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What is Biology?

Prepared by Ana Carla T. Villarmente
Biology
•   “bios” = life
•   “logus” = study
•   BIOLOGY = study of life
•   The study of life
    extends from the
    microscopic scale of the
    molecules and cells that
    make up organisms to
    the global scale of the
    entire living planet.
Branches of Biology
•   Anatomy                  • Histology- cells and
•   Biochemistry               tissue
•   Biotechnology            • Ichthyology- fish
•   Botany                   • Microbiology-
•                              microorganisms
    Cell Biology/ cytology
                             • Ornithology-birds
•   Ecology
•                            • Pathology- diseases
    Entomology
                             • Taxonomy- naming and
•   Genetics
                               classification, etc. etc
Characteristics of Living Things
                • Order
                • Evolutionary adaptation
                • Response to the
                  environment
                • Regulation
                • Energy processing
                • Growth and
                  development
                • Reproduction
Levels of Biological Organization
Biosphere= all ecosystems

Ecosystem= consists of all organisms living
in a particular area, as well as the
nonliving, physical components of the
environment

Community= consists of various
populations of organisms living together
in a given area

Population= a group of organisms of the
same species in any given area.

Organism= within a population there are
organisms, just one of those organisms is
called an organism. For example, within a
population of lions, there is a lion.
Levels of Biological
                      Organization.p2
Organ system= consists of different organs
 that work together for a specific function.

 Organ= consists of different tissues that
 function together to do a certain job

 Tissue= consists of similar cells that work
 together

 Cell= the smallest unit of life that is able to
 carry out all the functions of living things

 Molecule= consists of different atoms. For
 example, DNA, within DNA there are
 oxygen atoms and different proteins.

 Atom= the smallest unit of matter that has
 the chemical properties of a particular
 element.
Chemical Foundations of Biology
• Organic molecules
a. Carbohydrates
b. Protein
c. Nucleic acid
d. Fats and lipids
• Inorganic molecules
• Vitamins
• Elements
• Water
Organic molecules
Inorganic molecules
Parts of the cell
• 3 main parts:
   1. Plasma membrane
   2. Cytoplasm and
      organelles
   3. nucleus
Parts of the cell

1.Plasma membrane or
cell membrane          • All cells are protected by a
                         membrane called the cell
                         membrane. Plant cells
                         however also have a cell
                         wall in addition...
                       • It is the outermost cell
                         surface which separates the
                         cell from the external
                         environment
2. Cytoplasm and organelles

                                •   a. Endoplasmic Reticulum - The
• The functions of animal           endoplasmic reticulum is a
  cell are all carried out by       network for transportation of
                                    certain critical substances in and
  the different cell                out of the nucleus. The
  organelles. These cell            endoplasmic reticulum is seen
  organelles function as a          like a network of interconnecting
                                    pathways to enable the transport
  unit and regulate the             of molecules. There are two kinds
  activities of the cell on         of ER, namely Rough ER and
                                    Smooth ER. Rough ER has
  the whole. The different          ribosome molecules attached to
  cell organelles present in        its surface while the smooth ER
  an animal cell are                does not have ribosome
                                    molecules attached to its surface.
• b. Golgi Apparatus - The Golgi
                                     • c. Lysosomes - Lysosomes are
  apparatus is involved with
  processing and packaging of          referred to as suicide bags of
  the molecules synthesized by         the cell. They are involved in
  the cell mainly the proteins         clearing the unwanted and
  ready for secretion. The ER
  transports the proteins in their     waste materials from the cell.
  crude form to the golgi              The lysosomes contain
  apparatus. The golgi apparatus       hydrolytic enzymes that are
  packages the proteins                destructive. they kill the toxic
  developing them into primary,
  secondary and tertiary               materials of the cell time to
  proteins respectively.               time. They engulf materials
                                       like damaged organelles, virus,
                                       bacteria and food particles.
• d. Mitochondria/
  mitochondrion - The
  mitochondria is also referred
  to as the power house of the    e. Ribosomes - The Ribosome
  cell. It is a double membrane   is involved in protein
  organelle that helps in
  energy production for the       synthesis. It consists of two
  cell. The energy is generated   sub units. Protein synthesis
  in the form of ATP.             primarily occurs in the
  Mitochondria also has its
  own genetic material called     ribosomes. The ribosomes
  the mitochondrial DNA           may be found freely floating
  which is circular. The energy   in the cytoplasm or may be
  is generated from the
  glucose we take in by a         found attached to the ER.
  process called the cellular
  respiration.
Functions of the Cell

• g. Vacuole - The vacuole is a   h. Cytoskeleton
  large empty storage             • An interconnected system
  organelle. They store excess       of fibers, threads and
  water or food. It is present       interwoven molecules that
  in many numbers within the         give structure to the cell
  cell floating in the            • Main components:
  cytoplasm. (More                   microtubules,
  discussion in plant cells)         microfilaments, and
                                     intermediate filaments. All
                                     are assembled from
                                     subunits of protein.
h. Cytoskeleton                • i. Centriole
• An interconnected system     • It is a cylinder-like structure
   of fibers, threads and        that occurs in pairs
   interwoven molecules that   • Centrioles function in cell
   give stucture to the cell     division
• The cells perform various activities with the aid of the many
  cell organelles. These cells function together as a unit and
  form tissue, for example Muscle tissue ( cluster of muscle
  cells ), A group of similar tissues join together to form an
  Organ for example stomach, Liver etc. A group of similarly
  functioning organs group together to form an organ system
  for example Digestive system, Respiratory system.
• Thus, these cells very tiny and invisible to the naked eye
  perform all the activities in coordination with the other body
  cells and help the organism survive.
3. Cell Nucleus

•   1. Cell Nucleus - The nucleus is
    referred to as the heart of the
    cell. The nucleus houses the
    genetic material of the organism
    which is the DNA. DNA
    replication and RNA synthesis
    occurs in the nucleus. It regulates
    the activities of the other cell
    organelles thus a very important      The double helix: DNA or
    cell organelle. The cell nucleus is
    bound by a definite membrane          deoxyribonucleic acid make up
    called the nuclear membrane           the chromosomes and are the
    that separates the nucleus from       base of the genetic code.
    the cytoplasm.
The discovery of the double elix
• The realization that the
  structure of DNA is that of a
  double-helix by which
  genetic information is
                                  James D. Watson,
  stored and copied in living
                                  Francis Crick, and
  organisms is widely
                                  Maurice Wilkins each
  considered one of the most
                                  received one third of
  important scientific
                                  the 1962
  discoveries of the 20th
                                  Nobel Prize in Physiology or M
  century..
                                   for their contributions
                                  to the discovery
Plant cells are larger than animal cells
• Plant cells can be larger than animal cells
• Normal range for an animal cell: from 10 to
  30 micrometers
• Plant cell: from 10 to 100 micrometers.
• Main structural differences between plant and
  animal cells: additional structures found in
  plant cells. These structures include:
  chloroplasts, the cell wall, and vacuoles.
Chloroplasts


•   Plant cells use sunlight as their
    energy source; the sunlight must be
    converted into energy inside the
    cell in a process called
    photosynthesis. Chloroplasts are
    the structures that perform this
    function. They are rather large,
    double membrane-bound
    structures (about 5 micrometers
    across) that contain the substance
    chlorophyll, which absorbs sunlight.
    Additional membranes within the        (In animal cells, the mitochondria
    chloroplast contain the structures     produces the majority of the cells
    that actually carry out                energy from food. It does not have
    photosynthesis.                        the same function in plant cells).
Vacuoles


•   Vacuoles are large, liquid-filled
    organelles found only in plant cells.
    Vacuoles can occupy up to 90% of a
    cell's volume and have a single
    membrane. Their main function is
    as a space-filler in the cell, but they
    can also fill digestive functions
    similar to lysosomes (which are also
    present in plant cells). Vacuoles
    contain a number of enzymes that
    perform diverse functions, and
    their interiors can be used as
    storage for nutrients or, as
    mentioned, provide a place to
    degrade unwanted substances.
The Cell Wall


• Another structural
  difference between in plant
  cells is the presence of a
  rigid cell wall surrounding
  the cell membrane. This
  wall can range from 0.1 to
  10 micrometers thick and is
  composed of fats and
  sugars. The tough wall gives
  added stability and
  protection to the plant cell.
The Microscope and Microscopy
• Microscope – a tool in
  Biology
• Microscopy – is a
  technique in used to
  examine         biological
  structure, function, and
  procceses. Uses different
  types of microscopes,
  specimen and stains.
• « Discovery in Science is
  parallel to the invention
  of tools. »
– Phase and Contrast
                                                  microscope – is an optical
                                                  microscopy illumination
                                                  technique in which small
                                                  phase shifts in the light
                                                  passing through a
                                                  transparent specimen are
                                                  converted into contrast
                                                  changes in the image.
                                            • Electron microscope - is a
                                              type of microscope that
                                              uses a particle beam of
                                              electrons to illuminate the
                                              specimen and produce a
                                              magnified image. There are
                                              two types: Scanning
                                              Electron microscope (SEM)
                                              and Transmission Electron
Scanning electron microscope image of an      Microscope (TEM).
ant. Its eye is approximately 300 microns
wide. (Dartmouth Electron Microscope
Facility/Dartmouth College)
The Cell – the basic unit of life
Type of      Size         DNA          Complexity Example
Cell

Eukaryotic   Large        True         Complex       Human

Eubacteria   Small        Circular     Simple        Bacteria

Archaea      Small        Circular     Simple        Thermophil
                                                     ic bacteria


3 domains of Life (Three types) : Eukaryotic, Eubacteria, Archaea
Transport in & out of the cell
     •Two kinds : passive and active

Type of transport   Passive             Active

Driving energy      Kinetic             ATP

Types               Diffusion, Osmosis, Electron pump, Co-
                    Facilitated diffusion, transport,
                                           exocytosis,
                                           endocytosis,
                                           pinocytosis,

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Atv what is biology

  • 1. What is Biology? Prepared by Ana Carla T. Villarmente
  • 2. Biology • “bios” = life • “logus” = study • BIOLOGY = study of life • The study of life extends from the microscopic scale of the molecules and cells that make up organisms to the global scale of the entire living planet.
  • 3. Branches of Biology • Anatomy • Histology- cells and • Biochemistry tissue • Biotechnology • Ichthyology- fish • Botany • Microbiology- • microorganisms Cell Biology/ cytology • Ornithology-birds • Ecology • • Pathology- diseases Entomology • Taxonomy- naming and • Genetics classification, etc. etc
  • 4. Characteristics of Living Things • Order • Evolutionary adaptation • Response to the environment • Regulation • Energy processing • Growth and development • Reproduction
  • 5. Levels of Biological Organization Biosphere= all ecosystems Ecosystem= consists of all organisms living in a particular area, as well as the nonliving, physical components of the environment Community= consists of various populations of organisms living together in a given area Population= a group of organisms of the same species in any given area. Organism= within a population there are organisms, just one of those organisms is called an organism. For example, within a population of lions, there is a lion.
  • 6. Levels of Biological Organization.p2 Organ system= consists of different organs that work together for a specific function. Organ= consists of different tissues that function together to do a certain job Tissue= consists of similar cells that work together Cell= the smallest unit of life that is able to carry out all the functions of living things Molecule= consists of different atoms. For example, DNA, within DNA there are oxygen atoms and different proteins. Atom= the smallest unit of matter that has the chemical properties of a particular element.
  • 7. Chemical Foundations of Biology • Organic molecules a. Carbohydrates b. Protein c. Nucleic acid d. Fats and lipids • Inorganic molecules • Vitamins • Elements • Water
  • 10. Parts of the cell • 3 main parts: 1. Plasma membrane 2. Cytoplasm and organelles 3. nucleus
  • 11. Parts of the cell 1.Plasma membrane or cell membrane • All cells are protected by a membrane called the cell membrane. Plant cells however also have a cell wall in addition... • It is the outermost cell surface which separates the cell from the external environment
  • 12. 2. Cytoplasm and organelles • a. Endoplasmic Reticulum - The • The functions of animal endoplasmic reticulum is a cell are all carried out by network for transportation of certain critical substances in and the different cell out of the nucleus. The organelles. These cell endoplasmic reticulum is seen organelles function as a like a network of interconnecting pathways to enable the transport unit and regulate the of molecules. There are two kinds activities of the cell on of ER, namely Rough ER and Smooth ER. Rough ER has the whole. The different ribosome molecules attached to cell organelles present in its surface while the smooth ER an animal cell are does not have ribosome molecules attached to its surface.
  • 13. • b. Golgi Apparatus - The Golgi • c. Lysosomes - Lysosomes are apparatus is involved with processing and packaging of referred to as suicide bags of the molecules synthesized by the cell. They are involved in the cell mainly the proteins clearing the unwanted and ready for secretion. The ER transports the proteins in their waste materials from the cell. crude form to the golgi The lysosomes contain apparatus. The golgi apparatus hydrolytic enzymes that are packages the proteins destructive. they kill the toxic developing them into primary, secondary and tertiary materials of the cell time to proteins respectively. time. They engulf materials like damaged organelles, virus, bacteria and food particles.
  • 14. • d. Mitochondria/ mitochondrion - The mitochondria is also referred to as the power house of the e. Ribosomes - The Ribosome cell. It is a double membrane is involved in protein organelle that helps in energy production for the synthesis. It consists of two cell. The energy is generated sub units. Protein synthesis in the form of ATP. primarily occurs in the Mitochondria also has its own genetic material called ribosomes. The ribosomes the mitochondrial DNA may be found freely floating which is circular. The energy in the cytoplasm or may be is generated from the glucose we take in by a found attached to the ER. process called the cellular respiration.
  • 15. Functions of the Cell • g. Vacuole - The vacuole is a h. Cytoskeleton large empty storage • An interconnected system organelle. They store excess of fibers, threads and water or food. It is present interwoven molecules that in many numbers within the give structure to the cell cell floating in the • Main components: cytoplasm. (More microtubules, discussion in plant cells) microfilaments, and intermediate filaments. All are assembled from subunits of protein.
  • 16. h. Cytoskeleton • i. Centriole • An interconnected system • It is a cylinder-like structure of fibers, threads and that occurs in pairs interwoven molecules that • Centrioles function in cell give stucture to the cell division
  • 17. • The cells perform various activities with the aid of the many cell organelles. These cells function together as a unit and form tissue, for example Muscle tissue ( cluster of muscle cells ), A group of similar tissues join together to form an Organ for example stomach, Liver etc. A group of similarly functioning organs group together to form an organ system for example Digestive system, Respiratory system. • Thus, these cells very tiny and invisible to the naked eye perform all the activities in coordination with the other body cells and help the organism survive.
  • 18. 3. Cell Nucleus • 1. Cell Nucleus - The nucleus is referred to as the heart of the cell. The nucleus houses the genetic material of the organism which is the DNA. DNA replication and RNA synthesis occurs in the nucleus. It regulates the activities of the other cell organelles thus a very important The double helix: DNA or cell organelle. The cell nucleus is bound by a definite membrane deoxyribonucleic acid make up called the nuclear membrane the chromosomes and are the that separates the nucleus from base of the genetic code. the cytoplasm.
  • 19. The discovery of the double elix • The realization that the structure of DNA is that of a double-helix by which genetic information is James D. Watson, stored and copied in living Francis Crick, and organisms is widely Maurice Wilkins each considered one of the most received one third of important scientific the 1962 discoveries of the 20th Nobel Prize in Physiology or M century.. for their contributions to the discovery
  • 20.
  • 21. Plant cells are larger than animal cells • Plant cells can be larger than animal cells • Normal range for an animal cell: from 10 to 30 micrometers • Plant cell: from 10 to 100 micrometers. • Main structural differences between plant and animal cells: additional structures found in plant cells. These structures include: chloroplasts, the cell wall, and vacuoles.
  • 22. Chloroplasts • Plant cells use sunlight as their energy source; the sunlight must be converted into energy inside the cell in a process called photosynthesis. Chloroplasts are the structures that perform this function. They are rather large, double membrane-bound structures (about 5 micrometers across) that contain the substance chlorophyll, which absorbs sunlight. Additional membranes within the (In animal cells, the mitochondria chloroplast contain the structures produces the majority of the cells that actually carry out energy from food. It does not have photosynthesis. the same function in plant cells).
  • 23. Vacuoles • Vacuoles are large, liquid-filled organelles found only in plant cells. Vacuoles can occupy up to 90% of a cell's volume and have a single membrane. Their main function is as a space-filler in the cell, but they can also fill digestive functions similar to lysosomes (which are also present in plant cells). Vacuoles contain a number of enzymes that perform diverse functions, and their interiors can be used as storage for nutrients or, as mentioned, provide a place to degrade unwanted substances.
  • 24. The Cell Wall • Another structural difference between in plant cells is the presence of a rigid cell wall surrounding the cell membrane. This wall can range from 0.1 to 10 micrometers thick and is composed of fats and sugars. The tough wall gives added stability and protection to the plant cell.
  • 25. The Microscope and Microscopy
  • 26. • Microscope – a tool in Biology • Microscopy – is a technique in used to examine biological structure, function, and procceses. Uses different types of microscopes, specimen and stains. • « Discovery in Science is parallel to the invention of tools. »
  • 27.
  • 28. – Phase and Contrast microscope – is an optical microscopy illumination technique in which small phase shifts in the light passing through a transparent specimen are converted into contrast changes in the image. • Electron microscope - is a type of microscope that uses a particle beam of electrons to illuminate the specimen and produce a magnified image. There are two types: Scanning Electron microscope (SEM) and Transmission Electron Scanning electron microscope image of an Microscope (TEM). ant. Its eye is approximately 300 microns wide. (Dartmouth Electron Microscope Facility/Dartmouth College)
  • 29. The Cell – the basic unit of life Type of Size DNA Complexity Example Cell Eukaryotic Large True Complex Human Eubacteria Small Circular Simple Bacteria Archaea Small Circular Simple Thermophil ic bacteria 3 domains of Life (Three types) : Eukaryotic, Eubacteria, Archaea
  • 30. Transport in & out of the cell •Two kinds : passive and active Type of transport Passive Active Driving energy Kinetic ATP Types Diffusion, Osmosis, Electron pump, Co- Facilitated diffusion, transport, exocytosis, endocytosis, pinocytosis,