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Brian Simulator
  (a draft)
               Speaker : Tony Tseng, Jimmy Lu
                    Advisor : Hsing Mei

          Web Computing Laboratory(WECO Lab)
  Computer Science and Information Engineering Department
                  Fu Jen Catholic University
Outline
 Graph Theoretical Analysis in AD
 Disconnection Syndrome
 Brain Simulator—a draft
           Purpose
           Basic structure
           Brain features
           Proposed brain simulator


                          WECO Lab, CSIE dept., FJU
2010/5/28                                             2
                           http://www.weco.net
Graph Theoretical
            Analysis in AD


              WECO Lab, CSIE dept., FJU
2010/5/28                                 3
               http://www.weco.net
Introduction
 AD as a Disconnection Syndrome
 Two problems need further attention
      Assessment of functional connectivity with EEG
       and MEG can be biased by volume conduction
      Lack a framework to discriminate between
       normal and abnormal networks in the brain
 Today’s talk will focus on the theoretical
  framework

                      WECO Lab, CSIE dept., FJU
2010/5/28                                               4
                       http://www.weco.net
Graph Analysis
 Brain disease or aging gives rise to a
  deviation from the small world
  configuration of brain network
 Weighted graph reflects
  the strength of the relation
  between two vertices.



                   WECO Lab, CSIE dept., FJU
2010/5/28                                      5
                    http://www.weco.net
Network Damage Models
 The Random Failure Model
      Network changes are due to a random decrease
       in strength of edges
 The Targeted Attack Model
      Edges connecting hubs will be more vulnerable
       to attack
 Our proposed Model
      Aging Model
      Disease-specific network change model
                      WECO Lab, CSIE dept., FJU
2010/5/28                                              6
                       http://www.weco.net
Damage modeling procedure

                WECO Lab, CSIE dept., FJU
2010/5/28                                   7
                 http://www.weco.net
Result analysis - weighted MEG graphs

                     WECO Lab, CSIE dept., FJU
2010/5/28                                           8
                      http://www.weco.net
Result analysis - Comparison of normalized weighted clustering coefficient (left
                         panel) and path length (right panel)

                                  WECO Lab, CSIE dept., FJU
2010/5/28                                                                              9
                                   http://www.weco.net
Disconnection
            Syndrome


              WECO Lab, CSIE dept., FJU
2010/5/28                                 10
               http://www.weco.net
Disconnection Syndrome
 The classical associationist era
      Karl Wernicke’s school: associationism
      Fundamental psychic elements or memory
       images
      Higher functions were not localized in specific
       regions but were the result of associative
       connections between motor and sensory
       memory image area
      No cortical specializations

                       WECO Lab, CSIE dept., FJU
2010/5/28                                                11
                        http://www.weco.net
The Classical Disconnection Syndrome

                     WECO Lab, CSIE dept., FJU
2010/5/28                                          12
                      http://www.weco.net
Disconnection Syndrome
 Geschwind’s neo-associationism
      Shift away from pure holism
      Flechsig’s rule: association cortex acted, in
       effect, as an obligatory relay between different
       brain regions and that a lesion to it would serve
       to disconnect them
      A comparative phylogenetic perspective to the
       development of associations


                       WECO Lab, CSIE dept., FJU
2010/5/28                                              13
                        http://www.weco.net
Geschwind’s view of the evolution of cross-modality associations

                                  WECO Lab, CSIE dept., FJU
2010/5/28                                                                      14
                                   http://www.weco.net
Geschwind’s disconnection syndromes

                     WECO Lab, CSIE dept., FJU
2010/5/28                                         15
                      http://www.weco.net
Disconnection Syndrome
 Disconnection syndromes after Geschwind
      Weakness of Geschwind’s theory
             Extended territories composed of many specialized
              cortical subregions serving different but related
              functions
             Feed-back and parallel pathways
      Hodotopic framwork
             Topological mechanism (place)
             Hodological mechanism (road or path)
             Hyperconnection and cortical hyperfunction
                            WECO Lab, CSIE dept., FJU
2010/5/28                                                         16
                             http://www.weco.net
A hodotopic framwork for clinicopathological correlations

                               WECO Lab, CSIE dept., FJU
2010/5/28                                                               17
                                http://www.weco.net
Brain simulator
            (a draft)


              WECO Lab, CSIE dept., FJU
2010/5/28                                 18
               http://www.weco.net
What is the purpose?
 Short term: Provide an information about
  how the Alzheimer’s disease effects brain
  structural and functional connectivity
 Medium term: extend the models to brain
  diseases
 Long term: whole brain models including
  sleep


                 WECO Lab, CSIE dept., FJU
2010/5/28                                     19
                  http://www.weco.net
It is based on...
   Three types of brain network (structure)
   Neural Darwin selection (development)
   Hodotopic framwork (syndrome/function)
   Default-mode network/resting state (state)
   Four stage of Alzheimer’s disease (time)
   Hypothesis of Alzheimer’s disease
   Damage model (topology)

                   WECO Lab, CSIE dept., FJU
2010/5/28                                      20
                    http://www.weco.net
Selection of brain features
   Self-organized
   Degeneracy
   Parallel distributed processing (PDP)
   Small-world, scale free, random topology
   Feed forward and back
   Reconfigurations toward damages
   Balance and Dynamics

                   WECO Lab, CSIE dept., FJU
2010/5/28                                      21
                    http://www.weco.net
How does it work?

  fMRI




  EEG/
  MEG




psycho-                                  Proposed Brain
metrics                                    Simulator




             WECO Lab, CSIE dept., FJU
 2010/5/28                                                22
              http://www.weco.net
Thalamo-            Polysynaptic                 Diffuse
       cortical motif       loop structure              ascending      Space
                                                        projections

                   Network Development Model
       Developmental         Experiential              Reentrant
         Selection            Selection                Mapping
                                                                       Time

                  Network Aging           Network
                     Model              Damage Model


                        Decision Making Model                          Balance
                                                                          &
                                                                      Dynamics


                               Proposed brain simulator

                                   WECO Lab, CSIE dept., FJU
2010/5/28                                                                        23
                                    http://www.weco.net
Reference
 [1] C. J. Stam, W. de Haan, A. Daffertshofer, B. F. Jones, I. Manshanden,
  A. M. van Cappellen van Walsum, T. Montez, J. P. A. Verbunt, J. C. de
  Munck, B. W. van Dijk, H. W. Berendse and P. Scheltens, “Graph
  theoretical analysis of magnetoencephalographic functional
  connectivity in Alzheimer’s disease”, Brain 2009: 132; 213–224
 [2] Marco Catani, Dominic H. ffytche, “The rises and falls of
  disconnection syndromes”, Brain 2005: 128, 2224–2239
 [3] “Alzheimer's disease ”, Wikipedia
  http://en.wikipedia.org/wiki/Alzheimer's_disease
 [4] Gerald M. Edelman, “Wider than the Sky: The Phenomenal Gift of
  Consciousness”, Yale University Press (March 10, 2004)




                              WECO Lab, CSIE dept., FJU
2010/5/28                                                                     24
                               http://www.weco.net

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Brian Simulator (a draft)

  • 1. Brian Simulator (a draft) Speaker : Tony Tseng, Jimmy Lu Advisor : Hsing Mei Web Computing Laboratory(WECO Lab) Computer Science and Information Engineering Department Fu Jen Catholic University
  • 2. Outline  Graph Theoretical Analysis in AD  Disconnection Syndrome  Brain Simulator—a draft  Purpose  Basic structure  Brain features  Proposed brain simulator WECO Lab, CSIE dept., FJU 2010/5/28 2 http://www.weco.net
  • 3. Graph Theoretical Analysis in AD WECO Lab, CSIE dept., FJU 2010/5/28 3 http://www.weco.net
  • 4. Introduction  AD as a Disconnection Syndrome  Two problems need further attention  Assessment of functional connectivity with EEG and MEG can be biased by volume conduction  Lack a framework to discriminate between normal and abnormal networks in the brain  Today’s talk will focus on the theoretical framework WECO Lab, CSIE dept., FJU 2010/5/28 4 http://www.weco.net
  • 5. Graph Analysis  Brain disease or aging gives rise to a deviation from the small world configuration of brain network  Weighted graph reflects the strength of the relation between two vertices. WECO Lab, CSIE dept., FJU 2010/5/28 5 http://www.weco.net
  • 6. Network Damage Models  The Random Failure Model  Network changes are due to a random decrease in strength of edges  The Targeted Attack Model  Edges connecting hubs will be more vulnerable to attack  Our proposed Model  Aging Model  Disease-specific network change model WECO Lab, CSIE dept., FJU 2010/5/28 6 http://www.weco.net
  • 7. Damage modeling procedure WECO Lab, CSIE dept., FJU 2010/5/28 7 http://www.weco.net
  • 8. Result analysis - weighted MEG graphs WECO Lab, CSIE dept., FJU 2010/5/28 8 http://www.weco.net
  • 9. Result analysis - Comparison of normalized weighted clustering coefficient (left panel) and path length (right panel) WECO Lab, CSIE dept., FJU 2010/5/28 9 http://www.weco.net
  • 10. Disconnection Syndrome WECO Lab, CSIE dept., FJU 2010/5/28 10 http://www.weco.net
  • 11. Disconnection Syndrome  The classical associationist era  Karl Wernicke’s school: associationism  Fundamental psychic elements or memory images  Higher functions were not localized in specific regions but were the result of associative connections between motor and sensory memory image area  No cortical specializations WECO Lab, CSIE dept., FJU 2010/5/28 11 http://www.weco.net
  • 12. The Classical Disconnection Syndrome WECO Lab, CSIE dept., FJU 2010/5/28 12 http://www.weco.net
  • 13. Disconnection Syndrome  Geschwind’s neo-associationism  Shift away from pure holism  Flechsig’s rule: association cortex acted, in effect, as an obligatory relay between different brain regions and that a lesion to it would serve to disconnect them  A comparative phylogenetic perspective to the development of associations WECO Lab, CSIE dept., FJU 2010/5/28 13 http://www.weco.net
  • 14. Geschwind’s view of the evolution of cross-modality associations WECO Lab, CSIE dept., FJU 2010/5/28 14 http://www.weco.net
  • 15. Geschwind’s disconnection syndromes WECO Lab, CSIE dept., FJU 2010/5/28 15 http://www.weco.net
  • 16. Disconnection Syndrome  Disconnection syndromes after Geschwind  Weakness of Geschwind’s theory  Extended territories composed of many specialized cortical subregions serving different but related functions  Feed-back and parallel pathways  Hodotopic framwork  Topological mechanism (place)  Hodological mechanism (road or path)  Hyperconnection and cortical hyperfunction WECO Lab, CSIE dept., FJU 2010/5/28 16 http://www.weco.net
  • 17. A hodotopic framwork for clinicopathological correlations WECO Lab, CSIE dept., FJU 2010/5/28 17 http://www.weco.net
  • 18. Brain simulator (a draft) WECO Lab, CSIE dept., FJU 2010/5/28 18 http://www.weco.net
  • 19. What is the purpose?  Short term: Provide an information about how the Alzheimer’s disease effects brain structural and functional connectivity  Medium term: extend the models to brain diseases  Long term: whole brain models including sleep WECO Lab, CSIE dept., FJU 2010/5/28 19 http://www.weco.net
  • 20. It is based on...  Three types of brain network (structure)  Neural Darwin selection (development)  Hodotopic framwork (syndrome/function)  Default-mode network/resting state (state)  Four stage of Alzheimer’s disease (time)  Hypothesis of Alzheimer’s disease  Damage model (topology) WECO Lab, CSIE dept., FJU 2010/5/28 20 http://www.weco.net
  • 21. Selection of brain features  Self-organized  Degeneracy  Parallel distributed processing (PDP)  Small-world, scale free, random topology  Feed forward and back  Reconfigurations toward damages  Balance and Dynamics WECO Lab, CSIE dept., FJU 2010/5/28 21 http://www.weco.net
  • 22. How does it work? fMRI EEG/ MEG psycho- Proposed Brain metrics Simulator WECO Lab, CSIE dept., FJU 2010/5/28 22 http://www.weco.net
  • 23. Thalamo- Polysynaptic Diffuse cortical motif loop structure ascending Space projections Network Development Model Developmental Experiential Reentrant Selection Selection Mapping Time Network Aging Network Model Damage Model Decision Making Model Balance & Dynamics Proposed brain simulator WECO Lab, CSIE dept., FJU 2010/5/28 23 http://www.weco.net
  • 24. Reference  [1] C. J. Stam, W. de Haan, A. Daffertshofer, B. F. Jones, I. Manshanden, A. M. van Cappellen van Walsum, T. Montez, J. P. A. Verbunt, J. C. de Munck, B. W. van Dijk, H. W. Berendse and P. Scheltens, “Graph theoretical analysis of magnetoencephalographic functional connectivity in Alzheimer’s disease”, Brain 2009: 132; 213–224  [2] Marco Catani, Dominic H. ffytche, “The rises and falls of disconnection syndromes”, Brain 2005: 128, 2224–2239  [3] “Alzheimer's disease ”, Wikipedia http://en.wikipedia.org/wiki/Alzheimer's_disease  [4] Gerald M. Edelman, “Wider than the Sky: The Phenomenal Gift of Consciousness”, Yale University Press (March 10, 2004) WECO Lab, CSIE dept., FJU 2010/5/28 24 http://www.weco.net