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Presentation of “Biochemistry 2”
Presented by :- Asifa Bibi
Department :- “Bs.Biotechnology”
Topic :- “Chromatography”
TOPIC OF PRESENTATIOn
CHROMATOGRAPHY AND
ITS TYPES
CHROMATOGRAPHY
• Chromatography is an analytical
technique commonly used for
separating a mixture of chemical substances into
its individual components, so that the individual
components can be thoroughly analyzed.
• It is also defined as the process of separation of
the individual components of a mixture based on
their relative affinities towards stationary and
mobile phases.
• The mixture is dissolved in a fluid called
the mobile phase, which carries it
through a structure holding another
material called the stationary phase.
• Its name is derived from two words: "chromo" meaning
colour, and "graphy" meaning writing. in other words, colour
bands are formed in the procedure, which are then measured or
analysed. these bands are due to separation of individual
compounds at different lengths on the column, as seen in
column chromatography and on paper in paper chromatography.
ORIGIN OF NAME:-
• The word “chromatography” was firstly coined by
the italian-born scientist Mikhail tsvet in 1903 in
russia .
• He continued to work with chromatography in the
first decade of the 20th century, primarily for the
separation of plant pigments
• Chromatography technique developed
substantially as a result of the work of archer john
porter martin and richard laurence millington
synge during the 1940s and 1950s.
HISTROY:-
• Chromatography is based on the principle of separation of
compounds into different bands (color graphs) and then
identification of those bands.
• Basically, the samples are subjected to flow by mobile
liquid onto or through the stable stationary phase. the
sample components are separated into fractions based on
their relative affinity towards the two phases during their
travel.
• Thefraction with a greater affinity to stationary layer
travels slower and at a shorter distance, while that with a
lesser affinity travels faster and longer
PRINCIPLE:-
TYPES OF CHROMATOGRAPHY
Types of chromatography to
be discussed:-
• Paper Chromatography
• Column Chromatography
• Gel Filtration
Chromatography
• Ion Exchange
Chrmoatography
• Affinity Chromatography
• Paper chromatography is an analytical chemistry technique for
separating and identifying color mixtures.
• Substances are distributed between stationary phase and a mobile
phase.
• Stationary phase is usually a piece of filter paper and mobile phase is
colors that travels up stationary phase.
• Components of the samples will separate readily according to how
strongly they absorb on the stationary phase vs. how readily they
dissolve in the mobile phase.
PAPER CHROMATOGRAPHY:
1.Paper Chromatography
HISTORY:-
• The principle involved is partition chromatography
wherein the substances are distributed or partitioned
between liquid phases. one phase is the water, which is
held in the pores of the filter paper used; and other is the
mobile phase which moves over the paper. the compounds
in the mixture get separated due to differences in their
affinity towards water (in stationary phase) and mobile
phase solvents during the movement of mobile phase under
the capillary action of pores in the paper.
PRINCIPLE:-
PRINCIPLE:-
• Ink is a solution containing a number of different molecules.
These different molecules have different characteristics such
as size and solubility. Solubility is a molecule's ability to
dissolve in a particular solvent such as alcohol, water or nail
polish remover. Because of their different characteristics,
each molecule travels at a different speed when pulled along
the piece of paper toweling by the solvent. The lightest
particles, which are not necessarily the lightest coloured
particles, move more quickly and a greater distance than the
heavier particles. Thus, all of the pigments that make up an
ink sample are separated out.
WHAT HAPPEN IN PAPER
CHROMATOGRAPHY:-
• Paper chromatography is specially used for the
separation of a mixture having polar and non-polar
compounds.
• separation of amino acids.
• Determine organic compounds, biochemical in urine
• In the pharma sector it is used for the determination of
hormones, drugs, etc.
• Sometimes it is used for evaluation of inorganic
compounds like salts and complexes
USES AND APPLICATIONS:-
2.“Column Chromatography”
Column chromatography is a preparative technique used to
purify compounds depending on their polarity or hydrophobicity.
In column chromatography, a mixture of molecules is separated
based on their differentials partitioning between a mobile phase
and a stationary phase.
Stationary phase:- is confined to a glass or plastic tube
and is mostly silica gel
Mobile phase:- (a solvent or buffer) is allowed to flow
through the solid adsorbent.
Sample:- to be analyzed is layered on top of the
column.
“2.COLUMN CHROMATOGRAPHY”
• Russian-italian botanist Mikhail Tsvet.
• Tsvet applied his observations with filter paper extraction to the
new methods of column fractionation for separating the
components of petroleum.
“HISTORY”
• The rate at which the components of a mixture are
separated depends on the
• activity of the adsorbent
• polarity of the solvent.
• If the activity of the adsorbent is very high and polarity of
the solvent is very low, then the separation is very slow but
gives a good separation. On the other hand, if the activity
of adsorbent is low and polarity of the solvent is high the
separation is rapid but gives only a poor separation,
“PRINCIPLE”
“PROCEDURE”
• Packing the column
• Loading the column
• Eluting The column
• Collecting the Eluent
• Detection of Eluting Components
“APPLICATIONS”:-
3.“Gel Filtration Chromatography”
“GEL FILTRATION”
“HISTORY”
• Analytes larger than the
pores cannot enter the
interior of the gel beads,
so they are limited to the
space between the beads.
As a result, they are not
slowed in their progress
through the column and elute rapidly in a single zone.
• Small molecules capable of diffusing in and out of the beads have a
much larger volume available to them. Therefore, they are delayed in
their journey through the column bed. Molecules of intermediate size
migrate through the column at a rate somewhere between those for
large and small molecules.
“PRINCIPLE”
1. Select columns not greater
than 100 cm in length.
2. Selection the proper gel,
which act as stationary phase
3.Layer sample on the column.
4.Add buffer to wash proteins
through the column.
5. Eluting the sample
6. At th end collect the fraction.
“HOW DOES IT WORKS?”
• Fractionation of molecules and complexes within a predetermined
size range
• Size analysis and determination
• Removal of large proteins and complexes
• Desalting
• Removal of small molecules
• Assessment of sample purity
• purification.
• molecular weight determination and quantitative analysis of
molecular interactions.
“APPLICATIONS”:-
4.“Ion Exchange Chromatography”
• Allows the separation of ions and polar molecules based on the
charge properties of the molecules.
• A type of column chromatography
• Useful in the separation of charge compounds like proteins
differing by only one charged amino acid.
(ion exchanger components)
(buffered sollution)
( positive/negative)
“INTRODUCTION”:-
Polymers that are capable of exchanging particular ions within the polymer with ions in a
solution that is passed through them
A-polystyrene: polymerisation reaction
Of styrene and divinylbenzene, useful
For separating small molecular weight
Compounds
B-cellulose: readily obtained in a high
Pure state,greater permeability to
Macromolecules
“COMPONENT OF ION EXCHANGE”:-
 The choice of ion exchangers depends upon the stability,
molecular weight, and ionic strength of the sample components
 Volume of exchanger 2.5 fold greater than to exchange with the
ion in the sample
 Anion exchangers
Retains positively charged cations
Because the stationary phase displays
A negatively charged group
 Cation exchangers
Retains anions using positively charged group
“COMPONENT OF ION EXCHANGE”:-
 Ion exchange chromatography relies on the attraction between oppositely charged stationary
phase, known as an ion exchanger, and analyze.
 To these covalently bound functional groups the oppositely charged ions are bounded (mobile
counter ion), which will be exchanged with like charge ions in the sample having charge
magnitude more than the ions bounded to the matrix.
 Thus if anion exchange chromatography is performed, negatively charged sample
components will interact more with the stationary phase and will be exchanged for like
charged ions already bounded to the matrix.
“PRINCIPLE”:-
Positively charged molecules are attracted to a negatively charged
solid support. Commonly used cation exchange resins are s-resin,
sulfate derivatives; and CM resins, carboxylate derived ions
“TYPES OF ION EXCHANGE
CHROMATOGRAPHY”:-
Negatively charged molecules is attracted to a
positively charged solid support. Commonly used anion
exchange resins are q-resin and DEAE resin
“TYPES OF ION EXCHANGE
CHROMATOGRAPHY”:-
Step1
A sample introduced into a sample
Loop of known volume
Step 2 “Set the column (equlibrium phase)”
 The mobile phase carries the sample
From the loop onto a column that contains
Some form of stationary phase material
 Stationary phase material is a resin or gel matrix consisting of
cellulose beads with covalently bonded charged functional groups.
“PROCEDUE”:-
Step3 “sample application into the column”
The target analytes (anions or cations) are retained on the stationary phase
Step4 “elution”
 When we increased the concentration of a similarly charged species it will displace
the analyte ions from the stationary phase.
 The analytes of interest must then be detected by some means, typically by
conductivity or uv/visible light absorbance.
Step5 “regeneration”
Cation exchanger = by acid then washed with water
Anion exchanger =by alkali then washed with water
1. Separating the proteins
 Separates proteins according to their net charge, which is
dependent on the composition of the mobile phase(by
adjusting the ph or the ionic concentration)
 Proteins are charged molecules. At specific ph, it can exist in
anionic (-), cationic (+) or zwitterion (no net charge) stage.
cationic pH =pI anionic
pH increase
“APPLICATIONS”:-
 Hardness due to the presence of ca2+.Mg2+
 Removed by passing hard water to cation exchanger changed
with na+
nar+nca2+ car + nna+
Resin hard water resin solution
Canr2 + 2nna+ nca2+ +2nanr
Resin solution resin regenerated
“APPLICATIONS”:-
 Separation of similar ions from one another
 antibody purification monoclonal antibodies
 Hemoglobins seperation
 Separation of vitamins
 Separation of inorganic cations and anions
“APPLICATIONS”:-
• Also known as bioselective adsorption
• It is a protein purification technique developed thirty
years ago.
• It is the isolation of a particular protein on a bioligand
that is attached to an inert matrix by a spacer arm.
• It relies on the specificity of a protein binding site for a
particular ligand
“INTRODUCTION”:-
“HISTORY”:-
• Specificity is based on three aspects:
Matix: for ligand attachment
Spacer arm: bind ligand to matrix
Ligand: bind with protein to purify it
“SPECIFICITY”:-
• Principle of affinity chromatography
is that the matrix combines with the
specific ligand due to specific
functional groups present on matrix .
• as the mixture of proteins is passed
through the chromatography
column, those proteins that have a
binding site for the immobilised
ligand will bind to the matrix,
while all other proteins will be
eluted from the column.
“PRINCIPLE”:-
•Step 1
Attachment of ligand to matrix
•Step 2
Attachment of proteins to complex
•Step 3
After washing proteins that are
unable to bind separated
•Step 4
Finally elution occurs and protein is
purified
“PROCEDURE”:-
“EXAMPLES”:-
Advantages
• Purify and concentrate protein
• Used in genetic engineering
• Production of vaccines
• The binding sites of biological molecules can be investigated
“ADVANTAGES”:-
• Expensive ligands
• Non-specific adsorption
• Relatively low productivity
“DISADVANTAGES”:-

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chromatography and its types

  • 1. Presentation of “Biochemistry 2” Presented by :- Asifa Bibi Department :- “Bs.Biotechnology” Topic :- “Chromatography”
  • 3. CHROMATOGRAPHY • Chromatography is an analytical technique commonly used for separating a mixture of chemical substances into its individual components, so that the individual components can be thoroughly analyzed. • It is also defined as the process of separation of the individual components of a mixture based on their relative affinities towards stationary and mobile phases.
  • 4. • The mixture is dissolved in a fluid called the mobile phase, which carries it through a structure holding another material called the stationary phase.
  • 5. • Its name is derived from two words: "chromo" meaning colour, and "graphy" meaning writing. in other words, colour bands are formed in the procedure, which are then measured or analysed. these bands are due to separation of individual compounds at different lengths on the column, as seen in column chromatography and on paper in paper chromatography. ORIGIN OF NAME:-
  • 6. • The word “chromatography” was firstly coined by the italian-born scientist Mikhail tsvet in 1903 in russia . • He continued to work with chromatography in the first decade of the 20th century, primarily for the separation of plant pigments • Chromatography technique developed substantially as a result of the work of archer john porter martin and richard laurence millington synge during the 1940s and 1950s. HISTROY:-
  • 7. • Chromatography is based on the principle of separation of compounds into different bands (color graphs) and then identification of those bands. • Basically, the samples are subjected to flow by mobile liquid onto or through the stable stationary phase. the sample components are separated into fractions based on their relative affinity towards the two phases during their travel. • Thefraction with a greater affinity to stationary layer travels slower and at a shorter distance, while that with a lesser affinity travels faster and longer PRINCIPLE:-
  • 8. TYPES OF CHROMATOGRAPHY Types of chromatography to be discussed:- • Paper Chromatography • Column Chromatography • Gel Filtration Chromatography • Ion Exchange Chrmoatography • Affinity Chromatography
  • 9. • Paper chromatography is an analytical chemistry technique for separating and identifying color mixtures. • Substances are distributed between stationary phase and a mobile phase. • Stationary phase is usually a piece of filter paper and mobile phase is colors that travels up stationary phase. • Components of the samples will separate readily according to how strongly they absorb on the stationary phase vs. how readily they dissolve in the mobile phase. PAPER CHROMATOGRAPHY:
  • 12. • The principle involved is partition chromatography wherein the substances are distributed or partitioned between liquid phases. one phase is the water, which is held in the pores of the filter paper used; and other is the mobile phase which moves over the paper. the compounds in the mixture get separated due to differences in their affinity towards water (in stationary phase) and mobile phase solvents during the movement of mobile phase under the capillary action of pores in the paper. PRINCIPLE:-
  • 14. • Ink is a solution containing a number of different molecules. These different molecules have different characteristics such as size and solubility. Solubility is a molecule's ability to dissolve in a particular solvent such as alcohol, water or nail polish remover. Because of their different characteristics, each molecule travels at a different speed when pulled along the piece of paper toweling by the solvent. The lightest particles, which are not necessarily the lightest coloured particles, move more quickly and a greater distance than the heavier particles. Thus, all of the pigments that make up an ink sample are separated out. WHAT HAPPEN IN PAPER CHROMATOGRAPHY:-
  • 15. • Paper chromatography is specially used for the separation of a mixture having polar and non-polar compounds. • separation of amino acids. • Determine organic compounds, biochemical in urine • In the pharma sector it is used for the determination of hormones, drugs, etc. • Sometimes it is used for evaluation of inorganic compounds like salts and complexes USES AND APPLICATIONS:-
  • 17. Column chromatography is a preparative technique used to purify compounds depending on their polarity or hydrophobicity. In column chromatography, a mixture of molecules is separated based on their differentials partitioning between a mobile phase and a stationary phase. Stationary phase:- is confined to a glass or plastic tube and is mostly silica gel Mobile phase:- (a solvent or buffer) is allowed to flow through the solid adsorbent. Sample:- to be analyzed is layered on top of the column. “2.COLUMN CHROMATOGRAPHY”
  • 18. • Russian-italian botanist Mikhail Tsvet. • Tsvet applied his observations with filter paper extraction to the new methods of column fractionation for separating the components of petroleum. “HISTORY”
  • 19. • The rate at which the components of a mixture are separated depends on the • activity of the adsorbent • polarity of the solvent. • If the activity of the adsorbent is very high and polarity of the solvent is very low, then the separation is very slow but gives a good separation. On the other hand, if the activity of adsorbent is low and polarity of the solvent is high the separation is rapid but gives only a poor separation, “PRINCIPLE”
  • 20.
  • 21. “PROCEDURE” • Packing the column • Loading the column • Eluting The column • Collecting the Eluent • Detection of Eluting Components
  • 26. • Analytes larger than the pores cannot enter the interior of the gel beads, so they are limited to the space between the beads. As a result, they are not slowed in their progress through the column and elute rapidly in a single zone. • Small molecules capable of diffusing in and out of the beads have a much larger volume available to them. Therefore, they are delayed in their journey through the column bed. Molecules of intermediate size migrate through the column at a rate somewhere between those for large and small molecules. “PRINCIPLE”
  • 27. 1. Select columns not greater than 100 cm in length. 2. Selection the proper gel, which act as stationary phase 3.Layer sample on the column. 4.Add buffer to wash proteins through the column. 5. Eluting the sample 6. At th end collect the fraction. “HOW DOES IT WORKS?”
  • 28. • Fractionation of molecules and complexes within a predetermined size range • Size analysis and determination • Removal of large proteins and complexes • Desalting • Removal of small molecules • Assessment of sample purity • purification. • molecular weight determination and quantitative analysis of molecular interactions. “APPLICATIONS”:-
  • 29.
  • 31. • Allows the separation of ions and polar molecules based on the charge properties of the molecules. • A type of column chromatography • Useful in the separation of charge compounds like proteins differing by only one charged amino acid. (ion exchanger components) (buffered sollution) ( positive/negative) “INTRODUCTION”:-
  • 32. Polymers that are capable of exchanging particular ions within the polymer with ions in a solution that is passed through them A-polystyrene: polymerisation reaction Of styrene and divinylbenzene, useful For separating small molecular weight Compounds B-cellulose: readily obtained in a high Pure state,greater permeability to Macromolecules “COMPONENT OF ION EXCHANGE”:-
  • 33.  The choice of ion exchangers depends upon the stability, molecular weight, and ionic strength of the sample components  Volume of exchanger 2.5 fold greater than to exchange with the ion in the sample  Anion exchangers Retains positively charged cations Because the stationary phase displays A negatively charged group  Cation exchangers Retains anions using positively charged group “COMPONENT OF ION EXCHANGE”:-
  • 34.  Ion exchange chromatography relies on the attraction between oppositely charged stationary phase, known as an ion exchanger, and analyze.  To these covalently bound functional groups the oppositely charged ions are bounded (mobile counter ion), which will be exchanged with like charge ions in the sample having charge magnitude more than the ions bounded to the matrix.  Thus if anion exchange chromatography is performed, negatively charged sample components will interact more with the stationary phase and will be exchanged for like charged ions already bounded to the matrix. “PRINCIPLE”:-
  • 35. Positively charged molecules are attracted to a negatively charged solid support. Commonly used cation exchange resins are s-resin, sulfate derivatives; and CM resins, carboxylate derived ions “TYPES OF ION EXCHANGE CHROMATOGRAPHY”:-
  • 36. Negatively charged molecules is attracted to a positively charged solid support. Commonly used anion exchange resins are q-resin and DEAE resin “TYPES OF ION EXCHANGE CHROMATOGRAPHY”:-
  • 37. Step1 A sample introduced into a sample Loop of known volume Step 2 “Set the column (equlibrium phase)”  The mobile phase carries the sample From the loop onto a column that contains Some form of stationary phase material  Stationary phase material is a resin or gel matrix consisting of cellulose beads with covalently bonded charged functional groups. “PROCEDUE”:-
  • 38. Step3 “sample application into the column” The target analytes (anions or cations) are retained on the stationary phase Step4 “elution”  When we increased the concentration of a similarly charged species it will displace the analyte ions from the stationary phase.  The analytes of interest must then be detected by some means, typically by conductivity or uv/visible light absorbance. Step5 “regeneration” Cation exchanger = by acid then washed with water Anion exchanger =by alkali then washed with water
  • 39.
  • 40. 1. Separating the proteins  Separates proteins according to their net charge, which is dependent on the composition of the mobile phase(by adjusting the ph or the ionic concentration)  Proteins are charged molecules. At specific ph, it can exist in anionic (-), cationic (+) or zwitterion (no net charge) stage. cationic pH =pI anionic pH increase “APPLICATIONS”:-
  • 41.  Hardness due to the presence of ca2+.Mg2+  Removed by passing hard water to cation exchanger changed with na+ nar+nca2+ car + nna+ Resin hard water resin solution Canr2 + 2nna+ nca2+ +2nanr Resin solution resin regenerated “APPLICATIONS”:-
  • 42.  Separation of similar ions from one another  antibody purification monoclonal antibodies  Hemoglobins seperation  Separation of vitamins  Separation of inorganic cations and anions “APPLICATIONS”:-
  • 43.
  • 44. • Also known as bioselective adsorption • It is a protein purification technique developed thirty years ago. • It is the isolation of a particular protein on a bioligand that is attached to an inert matrix by a spacer arm. • It relies on the specificity of a protein binding site for a particular ligand “INTRODUCTION”:-
  • 46. • Specificity is based on three aspects: Matix: for ligand attachment Spacer arm: bind ligand to matrix Ligand: bind with protein to purify it “SPECIFICITY”:-
  • 47. • Principle of affinity chromatography is that the matrix combines with the specific ligand due to specific functional groups present on matrix . • as the mixture of proteins is passed through the chromatography column, those proteins that have a binding site for the immobilised ligand will bind to the matrix, while all other proteins will be eluted from the column. “PRINCIPLE”:-
  • 48. •Step 1 Attachment of ligand to matrix •Step 2 Attachment of proteins to complex •Step 3 After washing proteins that are unable to bind separated •Step 4 Finally elution occurs and protein is purified “PROCEDURE”:-
  • 50. Advantages • Purify and concentrate protein • Used in genetic engineering • Production of vaccines • The binding sites of biological molecules can be investigated “ADVANTAGES”:-
  • 51. • Expensive ligands • Non-specific adsorption • Relatively low productivity “DISADVANTAGES”:-

Notas do Editor

  1. a Quaternary amine DiEthylAminoEthane
  2. Separating proteins Proteins have numerous functional groups that can have both positive and negative charges. Ion exchange chromatography separates proteins according to their net charge, which is dependent on the composition of the mobile phase. 15 Affect of pH in the separation of proteins By adjusting the pH or the ionic concentration of the mobile phase, various protein molecules can be separated. For example, if a protein has a net positive charge at pH 7, then it will bind to a column of negatively-charged beads, whereas a negatively charged protein would not. 16  
  3. .Softening of hard water We are aware of the fact that the hardenes of water is due to the presence of Ca2+.Mg2+ and other devalent ions these ions may be removed by passing hard water to cation exchanger changed with Na+ when the following exchange reaction takes place NaR+nCa+2 CaR+ nNa+ resin hard water resin solution the ca+ and Mg+ ions retained in the column wherease the sodium ions passes through the solution these na ions are harmless for washing purpose .after using ion exchange for a long time it becomes inactive its activity can be revived by perculating sodium chloride solution through the reaction CanR2+ 2nNa+ nCa2+ +2NanR Resin solution resin regenerated
  4. Monoclonal antibodies produced in mouse ascites can be separated from other components of the ascites fluid. Immunoglobulins can be separated from albumin, transferrins and proteases. Hemoglobins can be separated by high-performance cation-exchange chromatography using the Vydac strong cation-exchange column.