Corr-and-Regress.ppt

krunal soni
krunal soniAssistant Professor at Parul University em Parul University
Correlation and
Regression
Davina Bristow &
Angela Quayle
Topics Covered:
 Is there a relationship between x and y?
 What is the strength of this relationship
 Pearson’s r
 Can we describe this relationship and use this to predict y from
x?
 Regression
 Is the relationship we have described statistically significant?
 t test
 Relevance to SPM
 GLM
The relationship between x and y
 Correlation: is there a relationship between 2
variables?
 Regression: how well a certain independent
variable predict dependent variable?
 CORRELATION  CAUSATION
In order to infer causality: manipulate independent
variable and observe effect on dependent variable
Scattergrams
Y
X
Y
X
Y
X
Y
Y Y
Positive correlation Negative correlation No correlation
Variance vs Covariance
 First, a note on your sample:
 If you’re wishing to assume that your sample is
representative of the general population (RANDOM
EFFECTS MODEL), use the degrees of freedom (n – 1)
in your calculations of variance or covariance.
 But if you’re simply wanting to assess your current
sample (FIXED EFFECTS MODEL), substitute n for
the degrees of freedom.
Variance vs Covariance
 Do two variables change together?
1
)
)(
(
)
,
cov( 1






n
y
y
x
x
y
x
i
n
i
i
Covariance:
• Gives information on the degree to
which two variables vary together.
• Note how similar the covariance is to
variance: the equation simply
multiplies x’s error scores by y’s error
scores as opposed to squaring x’s error
scores.
1
)
( 2
1
2





n
x
x
S
n
i
i
x
Variance:
• Gives information on variability of a
single variable.
Covariance
 When X and Y : cov (x,y) = pos.
 When X and Y : cov (x,y) = neg.
 When no constant relationship: cov (x,y) = 0
1
)
)(
(
)
,
cov( 1






n
y
y
x
x
y
x
i
n
i
i
Example Covariance
x y x
xi
 y
yi
 ( x
i
x  )( y
i
y  )
0 3 -3 0 0
2 2 -1 -1 1
3 4 0 1 0
4 0 1 -3 -3
6 6 3 3 9
3

x 3

y  7
75
.
1
4
7
1
))
)(
(
)
,
cov( 1








n
y
y
x
x
y
x
i
n
i
i What does this
number tell us?
0
1
2
3
4
5
6
7
0 1 2 3 4 5 6 7
Problem with Covariance:
 The value obtained by covariance is dependent on the size of
the data’s standard deviations: if large, the value will be
greater than if small… even if the relationship between x and y
is exactly the same in the large versus small standard
deviation datasets.
Example of how covariance value
relies on variance
High variance data Low variance data
Subject x y x error * y
error
x y X error * y
error
1 101 100 2500 54 53 9
2 81 80 900 53 52 4
3 61 60 100 52 51 1
4 51 50 0 51 50 0
5 41 40 100 50 49 1
6 21 20 900 49 48 4
7 1 0 2500 48 47 9
Mean 51 50 51 50
Sum of x error * y error : 7000 Sum of x error * y error : 28
Covariance: 1166.67 Covariance: 4.67
Solution: Pearson’s r
 Covariance does not really tell us anything
 Solution: standardise this measure
 Pearson’s R: standardises the covariance value.
 Divides the covariance by the multiplied standard deviations of
X and Y:
y
x
xy
s
s
y
x
r
)
,
cov(

Pearson’s R continued
1
)
)(
(
)
,
cov( 1






n
y
y
x
x
y
x
i
n
i
i
y
x
i
n
i
i
xy
s
s
n
y
y
x
x
r
)
1
(
)
)(
(
1






1
*
1




n
Z
Z
r
n
i
y
x
xy
i
i
Limitations of r
 When r = 1 or r = -1:
 We can predict y from x with certainty
 all data points are on a straight line: y = ax + b
 r is actually
 r = true r of whole population
 = estimate of r based on data
 r is very sensitive to extreme values:
0
1
2
3
4
5
0 1 2 3 4 5 6
r̂
r̂
Regression
 Correlation tells you if there is an association
between x and y but it doesn’t describe the
relationship or allow you to predict one
variable from the other.
 To do this we need REGRESSION!
Best-fit Line
= ŷ, predicted value
 Aim of linear regression is to fit a straight line, ŷ = ax + b, to data that
gives best prediction of y for any value of x
 This will be the line that
minimises distance between
data and fitted line, i.e.
the residuals
intercept
ε
ŷ = ax + b
ε = residual error
= y i , true value
slope
Least Squares Regression
 To find the best line we must minimise the sum of
the squares of the residuals (the vertical distances
from the data points to our line)
Residual (ε) = y - ŷ
Sum of squares of residuals = Σ (y – ŷ)2
Model line: ŷ = ax + b
 we must find values of a and b that minimise
Σ (y – ŷ)2
a = slope, b = intercept
Finding b
 First we find the value of b that gives the min
sum of squares
ε ε
b
b
b
 Trying different values of b is equivalent to
shifting the line up and down the scatter plot
Finding a
 Now we find the value of a that gives the min
sum of squares
b b b
 Trying out different values of a is equivalent to
changing the slope of the line, while b stays
constant
Minimising sums of squares
 Need to minimise Σ(y–ŷ)2
 ŷ = ax + b
 so need to minimise:
Σ(y - ax - b)2
 If we plot the sums of squares
for all different values of a and b
we get a parabola, because it is a
squared term
 So the min sum of squares is at
the bottom of the curve, where
the gradient is zero.
Values of a and b
sums
of
squares
(S)
Gradient = 0
min S
The maths bit
 The min sum of squares is at the bottom of the curve
where the gradient = 0
 So we can find a and b that give min sum of squares
by taking partial derivatives of Σ(y - ax - b)2 with
respect to a and b separately
 Then we solve these for 0 to give us the values of a
and b that give the min sum of squares
The solution
 Doing this gives the following equations for a and b:
a =
r sy
sx
r = correlation coefficient of x and y
sy = standard deviation of y
sx = standard deviation of x
 From you can see that:
 A low correlation coefficient gives a flatter slope (small value of
a)
 Large spread of y, i.e. high standard deviation, results in a
steeper slope (high value of a)
 Large spread of x, i.e. high standard deviation, results in a flatter
slope (high value of a)
The solution cont.
 Our model equation is ŷ = ax + b
 This line must pass through the mean so:
y = ax + b b = y – ax
 We can put our equation for a into this giving:
b = y – ax
b = y -
r sy
sx
r = correlation coefficient of x and y
sy = standard deviation of y
sx = standard deviation of x
x
 The smaller the correlation, the closer the
intercept is to the mean of y
Back to the model
 If the correlation is zero, we will simply predict the mean of y for every
value of x, and our regression line is just a flat straight line crossing the
x-axis at y
 But this isn’t very useful.
 We can calculate the regression line for any data, but the important
question is how well does this line fit the data, or how good is it at
predicting y from x
ŷ = ax + b =
r sy
sx
r sy
sx
x + y - x
r sy
sx
ŷ = (x – x) + y
Rearranges to:
a b
a a
How good is our model?
 Total variance of y: sy
2 =
∑(y – y)2
n - 1
SSy
dfy
=
 Variance of predicted y values (ŷ):
 Error variance:
sŷ
2 =
∑(ŷ – y)2
n - 1
SSpred
dfŷ
=
This is the variance
explained by our
regression model
serror
2 =
∑(y – ŷ)2
n - 2
SSer
dfer
=
This is the variance of the error
between our predicted y values and
the actual y values, and thus is the
variance in y that is NOT explained
by the regression model
 Total variance = predicted variance + error variance
sy
2 = sŷ
2 + ser
2
 Conveniently, via some complicated rearranging
sŷ
2 = r2 sy
2
r2 = sŷ
2 / sy
2
 so r2 is the proportion of the variance in y that is explained by
our regression model
How good is our model cont.
How good is our model cont.
 Insert r2 sy
2 into sy
2 = sŷ
2 + ser
2 and rearrange to get:
ser
2 = sy
2 – r2sy
2
= sy
2 (1 – r2)
 From this we can see that the greater the correlation
the smaller the error variance, so the better our
prediction
Is the model significant?
 i.e. do we get a significantly better prediction of y
from our regression equation than by just predicting
the mean?
 F-statistic:
F(dfŷ,dfer) =
sŷ
2
ser
2
=......=
r2 (n - 2)2
1 – r2
complicated
rearranging
 And it follows that:
t(n-2) =
r (n - 2)
√1 – r2
(because F = t2)
So all we need to
know are r and n
General Linear Model
 Linear regression is actually a form of the
General Linear Model where the parameters
are a, the slope of the line, and b, the intercept.
y = ax + b +ε
 A General Linear Model is just any model that
describes the data in terms of a straight line
Multiple regression
 Multiple regression is used to determine the effect of a number
of independent variables, x1, x2, x3 etc, on a single dependent
variable, y
 The different x variables are combined in a linear way and
each has its own regression coefficient:
y = a1x1+ a2x2 +…..+ anxn + b + ε
 The a parameters reflect the independent contribution of each
independent variable, x, to the value of the dependent variable,
y.
 i.e. the amount of variance in y that is accounted for by each x
variable after all the other x variables have been accounted for
SPM
 Linear regression is a GLM that models the effect of one
independent variable, x, on ONE dependent variable, y
 Multiple Regression models the effect of several independent
variables, x1, x2 etc, on ONE dependent variable, y
 Both are types of General Linear Model
 GLM can also allow you to analyse the effects of several
independent x variables on several dependent variables, y1, y2,
y3 etc, in a linear combination
 This is what SPM does and all will be explained next week!
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Corr-and-Regress.ppt

  • 2. Topics Covered:  Is there a relationship between x and y?  What is the strength of this relationship  Pearson’s r  Can we describe this relationship and use this to predict y from x?  Regression  Is the relationship we have described statistically significant?  t test  Relevance to SPM  GLM
  • 3. The relationship between x and y  Correlation: is there a relationship between 2 variables?  Regression: how well a certain independent variable predict dependent variable?  CORRELATION  CAUSATION In order to infer causality: manipulate independent variable and observe effect on dependent variable
  • 4. Scattergrams Y X Y X Y X Y Y Y Positive correlation Negative correlation No correlation
  • 5. Variance vs Covariance  First, a note on your sample:  If you’re wishing to assume that your sample is representative of the general population (RANDOM EFFECTS MODEL), use the degrees of freedom (n – 1) in your calculations of variance or covariance.  But if you’re simply wanting to assess your current sample (FIXED EFFECTS MODEL), substitute n for the degrees of freedom.
  • 6. Variance vs Covariance  Do two variables change together? 1 ) )( ( ) , cov( 1       n y y x x y x i n i i Covariance: • Gives information on the degree to which two variables vary together. • Note how similar the covariance is to variance: the equation simply multiplies x’s error scores by y’s error scores as opposed to squaring x’s error scores. 1 ) ( 2 1 2      n x x S n i i x Variance: • Gives information on variability of a single variable.
  • 7. Covariance  When X and Y : cov (x,y) = pos.  When X and Y : cov (x,y) = neg.  When no constant relationship: cov (x,y) = 0 1 ) )( ( ) , cov( 1       n y y x x y x i n i i
  • 8. Example Covariance x y x xi  y yi  ( x i x  )( y i y  ) 0 3 -3 0 0 2 2 -1 -1 1 3 4 0 1 0 4 0 1 -3 -3 6 6 3 3 9 3  x 3  y  7 75 . 1 4 7 1 )) )( ( ) , cov( 1         n y y x x y x i n i i What does this number tell us? 0 1 2 3 4 5 6 7 0 1 2 3 4 5 6 7
  • 9. Problem with Covariance:  The value obtained by covariance is dependent on the size of the data’s standard deviations: if large, the value will be greater than if small… even if the relationship between x and y is exactly the same in the large versus small standard deviation datasets.
  • 10. Example of how covariance value relies on variance High variance data Low variance data Subject x y x error * y error x y X error * y error 1 101 100 2500 54 53 9 2 81 80 900 53 52 4 3 61 60 100 52 51 1 4 51 50 0 51 50 0 5 41 40 100 50 49 1 6 21 20 900 49 48 4 7 1 0 2500 48 47 9 Mean 51 50 51 50 Sum of x error * y error : 7000 Sum of x error * y error : 28 Covariance: 1166.67 Covariance: 4.67
  • 11. Solution: Pearson’s r  Covariance does not really tell us anything  Solution: standardise this measure  Pearson’s R: standardises the covariance value.  Divides the covariance by the multiplied standard deviations of X and Y: y x xy s s y x r ) , cov( 
  • 12. Pearson’s R continued 1 ) )( ( ) , cov( 1       n y y x x y x i n i i y x i n i i xy s s n y y x x r ) 1 ( ) )( ( 1       1 * 1     n Z Z r n i y x xy i i
  • 13. Limitations of r  When r = 1 or r = -1:  We can predict y from x with certainty  all data points are on a straight line: y = ax + b  r is actually  r = true r of whole population  = estimate of r based on data  r is very sensitive to extreme values: 0 1 2 3 4 5 0 1 2 3 4 5 6 r̂ r̂
  • 14. Regression  Correlation tells you if there is an association between x and y but it doesn’t describe the relationship or allow you to predict one variable from the other.  To do this we need REGRESSION!
  • 15. Best-fit Line = ŷ, predicted value  Aim of linear regression is to fit a straight line, ŷ = ax + b, to data that gives best prediction of y for any value of x  This will be the line that minimises distance between data and fitted line, i.e. the residuals intercept ε ŷ = ax + b ε = residual error = y i , true value slope
  • 16. Least Squares Regression  To find the best line we must minimise the sum of the squares of the residuals (the vertical distances from the data points to our line) Residual (ε) = y - ŷ Sum of squares of residuals = Σ (y – ŷ)2 Model line: ŷ = ax + b  we must find values of a and b that minimise Σ (y – ŷ)2 a = slope, b = intercept
  • 17. Finding b  First we find the value of b that gives the min sum of squares ε ε b b b  Trying different values of b is equivalent to shifting the line up and down the scatter plot
  • 18. Finding a  Now we find the value of a that gives the min sum of squares b b b  Trying out different values of a is equivalent to changing the slope of the line, while b stays constant
  • 19. Minimising sums of squares  Need to minimise Σ(y–ŷ)2  ŷ = ax + b  so need to minimise: Σ(y - ax - b)2  If we plot the sums of squares for all different values of a and b we get a parabola, because it is a squared term  So the min sum of squares is at the bottom of the curve, where the gradient is zero. Values of a and b sums of squares (S) Gradient = 0 min S
  • 20. The maths bit  The min sum of squares is at the bottom of the curve where the gradient = 0  So we can find a and b that give min sum of squares by taking partial derivatives of Σ(y - ax - b)2 with respect to a and b separately  Then we solve these for 0 to give us the values of a and b that give the min sum of squares
  • 21. The solution  Doing this gives the following equations for a and b: a = r sy sx r = correlation coefficient of x and y sy = standard deviation of y sx = standard deviation of x  From you can see that:  A low correlation coefficient gives a flatter slope (small value of a)  Large spread of y, i.e. high standard deviation, results in a steeper slope (high value of a)  Large spread of x, i.e. high standard deviation, results in a flatter slope (high value of a)
  • 22. The solution cont.  Our model equation is ŷ = ax + b  This line must pass through the mean so: y = ax + b b = y – ax  We can put our equation for a into this giving: b = y – ax b = y - r sy sx r = correlation coefficient of x and y sy = standard deviation of y sx = standard deviation of x x  The smaller the correlation, the closer the intercept is to the mean of y
  • 23. Back to the model  If the correlation is zero, we will simply predict the mean of y for every value of x, and our regression line is just a flat straight line crossing the x-axis at y  But this isn’t very useful.  We can calculate the regression line for any data, but the important question is how well does this line fit the data, or how good is it at predicting y from x ŷ = ax + b = r sy sx r sy sx x + y - x r sy sx ŷ = (x – x) + y Rearranges to: a b a a
  • 24. How good is our model?  Total variance of y: sy 2 = ∑(y – y)2 n - 1 SSy dfy =  Variance of predicted y values (ŷ):  Error variance: sŷ 2 = ∑(ŷ – y)2 n - 1 SSpred dfŷ = This is the variance explained by our regression model serror 2 = ∑(y – ŷ)2 n - 2 SSer dfer = This is the variance of the error between our predicted y values and the actual y values, and thus is the variance in y that is NOT explained by the regression model
  • 25.  Total variance = predicted variance + error variance sy 2 = sŷ 2 + ser 2  Conveniently, via some complicated rearranging sŷ 2 = r2 sy 2 r2 = sŷ 2 / sy 2  so r2 is the proportion of the variance in y that is explained by our regression model How good is our model cont.
  • 26. How good is our model cont.  Insert r2 sy 2 into sy 2 = sŷ 2 + ser 2 and rearrange to get: ser 2 = sy 2 – r2sy 2 = sy 2 (1 – r2)  From this we can see that the greater the correlation the smaller the error variance, so the better our prediction
  • 27. Is the model significant?  i.e. do we get a significantly better prediction of y from our regression equation than by just predicting the mean?  F-statistic: F(dfŷ,dfer) = sŷ 2 ser 2 =......= r2 (n - 2)2 1 – r2 complicated rearranging  And it follows that: t(n-2) = r (n - 2) √1 – r2 (because F = t2) So all we need to know are r and n
  • 28. General Linear Model  Linear regression is actually a form of the General Linear Model where the parameters are a, the slope of the line, and b, the intercept. y = ax + b +ε  A General Linear Model is just any model that describes the data in terms of a straight line
  • 29. Multiple regression  Multiple regression is used to determine the effect of a number of independent variables, x1, x2, x3 etc, on a single dependent variable, y  The different x variables are combined in a linear way and each has its own regression coefficient: y = a1x1+ a2x2 +…..+ anxn + b + ε  The a parameters reflect the independent contribution of each independent variable, x, to the value of the dependent variable, y.  i.e. the amount of variance in y that is accounted for by each x variable after all the other x variables have been accounted for
  • 30. SPM  Linear regression is a GLM that models the effect of one independent variable, x, on ONE dependent variable, y  Multiple Regression models the effect of several independent variables, x1, x2 etc, on ONE dependent variable, y  Both are types of General Linear Model  GLM can also allow you to analyse the effects of several independent x variables on several dependent variables, y1, y2, y3 etc, in a linear combination  This is what SPM does and all will be explained next week!