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Biblissima’s Choices of Tools and Methodology
for Interoperability Purposes
Eduard FRUNZEANU
Régis ROBINEAU
Équipex Biblissima
http://biblissima-condorcet.fr
5th HÉLOÏSE WORKSHOP
Madrid, 19-21 October 2015
New technologies for a new library
Partners and challenges
Around 40 databases with DATA and IMAGES
codicology
catalography
manuscript transmission
Esprit	
  des	
  livres	
  
(ENC)	
  
Codicologia	
  
(IRHT)	
  
Bibale	
  
(IRHT)	
  
BnF	
  Archives	
  et	
  Manuscrits	
   Pinakes	
  
(IRHT)	
  
Reliures	
  
(BnF)	
  
Partners and challenges
Around 40 databases with DATA and IMAGES
iconography prosopography
Mandragore	
  
(BnF)	
  
IniBale	
  
(IRHT)	
  
textual corpora
Bibliothèque	
  Virtuelles	
  Humanistes	
  
(CESR)	
  
Prosopographie	
  des	
  inventaires	
  
(MRSH	
  Caen)	
  
BUDE	
  
(IRHT)	
  
Sermones	
  
(CIHAM)	
  
Solutions and tools to handle and build
interoperability of DATA & IMAGES
❖  Ontology (based on CIDOC-CRM and FRBRoo)
❖  Thesaurus/ Authority File (Ginco / BaseX)
❖  Viewer (Mirador)
❖  Semantic Web Application Framework (CubicWeb)
Building the Thesaurus / Authority File
•  Thesaurus:
– Types of data:
•  geographical names
•  iconographical descriptors
•  specialised terminology (codicology, palaeography)
•  languages, etc.
•  Standard / Tool: SKOS / Ginco
•  Authority File:
–  Types of data:
•  persons and corporate bodies
•  works
–  Standard / Tool: XML-TEI / BaseX
Geographical Thesaurus
Types of geographical data:
•  descriptors: geographical places identified in miniatures
(historical, disappeared, fictional, non-identified, current)
•  places of origin: city or abbey where an item (manuscript or
printed work) was copied / edited / painted
•  holding institutions: archives, libraries, museums
Structure and format of geographical data:
•  hierarchical thesaurus or flat lists for the descriptors
•  places of origin associated with the relevant provinces,
countries and geographical areas
•  Country / City / Repository for the holding institutions
Starting point for Biblissima’s GeoThesaurus
2 datasets: Mandragore (BnF) & Initiale (IRHT)
Linked Data repositories & methods used for alignment:
•  automatic alignment, checked & manually corrected, to
geonames.org , data.bnf.fr (Map Department & Rameau),
dbpedia.org
•  manual alignment to specialised repositories: pleiades.stoa.org,
trismegistos.org, bibelwissenschaft.de
SKOS properties used to label the alignment and organise the
thesaurus: prefLabel, altLabel, broader, narrower, exactMatch,
closeMatch, relatedMatch
Hierarchical thesaurus in Mandragore (BnF)
Dewey
Classification
Administrative
division
(country &
department)
Physical
geography
Hierarchical thesaurus in Initiale (IRHT)
Hierarchy of Biblissima’s GeoThesaurus
I. General notions
II. Political geography (based on feature codes of Geonames)
A.  Geographical areas (= Dewey classification)
1.  Countries
a)  Counties
(1)  Cities
2.  Ancient cities and provinces
III. Physical geography (based on feature codes of Geonames)
A.  Continents B. Islands & Peninsulas C. Deserts & Oasis
D. Rivers, Lakes, Seas E. Mountains & Volcanos F. Forests & Parks
IV. Human constructions (based on feature codes of Geonames)
A.  Monasteries B. Castles & palaces C. Religious sites
D. Bridges E. Towers & fortresses
V. Fictional places
VI. Non-identified places
VII. Disappeared places
Integrating a geographical thesaurus into
CubicWeb application used to build the
Biblissima portal
MNMT, OBS, RLG
Geonames feature codes
Record for a geographic place
Get access to the data via a cartographic representation
http://nossl.demo.logilab.fr/biblissima/descr-map
Administrative interface of Ginco platform
Hierarchy and structure of geographical terms
Ginco-Diff: thesaurus page
Thesaurus URI: http://data.biblissima.fr/thesaurus/page/ark:/43093/b6957cdd-bade-4373-b058-ca63680ee39b
Ginco-Diff: concept page
Concept URI: http://data.biblissima.fr/thesaurus/page/ark:/43093/359ed56c-3026-4323-8bef-73abd11d4b04
Authority File
Data about persons:
-  Personal Name Heading
-  Alternative Name Forms
-  Gender
-  Date of birth / death
-  Place of birth / death
-  Titles / Relators
-  Works
-  Alignments with linked data repositories: data.bnf.fr, viaf.org
Relationships between persons (to be modelled in the near
future):
-  academic (master of / student of)
-  genealogical (father of / husband of)
-  institutional (friar of / member of)
-  intellectual (translator of / copyist of / editor of / illuminator of)
-  socio-cultural (dedicatee of / donor of / patron of / sponsor of)
Authority record in XML-TEI edited in XXE
framework
HTML page created from XML-TEI file
Identifier based on
the XML ID
Prosopographie des inventaires - Centre Michel de Boüard & MRSH de Caen
Other projects using XML-TEI / BaseX solution
Curate and enrich datasets
Operations:
•  identify identical items with different graphical forms
•  align with other linked data repositories:
–  data.bnf.fr - dbpedia.org
–  viaf.org - geonames.org
•  extract complementary information
•  dispatch the complementary information to the original datasets
Tools:
•  OpenRefine
•  GoogleXML
•  PHP scripts
OpenRefine: alignment with open source
linked data repositories
OpenRefine: clustering based on the
similarity of character strings
OpenRefine: clustering based on data.bnf.fr
URIs
OpenRefine: clustering based on VIAF IDs
SPARQL query to retrieve the personal name
heading for an author via data.bnf.fr/sparql
Alignment	
  of	
  the	
  database	
  graphical	
  form	
  
Abbo	
  Floriacensis	
  =	
  
hLp://data.bnf.fr/ark:/12148/cb12584637x	
  	
  
SPARQL query to retrieve alternative forms of
an author’s name via data.bnf.fr/sparql
Alignment	
  of	
  the	
  database	
  graphical	
  form	
  
Abbo	
  Floriacensis	
  =	
  
hLp://data.bnf.fr/ark:/12148/cb12584637x	
  	
  
SPARQL query to retrieve URIs from other
linked data repositories
Alignment	
  of	
  the	
  database	
  graphical	
  form	
  
Abbo	
  Floriacensis	
  =	
  
hLp://data.bnf.fr/ark:/12148/cb12584637x	
  	
  
SPARQL queries applied to an entire set of
data
Retrieve the personal name heading for an
author
Retrieve the variant forms for an author’s name
Extract URIs from other linked data
repositories
Retrieve other type of information
Biographical Note
Scientific works used for the
authority record
GoogleXML: extract information about an
author from HTML code
GoogleXML: identify the appropriate tags
Apply a GoogleXML formula to retrieve
alternative name forms
GoogleXML: extract geographical coordinates
(decimal degrees) from HTML code
GoogleXML: identify the appropriate tags
Apply a GoogleXML formula
PHP script
•  Input (CSV): list of places aligned with data.bnf
URIs
Get lat/long (Sparql query in the loop):
	
  
SELECT	
  ?concept	
  ?spatialThing	
  ?long	
  ?lat	
  WHERE	
  {	
  
?concept	
  skos:closeMatch	
  <".$uri.">	
  .	
  
	
  ?concept	
  foaf:focus	
  ?spatialThing	
  .	
  
	
  ?spatialThing	
  geo:long	
  ?long	
  .	
  
	
  ?spatialThing	
  geo:lat	
  ?lat	
  .	
  
}	
  
•  Output (CSV): source data enriched with
latitude/longitude coordinates
Using technical solutions to build a prototype
based on Initiale & Mandragore data
demos.biblissima-­‐condorcet.fr/prototype/	
  
One of the prototype’s main objectives: to build interoperability between two datasets
from the iconographical databases Initiale (IRHT) and Mandragore (BnF)
Aligning different forms of a name
•  Titus Livius / Database Mandragore (BnF) http://mandragore.bnf.fr
hLp://data.bnf.fr/ark:/12148/cb11886799m	
  
Aligning different forms of a name
•  Livius / Database Initiale (IRHT) http://initiale.irht.cnrs.fr
hLp://data.bnf.fr/ark:/12148/cb11886799m	
  
Find relevant results for data from two
different datasets in the same interface
IniBale	
  
Mandragore	
  
Find relevant results in a web search engine
by searching the URI
BnF	
  
Biblissima	
  
=	
  Titus	
  Livius	
  
New visualisation tools to enhance research
Introducing Mirador:
•  IIIF-compatible web viewer (Shared Canvas / OA)
•  Zoom, compare, annotate, share
•  multi-window workspace, cross-repository
(interoperability)
iiif.ioprojectmirador.org
Autograph handwriting and personal identity
Mirador and its potential uses:
•  Trace, identify and index an author’s personal annotations. Ex.:
Marginalia by Florus of Lyon on St Petersburg, National Library of Russia,
Lat.F.papyr. I.1, b (annotated in Mirador)
Autograph handwriting and personal identity
Mirador and its potential uses:
•  Create a database of autographs in order to better identify
scribes and writers
	
  
Note about an
autograph letter
by Jean Hervin in
the manuscript
Paris, BnF
Français 17708, f.
210r
Autograph handwriting and personal identity
BnF Français 17708, f. 210r, annotated in Mirador viewer:
http://demos.biblissima-condorcet.fr/mirador/?json=56241541e4b01190df3c263d
Stylistic features and personal identity
Mirador and its potential uses:
Compare stylistic features to better identify artists (e.g. Willem
Vrelant in Initiale)
	
  
Paris, Bibliothèque Sainte-Geneviève,
ms. 0811, f. 005
Reddition de Valenciennes à Herman,
comte de Mons
Attribution: Willem Vrelant (entourage)
Paris, Bibliothèque Sainte-Geneviève,
ms. 0809, f. 317
Siège de Mayence par les Romains
Attribution: Willem Vrelant (entourage)
Restoring the relationship between an artistic
work and its textual context
The interpretation of a miniature is dependent on the original
textual context.
However, there are many damaged manuscripts:
•  around 280 notes about cut miniatures in Initiale database
•  very few of these cut miniatures have been located
Example: Châteauroux BM, ms. 5, Grandes Chroniques de France
http://demos.biblissima-condorcet.fr/chateauroux/
What’s next?
•  Integrate all partner databases using a common XML
format to simplify the ingestion of data into the CubicWeb
application
•  Integrate the Mirador viewer within the web portal (with
new functionalities)
•  Enhance the search engine and navigation within the portal
•  Propose new visual representations of data

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Biblissima’s Choices of Tools and Methodology for Interoperability Purposes

  • 1. Biblissima’s Choices of Tools and Methodology for Interoperability Purposes Eduard FRUNZEANU Régis ROBINEAU Équipex Biblissima http://biblissima-condorcet.fr 5th HÉLOÏSE WORKSHOP Madrid, 19-21 October 2015
  • 2. New technologies for a new library
  • 3. Partners and challenges Around 40 databases with DATA and IMAGES codicology catalography manuscript transmission Esprit  des  livres   (ENC)   Codicologia   (IRHT)   Bibale   (IRHT)   BnF  Archives  et  Manuscrits   Pinakes   (IRHT)   Reliures   (BnF)  
  • 4. Partners and challenges Around 40 databases with DATA and IMAGES iconography prosopography Mandragore   (BnF)   IniBale   (IRHT)   textual corpora Bibliothèque  Virtuelles  Humanistes   (CESR)   Prosopographie  des  inventaires   (MRSH  Caen)   BUDE   (IRHT)   Sermones   (CIHAM)  
  • 5. Solutions and tools to handle and build interoperability of DATA & IMAGES ❖  Ontology (based on CIDOC-CRM and FRBRoo) ❖  Thesaurus/ Authority File (Ginco / BaseX) ❖  Viewer (Mirador) ❖  Semantic Web Application Framework (CubicWeb)
  • 6. Building the Thesaurus / Authority File •  Thesaurus: – Types of data: •  geographical names •  iconographical descriptors •  specialised terminology (codicology, palaeography) •  languages, etc. •  Standard / Tool: SKOS / Ginco •  Authority File: –  Types of data: •  persons and corporate bodies •  works –  Standard / Tool: XML-TEI / BaseX
  • 7. Geographical Thesaurus Types of geographical data: •  descriptors: geographical places identified in miniatures (historical, disappeared, fictional, non-identified, current) •  places of origin: city or abbey where an item (manuscript or printed work) was copied / edited / painted •  holding institutions: archives, libraries, museums Structure and format of geographical data: •  hierarchical thesaurus or flat lists for the descriptors •  places of origin associated with the relevant provinces, countries and geographical areas •  Country / City / Repository for the holding institutions
  • 8. Starting point for Biblissima’s GeoThesaurus 2 datasets: Mandragore (BnF) & Initiale (IRHT) Linked Data repositories & methods used for alignment: •  automatic alignment, checked & manually corrected, to geonames.org , data.bnf.fr (Map Department & Rameau), dbpedia.org •  manual alignment to specialised repositories: pleiades.stoa.org, trismegistos.org, bibelwissenschaft.de SKOS properties used to label the alignment and organise the thesaurus: prefLabel, altLabel, broader, narrower, exactMatch, closeMatch, relatedMatch
  • 9. Hierarchical thesaurus in Mandragore (BnF) Dewey Classification Administrative division (country & department) Physical geography
  • 10. Hierarchical thesaurus in Initiale (IRHT)
  • 11. Hierarchy of Biblissima’s GeoThesaurus I. General notions II. Political geography (based on feature codes of Geonames) A.  Geographical areas (= Dewey classification) 1.  Countries a)  Counties (1)  Cities 2.  Ancient cities and provinces III. Physical geography (based on feature codes of Geonames) A.  Continents B. Islands & Peninsulas C. Deserts & Oasis D. Rivers, Lakes, Seas E. Mountains & Volcanos F. Forests & Parks IV. Human constructions (based on feature codes of Geonames) A.  Monasteries B. Castles & palaces C. Religious sites D. Bridges E. Towers & fortresses V. Fictional places VI. Non-identified places VII. Disappeared places
  • 12. Integrating a geographical thesaurus into CubicWeb application used to build the Biblissima portal MNMT, OBS, RLG Geonames feature codes
  • 13. Record for a geographic place
  • 14. Get access to the data via a cartographic representation http://nossl.demo.logilab.fr/biblissima/descr-map
  • 15. Administrative interface of Ginco platform Hierarchy and structure of geographical terms
  • 16. Ginco-Diff: thesaurus page Thesaurus URI: http://data.biblissima.fr/thesaurus/page/ark:/43093/b6957cdd-bade-4373-b058-ca63680ee39b
  • 17. Ginco-Diff: concept page Concept URI: http://data.biblissima.fr/thesaurus/page/ark:/43093/359ed56c-3026-4323-8bef-73abd11d4b04
  • 18. Authority File Data about persons: -  Personal Name Heading -  Alternative Name Forms -  Gender -  Date of birth / death -  Place of birth / death -  Titles / Relators -  Works -  Alignments with linked data repositories: data.bnf.fr, viaf.org Relationships between persons (to be modelled in the near future): -  academic (master of / student of) -  genealogical (father of / husband of) -  institutional (friar of / member of) -  intellectual (translator of / copyist of / editor of / illuminator of) -  socio-cultural (dedicatee of / donor of / patron of / sponsor of)
  • 19. Authority record in XML-TEI edited in XXE framework
  • 20. HTML page created from XML-TEI file Identifier based on the XML ID Prosopographie des inventaires - Centre Michel de Boüard & MRSH de Caen
  • 21. Other projects using XML-TEI / BaseX solution
  • 22. Curate and enrich datasets Operations: •  identify identical items with different graphical forms •  align with other linked data repositories: –  data.bnf.fr - dbpedia.org –  viaf.org - geonames.org •  extract complementary information •  dispatch the complementary information to the original datasets Tools: •  OpenRefine •  GoogleXML •  PHP scripts
  • 23. OpenRefine: alignment with open source linked data repositories
  • 24. OpenRefine: clustering based on the similarity of character strings
  • 25. OpenRefine: clustering based on data.bnf.fr URIs
  • 27. SPARQL query to retrieve the personal name heading for an author via data.bnf.fr/sparql Alignment  of  the  database  graphical  form   Abbo  Floriacensis  =   hLp://data.bnf.fr/ark:/12148/cb12584637x    
  • 28. SPARQL query to retrieve alternative forms of an author’s name via data.bnf.fr/sparql Alignment  of  the  database  graphical  form   Abbo  Floriacensis  =   hLp://data.bnf.fr/ark:/12148/cb12584637x    
  • 29. SPARQL query to retrieve URIs from other linked data repositories Alignment  of  the  database  graphical  form   Abbo  Floriacensis  =   hLp://data.bnf.fr/ark:/12148/cb12584637x    
  • 30. SPARQL queries applied to an entire set of data
  • 31. Retrieve the personal name heading for an author
  • 32. Retrieve the variant forms for an author’s name
  • 33. Extract URIs from other linked data repositories
  • 34. Retrieve other type of information Biographical Note Scientific works used for the authority record
  • 35. GoogleXML: extract information about an author from HTML code
  • 36. GoogleXML: identify the appropriate tags
  • 37. Apply a GoogleXML formula to retrieve alternative name forms
  • 38. GoogleXML: extract geographical coordinates (decimal degrees) from HTML code
  • 39. GoogleXML: identify the appropriate tags
  • 40. Apply a GoogleXML formula
  • 41. PHP script •  Input (CSV): list of places aligned with data.bnf URIs Get lat/long (Sparql query in the loop):   SELECT  ?concept  ?spatialThing  ?long  ?lat  WHERE  {   ?concept  skos:closeMatch  <".$uri.">  .    ?concept  foaf:focus  ?spatialThing  .    ?spatialThing  geo:long  ?long  .    ?spatialThing  geo:lat  ?lat  .   }   •  Output (CSV): source data enriched with latitude/longitude coordinates
  • 42. Using technical solutions to build a prototype based on Initiale & Mandragore data demos.biblissima-­‐condorcet.fr/prototype/   One of the prototype’s main objectives: to build interoperability between two datasets from the iconographical databases Initiale (IRHT) and Mandragore (BnF)
  • 43. Aligning different forms of a name •  Titus Livius / Database Mandragore (BnF) http://mandragore.bnf.fr hLp://data.bnf.fr/ark:/12148/cb11886799m  
  • 44. Aligning different forms of a name •  Livius / Database Initiale (IRHT) http://initiale.irht.cnrs.fr hLp://data.bnf.fr/ark:/12148/cb11886799m  
  • 45. Find relevant results for data from two different datasets in the same interface IniBale   Mandragore  
  • 46. Find relevant results in a web search engine by searching the URI BnF   Biblissima   =  Titus  Livius  
  • 47. New visualisation tools to enhance research Introducing Mirador: •  IIIF-compatible web viewer (Shared Canvas / OA) •  Zoom, compare, annotate, share •  multi-window workspace, cross-repository (interoperability) iiif.ioprojectmirador.org
  • 48. Autograph handwriting and personal identity Mirador and its potential uses: •  Trace, identify and index an author’s personal annotations. Ex.: Marginalia by Florus of Lyon on St Petersburg, National Library of Russia, Lat.F.papyr. I.1, b (annotated in Mirador)
  • 49. Autograph handwriting and personal identity Mirador and its potential uses: •  Create a database of autographs in order to better identify scribes and writers   Note about an autograph letter by Jean Hervin in the manuscript Paris, BnF Français 17708, f. 210r
  • 50. Autograph handwriting and personal identity BnF Français 17708, f. 210r, annotated in Mirador viewer: http://demos.biblissima-condorcet.fr/mirador/?json=56241541e4b01190df3c263d
  • 51. Stylistic features and personal identity Mirador and its potential uses: Compare stylistic features to better identify artists (e.g. Willem Vrelant in Initiale)   Paris, Bibliothèque Sainte-Geneviève, ms. 0811, f. 005 Reddition de Valenciennes à Herman, comte de Mons Attribution: Willem Vrelant (entourage) Paris, Bibliothèque Sainte-Geneviève, ms. 0809, f. 317 Siège de Mayence par les Romains Attribution: Willem Vrelant (entourage)
  • 52.
  • 53. Restoring the relationship between an artistic work and its textual context The interpretation of a miniature is dependent on the original textual context. However, there are many damaged manuscripts: •  around 280 notes about cut miniatures in Initiale database •  very few of these cut miniatures have been located Example: Châteauroux BM, ms. 5, Grandes Chroniques de France http://demos.biblissima-condorcet.fr/chateauroux/
  • 54. What’s next? •  Integrate all partner databases using a common XML format to simplify the ingestion of data into the CubicWeb application •  Integrate the Mirador viewer within the web portal (with new functionalities) •  Enhance the search engine and navigation within the portal •  Propose new visual representations of data