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BIODEGRADATION
DILSHANA FATHIMA
M.Sc. BIOCHEMISTRY
INTRODUCTION
 Is the phenomenon of biological transformation of
organic compounds by living organisms particularly
microorganisms.
 It basically involves the conversion of complex organic
molecules to simpler ones.
 The term biotransformation is used for incomplete
biodegradation of organic compounds involving one or a
few reaction.
 Is a very important property for toxic chemicals, because
if biodegradation rate is high, the concentration &
thereby the toxic effect will be reduced rapidly.
 The range of biodegradation rate is very wide from
readily biodegradable compounds to very refractory
compounds that have a biological half life of several
years.
Environmental
condition
Compounds
to
degrade
biodegradati
on
microorganism
TYPES
Bio mineralization
 Microorganisms convert organic waste into
chemical organic matter such as water & Coշ
Ex: shells of invertebrates.
Bio transformation
 A part of organic matter is degraded, remaining
part is converted into smaller chain organic
compounds.
Ex: fermentation of sugar into alcohol
MECHANISM
 The process of biodegradation can be divided
into 3 stages
1. Bio deterioration
2. Bio fragmentation
3. Assimilation
Bio deterioration
◦ Surface level degradation that modifies the
mechanical, physical & chemical properties of the
material.
◦ Occurs when the material is exposed to abiotic factors
in the outdoor environment.
Bio fragmentation
◦ Is the lytic process in which bonds within a polymer are
cleaved generating oligomers & monomers in its place.
◦ Can be aerobic or anaerobic.
Assimilation
◦ The resulting products from bio fragmentation are then
integrated into microbial cells.
◦ Once inside the cell, products enter catabolic pathways that
either lead to production of ATP/elements of cell structure.
FACTORS AFFECTING
 Surface factors influence biodegradation;these
include chemical nature of xenobiotic, the capability
of individual microorganism, nutrient & oxygen
supply, temperature, pH & redox potential.
 Among these the chemical nature of substrate that has
to be degraded is very important.
 Some of the relevant features are:
◦ Aliphatic compounds are more easily degraded than
aromatic compounds.
◦ Presence of cyclic ring structure & length chain or branches
decrease the efficiency of biodegradation.
◦ Water soluble compounds are more easily degraded.
◦ Molecular orientation of aromatic compounds influence
biodegradation
ortho > para > meta
◦ Presence of halogen inhibit biodegradation.
 There are 2 recent developments that enhance
biodegradation by microorganisms
Bio stimulation
◦ Process by which microbial activity can be enhanced by
increased supply of nutrients/addition of certain stimulating
agents.
Bio augmentation
◦ Increase biodegradation through manipulation of genes.
THANK YOU

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Biodegradation

  • 2. INTRODUCTION  Is the phenomenon of biological transformation of organic compounds by living organisms particularly microorganisms.  It basically involves the conversion of complex organic molecules to simpler ones.  The term biotransformation is used for incomplete biodegradation of organic compounds involving one or a few reaction.  Is a very important property for toxic chemicals, because if biodegradation rate is high, the concentration & thereby the toxic effect will be reduced rapidly.  The range of biodegradation rate is very wide from readily biodegradable compounds to very refractory compounds that have a biological half life of several years.
  • 4. TYPES Bio mineralization  Microorganisms convert organic waste into chemical organic matter such as water & Coշ Ex: shells of invertebrates. Bio transformation  A part of organic matter is degraded, remaining part is converted into smaller chain organic compounds. Ex: fermentation of sugar into alcohol
  • 5. MECHANISM  The process of biodegradation can be divided into 3 stages 1. Bio deterioration 2. Bio fragmentation 3. Assimilation Bio deterioration ◦ Surface level degradation that modifies the mechanical, physical & chemical properties of the material. ◦ Occurs when the material is exposed to abiotic factors in the outdoor environment.
  • 6. Bio fragmentation ◦ Is the lytic process in which bonds within a polymer are cleaved generating oligomers & monomers in its place. ◦ Can be aerobic or anaerobic. Assimilation ◦ The resulting products from bio fragmentation are then integrated into microbial cells. ◦ Once inside the cell, products enter catabolic pathways that either lead to production of ATP/elements of cell structure.
  • 7. FACTORS AFFECTING  Surface factors influence biodegradation;these include chemical nature of xenobiotic, the capability of individual microorganism, nutrient & oxygen supply, temperature, pH & redox potential.  Among these the chemical nature of substrate that has to be degraded is very important.  Some of the relevant features are: ◦ Aliphatic compounds are more easily degraded than aromatic compounds. ◦ Presence of cyclic ring structure & length chain or branches decrease the efficiency of biodegradation.
  • 8. ◦ Water soluble compounds are more easily degraded. ◦ Molecular orientation of aromatic compounds influence biodegradation ortho > para > meta ◦ Presence of halogen inhibit biodegradation.
  • 9.  There are 2 recent developments that enhance biodegradation by microorganisms Bio stimulation ◦ Process by which microbial activity can be enhanced by increased supply of nutrients/addition of certain stimulating agents. Bio augmentation ◦ Increase biodegradation through manipulation of genes.