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Incentivising Biodiversity Data
Publishing: GBIF-Pensoft
Partnership
Vishwas Chavan 1 , Lyubomir Penev 2,3 , Teodor Georgiev 3
1 Global Biodiversity Information Facility, Copenhagen, Denmark (
vchavan@gbif.org )
2 Institute for Biodiversity and Ecosystem Research, Bulgarian Academy of
Sciences , 2 Gagarin Str., 1113 Sofia, Bulgaria
3 Pensoft Publishers, 13a Geo Milev Str., Sofia, Bulgaria
 

TDWG Florence, 27 Oct - 1 Nov 2013

ViBRANT
Multiple Data Publishing Model
1.
2.
3.

4.

Supplementary data files published along with an article
Data deposited at specialized data repositories (Dryad,
Pangaea) and linked to the article
Data published through data repositories according to a
standard but indexed and collated with other data
(GenBank, GBIF IPT)
Integrated narrative (text) and data publishing
The problem ?
Low uptake of open data publishing/sharing
As a result, data often get lost!

Primary data
A solution?
Data Paper is a scholarly journal
publication whose primary purpose
is to describe a dataset or a group
of datasets, rather than to report a
research investigation.
Data papers
Provide a citable journal publication that
brings scholarly credit to data publishers
Describe the data in a structured humanreadable form
Bring the existence of the data to the
attention of the scholarly community
How it started
Incentivising Biodiversity Data Publishing: GBIF-Pensoft Partnership
Metadata based on the
Ecological Metadata
Language (EML)
Data papers from GBIF IPT

IPT
Data publised through
Data Papers
Incentivising Biodiversity Data Publishing: GBIF-Pensoft Partnership
Incentivising Biodiversity Data Publishing: GBIF-Pensoft Partnership
Incentivising Biodiversity Data Publishing: GBIF-Pensoft Partnership
Incentivising Biodiversity Data Publishing: GBIF-Pensoft Partnership
Growth
Next generation integrated text and
data publishing
Harvesting data straight from
article
Acknowledgements

ViBRANT

PLAZI

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Incentivising Biodiversity Data Publishing: GBIF-Pensoft Partnership

  • 1. Incentivising Biodiversity Data Publishing: GBIF-Pensoft Partnership Vishwas Chavan 1 , Lyubomir Penev 2,3 , Teodor Georgiev 3 1 Global Biodiversity Information Facility, Copenhagen, Denmark ( vchavan@gbif.org ) 2 Institute for Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences , 2 Gagarin Str., 1113 Sofia, Bulgaria 3 Pensoft Publishers, 13a Geo Milev Str., Sofia, Bulgaria   TDWG Florence, 27 Oct - 1 Nov 2013 ViBRANT
  • 2. Multiple Data Publishing Model 1. 2. 3. 4. Supplementary data files published along with an article Data deposited at specialized data repositories (Dryad, Pangaea) and linked to the article Data published through data repositories according to a standard but indexed and collated with other data (GenBank, GBIF IPT) Integrated narrative (text) and data publishing
  • 4. Low uptake of open data publishing/sharing
  • 5. As a result, data often get lost! Primary data
  • 7. Data Paper is a scholarly journal publication whose primary purpose is to describe a dataset or a group of datasets, rather than to report a research investigation.
  • 8. Data papers Provide a citable journal publication that brings scholarly credit to data publishers Describe the data in a structured humanreadable form Bring the existence of the data to the attention of the scholarly community
  • 11. Metadata based on the Ecological Metadata Language (EML)
  • 12. Data papers from GBIF IPT IPT
  • 19. Next generation integrated text and data publishing
  • 20. Harvesting data straight from article