research
Institute (KEMRI) laboratory in Nairobi. These
larvae emerged to Anopheles spp. and Culex spp.
mosquitoes. More work is being done to identify
Aedes spp. from these breeding sites.

In general, the irrigated areas have a
lower diversity of mammalian hosts
and a higher population density and
diversity of mosquito species

2009

2010

2011

2012

Year

Fig.6. Distribution of cases classified as malaria in
the two study sites

2007

2008

2009

2010

2011

2012

Year

Fig.7. Distribution of cases classified as
brucellosis in Ijara

• In general, the data suggests that there has been a gradual
decline of cases diagnosed as malaria, with Ijara district
having a slightly lower number of cases than Tana River
County
Fig. 5. Predicted patterns of RVF occurrence in irrigated areas of Tana
River county in cattle and sheep for the period Jan 2005 to June 2010

Plate 1: CDC miniature light trap used for mosquito sampling

2008

90
80
70
60
50
40
30
20
10
0

• The model suggests that irrigated areas are likely to sustain
an endemic transmission of RVF following an initial
epidemic, if standing water masses are maintained so as to
support the development of mosquito vectors
• The changes in the host diversity demonstrated in Fig. 3 is
likely to change the patterns of transmission of zoonotic
pathogens in the region given that rodents and baboons are
likely to play a bigger role in the maintenance of zoonotic
pathogens in irrigated areas while big mammals contribute
more to these transmission dynamics in the pastoral areas.
Reference

Millennium Ecosystem Assessment, (2005). Washington,
DC, Island Press

• Cases diagnosed as brucellosis have also been declining and
no such cases were obtained from hospitals in Tana River
County
• No RVF cases have been reported in both sites in the period
considered
• The local hospitals report three diseases (malaria,
brucellosis and typhoid) as the main causes of febrile
illnesses in people. The study will investigate whether there
are other pathogens that cause similar illnesses in the area,
and their distribution by land use.
• Information generated would be used to build capacity on
differential diagnosis of febrile illnesses among the health
service providers in the local hospitals.
This study work falls under the project ‘Dynamic Drivers of Disease in Africa: Ecosystems, livestock/wildlife,
health and wellbeing: REF:NE/J001422/1” partly funded with support from the Ecosystem Services for
Poverty Alleviation Programme (ESPA). The ESPA program is funded by the Department for International
Development (DFID), the Economic and Social Research Council (ESRC) and the Natural Environment
Research Council (NERC).

Fourth International Conference on Infectious Disease Dynamics , Amsterdam, The Netherlands

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Evaluating the impacts of the development of irrigation schemes in arid and semi-arid areas in Kenya on ecosystems biodiversity and its capacity to regulate infectious diseases

  • 1. Evaluating the impacts of the development of irrigation schemes in arid and semi-arid areas in Kenya on ecosystems biodiversity and its capacity to regulate infectious diseases B. Bett1, M. Said1, I. Njeru2, S. Kifugo1, J. Gachohi1, R. Sang3, S. Bukachi4, D. Grace1 1. International Livestock Research Institute, P. O. Box 30709-00100, Nairobi; b.bett@cgiar.org 2. Division of Disease Surveillance and Response, Ministry of Health 3. Kenya Medical Research Institute 4. Institute of Anthropology, Gender and African Studies, University of Nairobi Introduction Fig.1: Map of the study area • Intact ecosystems maintain a stable biodiversity and processes that support the production of a range of ecosystem services. Anthropogenic land use changes cause transformation of these systems , leading to a decline in their capacity to control disasters such as floods, landslides, infectious disease epidemics, etc. • This study assesses linkages between land use, climate and biodiversity changes on human health and wellbeing by evaluating the effects of the development of irrigation schemes on the emergence and transmission of vector-borne diseases such as Rift Valley fever (RVF), malaria, West Nile virus and other arboviruses in the coast and northeastern Kenya • The study site is illustrated in Fig. 1 while the conceptual framework, adapted from the Millennium Assessment (2005), is shown in Fig. 2 • The results presented include analyses on historical data on ecological changes that have occurred in the region since the 1970s, when the schemes were developed, to the 2000s. They also include predictions that have been generated from a dynamics systems model for RVF The study sites: - Ijara district, Garissa County is an area where pastoralism is the main livelihood activity. It represents a site that has slow or minimal land use changes - Bura and Hola irrigation schemes, Tana River County, has two of the main irrigation schemes along Tana River, Kenya. It represents a site with substantial land use changes Emerging results Biodiversity changes • • There has been a gradual decline in population densities of a number of wild mammals especially in the irrigated areas (Fig. 3) Participatory studies suggest that the populations of rodents and baboons have increased in irrigated areas, and so there is a risk of them acting as reservoirs for zoonotic diseases Fig.2. Conceptual framework illustrating key linkages between land use and climate change, biodiversity and human health and wellbeing RVF transmission dynamics • A dynamic systems model has been developed and used to simulate RVF transmission dynamics in the two study sites described in Fig. 1. • The model integrates hydrology, vector, host and socio-economics parameters and it is driven by daily precipitation obtained from the Tropical Rainfall Measuring Mission (TRMM). Predictions for the Ijara study site are represented in Fig. 4 while those for irrigated areas in Tana River are given in Fig. 5. Simulations are provided for the period: Jan 2005 (day 0) to June 2010 (day 2000). Industrialization & other human activities that generate gases with greenhouse effect Public health dimensions • Medical records for most of the febrile diseases that were treated at the local hospitals and dispensaries over the period 2007 to 2012 were obtained and analysed. The distribution of cases classified as malaria and brucellosis are shown in Fig. 6 and 7, respectively. Fig. 4. Predicted RVF outbreaks in Ijara in cattle and sheep for the period Jan 2005 to June 2010 Ijara Tana River 16000 14000 Fig. 3: Changes in large mammal populations between 1970s – 2000s Number of cases Number of cases 12000 10000 8000 6000 4000 2000 0 2007 • Entomological studies have also been done to compare the types of mosquito species that are found in irrigated and non-irrigated areas. Trapping was done using CDC miniature light trap shown in Plate 1. • Results obtained from initial surveys suggest that: - Most of the adult mosquitoes sampled in irrigated areas during the dry season were floodwater Aedes mosquitoes: Aedes (Ae) mcinthoshi and Ae sudanensis. These are known to be the primary vectors of RVF - During the same season, no adult mosquitoes were trapped in the non-irrigated areas and there were no breeding sites observed in these areas - Larvae were also sampled from the irrigation canals and other breeding sites in the irrigated areas and reared to adults at the Kenya Medical Research Institute (KEMRI) laboratory in Nairobi. These larvae emerged to Anopheles spp. and Culex spp. mosquitoes. More work is being done to identify Aedes spp. from these breeding sites. In general, the irrigated areas have a lower diversity of mammalian hosts and a higher population density and diversity of mosquito species 2009 2010 2011 2012 Year Fig.6. Distribution of cases classified as malaria in the two study sites 2007 2008 2009 2010 2011 2012 Year Fig.7. Distribution of cases classified as brucellosis in Ijara • In general, the data suggests that there has been a gradual decline of cases diagnosed as malaria, with Ijara district having a slightly lower number of cases than Tana River County Fig. 5. Predicted patterns of RVF occurrence in irrigated areas of Tana River county in cattle and sheep for the period Jan 2005 to June 2010 Plate 1: CDC miniature light trap used for mosquito sampling 2008 90 80 70 60 50 40 30 20 10 0 • The model suggests that irrigated areas are likely to sustain an endemic transmission of RVF following an initial epidemic, if standing water masses are maintained so as to support the development of mosquito vectors • The changes in the host diversity demonstrated in Fig. 3 is likely to change the patterns of transmission of zoonotic pathogens in the region given that rodents and baboons are likely to play a bigger role in the maintenance of zoonotic pathogens in irrigated areas while big mammals contribute more to these transmission dynamics in the pastoral areas. Reference Millennium Ecosystem Assessment, (2005). Washington, DC, Island Press • Cases diagnosed as brucellosis have also been declining and no such cases were obtained from hospitals in Tana River County • No RVF cases have been reported in both sites in the period considered • The local hospitals report three diseases (malaria, brucellosis and typhoid) as the main causes of febrile illnesses in people. The study will investigate whether there are other pathogens that cause similar illnesses in the area, and their distribution by land use. • Information generated would be used to build capacity on differential diagnosis of febrile illnesses among the health service providers in the local hospitals. This study work falls under the project ‘Dynamic Drivers of Disease in Africa: Ecosystems, livestock/wildlife, health and wellbeing: REF:NE/J001422/1” partly funded with support from the Ecosystem Services for Poverty Alleviation Programme (ESPA). The ESPA program is funded by the Department for International Development (DFID), the Economic and Social Research Council (ESRC) and the Natural Environment Research Council (NERC). Fourth International Conference on Infectious Disease Dynamics , Amsterdam, The Netherlands