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Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
Developing an application profile
for the Art of Life: the mixing
and matching of art and
biodiversity data
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
What is Art of Life?
• Full title - The Art of Life: Data Mining and Crowdsourcing the
Identification and Description of Natural History Illustrations
from the Biodiversity Heritage Library (BHL)
• Grant given to Missouri Botanical Garden in St Louis
• Funded by National Endowment for the Humanities
• Runs May 2012-April 2014
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
What is the Biodiversity Heritage Library (BHL)?
The Biodiversity Heritage Library (BHL) is a consortium of natural history
and botanical libraries that cooperate to digitize and make accessible
the legacy literature of biodiversity held in their collections and to make
that literature available for open access and responsible use as a part of
a global “biodiversity commons.”
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
BHL Problem statement
– users want access to images, access to images is
limited
– How to broaden the audiences for BHL content?
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
5 Primary Objectives of Art of Life
Objective 1: Define an appropriate metadata schema for natural history illustrations
Objective 2: Build software tools to automatically identify illustrations in the BHL corpus
Objective 3: Enhance existing tools to enable the initial sorting, viewing, and editing of these
identified visual resources.
Objective 4: Integrate tagging applications to enable a community of users to edit descriptive
metadata for the illustrations
Objective 5: Integrate the descriptive metadata generated by users back into BHL portal both for
access and preservation
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
Art of Life Schema
Needs to support three purposes:
1) to enable the discovery, description and use of the identified images by
artists, biologists, humanities scholars, librarians, and educators
2) to make BHL’s metadata and images available to other platforms
3) to import crowdsourced metadata generated in other platforms back
into BHL.
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
Schema landscape review
– VRA Core 4.0 (art image community)
– LIDO (museum community)
– Dublin Core (Web community)
– Darwin Core (biodiversity community)
– Audubon Core (biodiversity community)
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
http://tinyurl.com/9hm7nsb
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
ART OF LIFE SCHEMA ELEMENTS red =required
Title
Type
Date
Copyright
Source
Agent
Subjects
Description
Inscription
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
Title Stictospiza formosa
Type Paintings
Date Publication: 1898
Agent Author: Arthur G. Butler (1844-1925)
Illustrator: F.W. Frohawk (1861-1946)
Description A pair of finches with green and yellow bodies resting on reeds
Subjects Birds, finches
Scientific name: Amandava formosa
Vernacular Name: Green Avadavat or Green Munia
Accepted Name: Amandava formosa (Latham, 1790)
Inscriptions bottom center: Green Amaduvade Waxbill (Stictospiza formosa)
Source Butler, Arthur Gardiner. Foreign finches in captivity. Hull and London: Brumby and
Clarke, limited,1889 (2nd edition). This image comes from the Biodiversity Heritage
Library, and is available online at biodiversitylibrary.org/page/17195895
Rights Public domain
Example of illustration described using Art of Life schema
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
Application Profiles
Definition
“application profiles as schemas which consist of data elements drawn from one or
more namespaces, combined together by implementors, and optimised for a
particular local application”
“The Resource Discovery Framework (RDF) syntax has provided the enabling
technology for the combination of individual elements from a variety of differing
schemas, thus allowing implementors to choose which elements are best fit for their
purpose. “
Sept 2000 article in Ariadne “Application Profiles: Mixing and Matching Metadata Schemas”
http://www.ariadne.ac.uk/issue25/app-profiles
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
Why create an Application Profile?
• Metadata schemas are rarely adopted “as is” – local needs related to our
users, cataloging systems, or display systems require adaptations
• specify what elements/attributes from a schema we will use and how
• identify elements/attributes that don’t exist in any schemas but that we
need
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
What should be included in an Application Profile?
From Framework for Dublin Core Application Profiles
• Functional Requirements
• Domain Model
• Description Set Profile and Usage Guidelines
• Syntax Guidelines and Data Formats
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
What should be included in an Application Profile?
Functional Requirements – example from Art of Life
• specify descriptive information needed by the science and art communities in
searching and using natural history illustrations
• Guide the creation of a template in Wikimedia Commons on how to record
information about the natural history illustrations found within BHL
• Export those descriptions from Wikimedia Commons back into BHL portal for
discovery.
• Within BHL portal want to view illustrations across all books related to: a)
subject area b) geographic region Will want to view all illustrations for a
specific species
• Exchange those descriptions and images more widely beyond the BHL
repository e.g. ARTstor, Encyclopedia of Life. Need records to interoperate
well in aggregated environments, therefore its critical that Art of Life chooses
elements and attributes based on internationally accepted standards
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
What should be included in an Application Profile?
Functional Requirements
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
What should be included in an Application Profile?
Domain Model
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
What should be included in an Application Profile?
Description Set Profile
and Usage Guidelines
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
What should be included in an Application Profile?
Syntax Guidelines and Data Formats
Art of Life? TBD
• XML
• RDF/XML
• Darwin Core is in RDF and VRA Core 4 in XML
• Task force looking into RDF ontology for Core 4
Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
Art of Life team
PI
Trish Rose-Sandler, Missouri Botanical Garden
Algorithm development
Ed Bachta, Charlie Moad, Kyle Jaebker, Indianapolis Museum of Art
Classification User Interface
Joel Richard, Smithsonian Institution Libraries
Schema design
Gaurav Vaidya and Robert Guralnick, University of Colorado, Boulder
William Ulate, Missouri Botanical Garden
Programming
Mike Lichtenberg, Missouri Botanical Garden
Consultants
Doug Holland, Chuck Miller, and Mike Blomberg, Missouri Botanical Garden; Chris
Freeland, Washington University (former PI for Art of Life)

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Developing an application profile for the Art of Life: the mixing and matching of art and biodiversity data

  • 1. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session Developing an application profile for the Art of Life: the mixing and matching of art and biodiversity data
  • 2. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session What is Art of Life? • Full title - The Art of Life: Data Mining and Crowdsourcing the Identification and Description of Natural History Illustrations from the Biodiversity Heritage Library (BHL) • Grant given to Missouri Botanical Garden in St Louis • Funded by National Endowment for the Humanities • Runs May 2012-April 2014
  • 3. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session What is the Biodiversity Heritage Library (BHL)? The Biodiversity Heritage Library (BHL) is a consortium of natural history and botanical libraries that cooperate to digitize and make accessible the legacy literature of biodiversity held in their collections and to make that literature available for open access and responsible use as a part of a global “biodiversity commons.”
  • 4. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
  • 5. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
  • 6. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
  • 7. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session BHL Problem statement – users want access to images, access to images is limited – How to broaden the audiences for BHL content?
  • 8. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
  • 9. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session 5 Primary Objectives of Art of Life Objective 1: Define an appropriate metadata schema for natural history illustrations Objective 2: Build software tools to automatically identify illustrations in the BHL corpus Objective 3: Enhance existing tools to enable the initial sorting, viewing, and editing of these identified visual resources. Objective 4: Integrate tagging applications to enable a community of users to edit descriptive metadata for the illustrations Objective 5: Integrate the descriptive metadata generated by users back into BHL portal both for access and preservation
  • 10. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session
  • 11. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session Art of Life Schema Needs to support three purposes: 1) to enable the discovery, description and use of the identified images by artists, biologists, humanities scholars, librarians, and educators 2) to make BHL’s metadata and images available to other platforms 3) to import crowdsourced metadata generated in other platforms back into BHL.
  • 12. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session Schema landscape review – VRA Core 4.0 (art image community) – LIDO (museum community) – Dublin Core (Web community) – Darwin Core (biodiversity community) – Audubon Core (biodiversity community)
  • 13. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session http://tinyurl.com/9hm7nsb
  • 14. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session ART OF LIFE SCHEMA ELEMENTS red =required Title Type Date Copyright Source Agent Subjects Description Inscription
  • 15. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session Title Stictospiza formosa Type Paintings Date Publication: 1898 Agent Author: Arthur G. Butler (1844-1925) Illustrator: F.W. Frohawk (1861-1946) Description A pair of finches with green and yellow bodies resting on reeds Subjects Birds, finches Scientific name: Amandava formosa Vernacular Name: Green Avadavat or Green Munia Accepted Name: Amandava formosa (Latham, 1790) Inscriptions bottom center: Green Amaduvade Waxbill (Stictospiza formosa) Source Butler, Arthur Gardiner. Foreign finches in captivity. Hull and London: Brumby and Clarke, limited,1889 (2nd edition). This image comes from the Biodiversity Heritage Library, and is available online at biodiversitylibrary.org/page/17195895 Rights Public domain Example of illustration described using Art of Life schema
  • 16. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session Application Profiles Definition “application profiles as schemas which consist of data elements drawn from one or more namespaces, combined together by implementors, and optimised for a particular local application” “The Resource Discovery Framework (RDF) syntax has provided the enabling technology for the combination of individual elements from a variety of differing schemas, thus allowing implementors to choose which elements are best fit for their purpose. “ Sept 2000 article in Ariadne “Application Profiles: Mixing and Matching Metadata Schemas” http://www.ariadne.ac.uk/issue25/app-profiles
  • 17. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session Why create an Application Profile? • Metadata schemas are rarely adopted “as is” – local needs related to our users, cataloging systems, or display systems require adaptations • specify what elements/attributes from a schema we will use and how • identify elements/attributes that don’t exist in any schemas but that we need
  • 18. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session What should be included in an Application Profile? From Framework for Dublin Core Application Profiles • Functional Requirements • Domain Model • Description Set Profile and Usage Guidelines • Syntax Guidelines and Data Formats
  • 19. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session What should be included in an Application Profile? Functional Requirements – example from Art of Life • specify descriptive information needed by the science and art communities in searching and using natural history illustrations • Guide the creation of a template in Wikimedia Commons on how to record information about the natural history illustrations found within BHL • Export those descriptions from Wikimedia Commons back into BHL portal for discovery. • Within BHL portal want to view illustrations across all books related to: a) subject area b) geographic region Will want to view all illustrations for a specific species • Exchange those descriptions and images more widely beyond the BHL repository e.g. ARTstor, Encyclopedia of Life. Need records to interoperate well in aggregated environments, therefore its critical that Art of Life chooses elements and attributes based on internationally accepted standards
  • 20. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session What should be included in an Application Profile? Functional Requirements
  • 21. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session What should be included in an Application Profile? Domain Model
  • 22. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session What should be included in an Application Profile? Description Set Profile and Usage Guidelines
  • 23. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session What should be included in an Application Profile? Syntax Guidelines and Data Formats Art of Life? TBD • XML • RDF/XML • Darwin Core is in RDF and VRA Core 4 in XML • Task force looking into RDF ontology for Core 4
  • 24. Trish Rose-Sandler, Missouri Botanical GardenVRA Conference Milwaukee WI 2014 VRA Core Unbound session Art of Life team PI Trish Rose-Sandler, Missouri Botanical Garden Algorithm development Ed Bachta, Charlie Moad, Kyle Jaebker, Indianapolis Museum of Art Classification User Interface Joel Richard, Smithsonian Institution Libraries Schema design Gaurav Vaidya and Robert Guralnick, University of Colorado, Boulder William Ulate, Missouri Botanical Garden Programming Mike Lichtenberg, Missouri Botanical Garden Consultants Doug Holland, Chuck Miller, and Mike Blomberg, Missouri Botanical Garden; Chris Freeland, Washington University (former PI for Art of Life)