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BioLing
Interdisciplinary - Corpus driven -
          Collaboration


     Wandl-Vogt,E.1 Mohr,R.1
      Rainer,H.2 Koller,W.2
       1
        Academía de cienias de Austria
       2
         Museo d‘historia natural de Viena
focus

• pilot on vernacular-, folk-, book-names of
  plants and fungi
• synergies through interdisciplinary
  collaboration

                        method & first results


                                      CLIC2013 Alacant 2013-03-14
what we do..

OpenUp!+Flora of Austria+Taxonomic
 Monographs+Digitisation

WBÖ+DBÖ

                         e-infrastructures


                                CLIC2013 Al a Cant 2013-03-14
overview


• environment and projects
  WBÖ+DBÖ, EUROPEANA, OpenUp!
• taxon names for biological organisms
• collaboration
• conclusio / outlook



                                    CLIC2013 al Acanth 2013-03-14
projects | WBÖ + DBÖ

dialectal dictionary
Bavarian dialects in the Austrian-Hungarian monarchy
   – analogue corpus    1912-
   – dictionary         1963-
   – digital corpus     1993-

   –   WBÖ 5.vol. (E-)
   –   DBÖ (D-/T- Z)
   –   DBÖ (fungi) 07.2010
   –   WBÖ eBook 07.2012 (Beta)

                                           oeaw.ac.at/dinamlex
                                              wboe.oeaw.ac.at

                                                CLIC2013 Al a‘Cant 2013-03-14
projects | EUROPEANA

• „think culture“
• portal for European cultural heritage / legacy

• „Europeana enables people to explore the digital
  resources of Europe's museums, libraries, archives
  and audio-visual collections. It promotes discovery
  and networking opportunities in a multilingual space
  where users can engage, share in and be inspired by
  the rich diversity of Europe's cultural and scientific
  heritage.“
                                      www.europeana.eu
projects | OpenUp!

• EUROPEANA framework
• „opening up natural history“

• „…provide multimedia content with specific
  biological and multilingual functionality to a
  wide audience through a the EUROPEANA
  portal“
                                 www.open-up.eu
                                    CLIC2013 Al Ak Ant 2013-03-14
projects | OpenUp! WP6
• mapping of scientific taxon name with multilingual
  vernacular names representations („meanings“)
• evaluation of existing metadata models for
  integration of common names, geographical
  placenames and person names in OpenUp!
• validation of scientific names, common names,
  geographical placenames and person-names on the
  basis of reference systems ( thesauri )
• establishment of an „enrichment service layer“
projects | OpenUp! WP6
    multilingual metadata enrichment – common names
Provider

ABCD 2.06
<xs:element name="FullScientificNameString" type="String">
Bellis perennis L.
</xs:element>
common name
Ausdauerndes Gänseblümchen (German)           Busserl
Cvetiče ledinsko (Croatian)                   BöW WBÖ …
Daisy (English)
…..
ESE-Title: Bellis perennis L.
ESE-addTitle: Ausdauerndes Gänseblümchen
            Cvetiče ledinsko
            Daisy
collaboration | WP6 + WBÖ|DBÖ

framework for collaboration
• benefits for both partners
• following established workflows
• (actually) no new financial ressources needed
collaboration | WP6 + WBÖ|DBÖ

• WP6 – to do: data model / metadata schema
  challenge:
  absent linguistic knowledge and expertise
  name is a linguistic category


• WBÖ|DBÖ – to do: definitions for folk- /
  common / vernacular names
  challenge:
  absent botanical knowledge and expertise
  instability of scientific taxon names > „moving targets“
collaboration |
WP6 + WBÖ|DBÖ




          1998
collaboration | WP6 + WBÖ|DBÖ
                    wboe.oeaw.ac.at
(web)services | WP6 + WBÖ|DBÖ

                         vhv &
                      dbo@ema
                     webservice
(web)services | WP6 + WBÖ|DBÖ

                         vhv &
                      dbo@ema
                     webservice
(web)services | WP6 + WBÖ|DBÖ

                         vhv &
                      dbo@ema
                     webservice
collaboration| WP6 + WBÖ|DBÖ
common names model




                            open-up.eu
collaboration | WP6 + WBÖ|DBÖ
common names model – linguistic part




                                       open-up.eu
collaboration | WP6 + WBÖ|DBÖ
common names model – biological part




                                       open-up.eu
goal | WBÖ|DBÖ @ EUROPEANA
future | foundations

• distributed expertise
• standards
  missing standards > elaboration,
  integration existing standards (ABCD, ASI, ISO..)
• „open access“
  infrastructure, tools, data
future | foundations

• distributed expertise
• standards
  missing standards > elaboration,
  integration existing standards (ABCD, ASI, ISO..)
• „open access“
  infrastructure, tools, data


 data
   join in!
                                      CLIC2013 à la Kant 2013-03-14
collaboration | foundations

• domain experts 
  ↑
   quality
  ↑
   quantity

• standards, Open Access, Open Linked Data 
  reusability of data
  ↑
   access to data


                                               CLIC2013 Ali Kant 2013-03-14
future | foundations

project idea

•bidirectional webservices
            linguistics   biology

•moving targets
          scientific taxon names
          classifications

                                      CLIC2013 Ali Cant 2013-03-14
future | foundations




 BioLing 


               CLIC2013 Alicante 2013-03-14
open-up.eu / europeana.at


благодаря σας ευχαριστώ ‫תודה‬
  kiitos gràcies děkuji hvala tak
   go raibh maith agat thanx
 köszönöm aitäh dziękuję 謝謝
              danke

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Cilc2013 .hr.wk.ewv 20130314

  • 1. BioLing Interdisciplinary - Corpus driven - Collaboration Wandl-Vogt,E.1 Mohr,R.1 Rainer,H.2 Koller,W.2 1 Academía de cienias de Austria 2 Museo d‘historia natural de Viena
  • 2. focus • pilot on vernacular-, folk-, book-names of plants and fungi • synergies through interdisciplinary collaboration  method & first results CLIC2013 Alacant 2013-03-14
  • 3. what we do.. OpenUp!+Flora of Austria+Taxonomic Monographs+Digitisation WBÖ+DBÖ  e-infrastructures CLIC2013 Al a Cant 2013-03-14
  • 4. overview • environment and projects WBÖ+DBÖ, EUROPEANA, OpenUp! • taxon names for biological organisms • collaboration • conclusio / outlook CLIC2013 al Acanth 2013-03-14
  • 5. projects | WBÖ + DBÖ dialectal dictionary Bavarian dialects in the Austrian-Hungarian monarchy – analogue corpus 1912- – dictionary 1963- – digital corpus 1993- – WBÖ 5.vol. (E-) – DBÖ (D-/T- Z) – DBÖ (fungi) 07.2010 – WBÖ eBook 07.2012 (Beta) oeaw.ac.at/dinamlex wboe.oeaw.ac.at CLIC2013 Al a‘Cant 2013-03-14
  • 6. projects | EUROPEANA • „think culture“ • portal for European cultural heritage / legacy • „Europeana enables people to explore the digital resources of Europe's museums, libraries, archives and audio-visual collections. It promotes discovery and networking opportunities in a multilingual space where users can engage, share in and be inspired by the rich diversity of Europe's cultural and scientific heritage.“ www.europeana.eu
  • 7. projects | OpenUp! • EUROPEANA framework • „opening up natural history“ • „…provide multimedia content with specific biological and multilingual functionality to a wide audience through a the EUROPEANA portal“ www.open-up.eu CLIC2013 Al Ak Ant 2013-03-14
  • 8. projects | OpenUp! WP6 • mapping of scientific taxon name with multilingual vernacular names representations („meanings“) • evaluation of existing metadata models for integration of common names, geographical placenames and person names in OpenUp! • validation of scientific names, common names, geographical placenames and person-names on the basis of reference systems ( thesauri ) • establishment of an „enrichment service layer“
  • 9. projects | OpenUp! WP6 multilingual metadata enrichment – common names Provider ABCD 2.06 <xs:element name="FullScientificNameString" type="String"> Bellis perennis L. </xs:element> common name Ausdauerndes Gänseblümchen (German) Busserl Cvetiče ledinsko (Croatian) BöW WBÖ … Daisy (English) ….. ESE-Title: Bellis perennis L. ESE-addTitle: Ausdauerndes Gänseblümchen Cvetiče ledinsko Daisy
  • 10. collaboration | WP6 + WBÖ|DBÖ framework for collaboration • benefits for both partners • following established workflows • (actually) no new financial ressources needed
  • 11. collaboration | WP6 + WBÖ|DBÖ • WP6 – to do: data model / metadata schema challenge: absent linguistic knowledge and expertise name is a linguistic category • WBÖ|DBÖ – to do: definitions for folk- / common / vernacular names challenge: absent botanical knowledge and expertise instability of scientific taxon names > „moving targets“
  • 12. collaboration | WP6 + WBÖ|DBÖ 1998
  • 13. collaboration | WP6 + WBÖ|DBÖ wboe.oeaw.ac.at
  • 14. (web)services | WP6 + WBÖ|DBÖ vhv & dbo@ema webservice
  • 15. (web)services | WP6 + WBÖ|DBÖ vhv & dbo@ema webservice
  • 16. (web)services | WP6 + WBÖ|DBÖ vhv & dbo@ema webservice
  • 17. collaboration| WP6 + WBÖ|DBÖ common names model open-up.eu
  • 18. collaboration | WP6 + WBÖ|DBÖ common names model – linguistic part open-up.eu
  • 19. collaboration | WP6 + WBÖ|DBÖ common names model – biological part open-up.eu
  • 20. goal | WBÖ|DBÖ @ EUROPEANA
  • 21. future | foundations • distributed expertise • standards missing standards > elaboration, integration existing standards (ABCD, ASI, ISO..) • „open access“ infrastructure, tools, data
  • 22. future | foundations • distributed expertise • standards missing standards > elaboration, integration existing standards (ABCD, ASI, ISO..) • „open access“ infrastructure, tools, data data join in! CLIC2013 à la Kant 2013-03-14
  • 23. collaboration | foundations • domain experts  ↑ quality ↑ quantity • standards, Open Access, Open Linked Data  reusability of data ↑ access to data CLIC2013 Ali Kant 2013-03-14
  • 24. future | foundations project idea •bidirectional webservices linguistics   biology •moving targets scientific taxon names classifications CLIC2013 Ali Cant 2013-03-14
  • 25. future | foundations  BioLing  CLIC2013 Alicante 2013-03-14
  • 26. open-up.eu / europeana.at благодаря σας ευχαριστώ ‫תודה‬ kiitos gràcies děkuji hvala tak go raibh maith agat thanx köszönöm aitäh dziękuję 謝謝 danke