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Napier grass stunt and head smut diagnostics Yaima Arocha and John Lucas Presented at the ASARECA/ILRI Workshop on Mitigating the Impact of Napier Grass Smut and Stunt Diseases, Addis Ababa, June 2-3, 2010
Rothamsted objectives ,[object Object],[object Object],[object Object],[object Object],[object Object]
NAPIER GRASS  STUNT
Etiology of NGS ,[object Object]
Detection of NGS phytoplasmas ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Cynodon dactylon  L. Medicago sativa  L. ,[object Object],[object Object],[object Object],[object Object],[object Object],Accepted for publication (full paper) in  J. Phytopathology , 2008 16SrIII-A 16SrXI 16SrXIV 16SrXIV 16SrVII 16SrVI 16SrV 16SrVIII 16SrIV 16SrX 16SrI 16SrXII 16SrXIII 16SrII (DQ305977) (DQ3058983) (DQ305982) (DQ305980) (DQ305979) (DQ305978)
 
Napier Head Smut Disease Napier smut (NHS) due to infection by  Ustilago kamerunensis .
Smut Symptoms ,[object Object],[object Object],[object Object]
Provision of isolates ,[object Object]
Source of isolates ,[object Object],[object Object]
Isolate purification ,[object Object],[object Object]
Ustilago cynodontis From smutted  Cynodon , Ethiopia, 2007 Putative  U. kamerunensis From Kenya, 2007 Cultural morphology 1
Mixture of budding and filamentous cells characteristic of smut fungus Cultural morphology 2 . Microscopic characters
Molecular Identification of  Ustilago   kamerunensis PCR amplifications from  U. kamerunensis  (2-4, 6-8, 10-12) and  U. cynodontis  (5, 9, 13) with primers targeting the   -tubulin gene (F1/R2, 2-5; and F2/R1, 10-13) and ITS region (ITS1/4, 6-9).  Lanes 14-16. Positive controls group 16SrIII and 16SrXI (16).  More data can be obtained from authors 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17
Hybridization signals from PCR products from Kenyan (UK) isolates with the   -tubulin probe.
NHS-infected Napier source plants (Kenya)
Uniformly smutted inflorescences of field-infected Napier plants
Distorted inflorescence
NG-1 month- post-inoculated plants
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
PCR amplicons from inoculated plants using   -tubulin primers U U cynodontis  reference  U. kamerunensis Plant  Control samples
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Draft diagnostic lab manual Edition 3
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

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