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Microbiology
Practical 1
Ilana Kovach
Live, laugh, love and learn
“There is no threshold limit to the capacity of the
human mind – the girl who made this crazy
powerpoint”
Gram Positive Cocci
Staphylococcus aureus(BSL-2)
Staphylococcus xylosus (BSL-1)
Staphylococcus epidermidis(BSL-1)
Streptococcus pyogenes(BSL-2)
Streptococcus mutans (BSL-1)
Streptococcus zooepidemicus (BSL-2)
Enterococcus faecalis (BSL-2)
Micrococcus luteus (BSL-1)
Gram Positive Rods
Bacillus cereus (BSL-2)
Bacillus subtilis (BSL-1)
Bacillus megaterium (BSL-1)
Bacillus stearothermophilus (BSL-1)
Clostridium sporogenes (BSL-1)
Diptheroids
Mycobacterium smegmatis (BSL-1)
Gram Negative Rods
Alcaligenes faecalis (BSL-1)
Enterobacter aerogenes (BSL-1)
Escherichia coli(BSL-1)
Morganella morganii(BSL-2)
Pseudomonas aeruginosa(BSL-2)
Pseudomonas fluorescens(BSL-1)
Serratia Marcescens(BSL-1)
Gram Positive Cocci
Neisseria species (G- negative cocci)
Saccharomyces cerevisiae(BSL-1)
Week 1
Microscopy
Gram Stain
Aseptic Technique “Pathogen free environment”
Beginning of Lab
1.) Put away Belongings
2.) Clean Tables
3.) wash Hands
4.) Tie back long Hair
BSL-1 (Low risk) Doesn’t cause disease in healthy humans
*Lab Coats
BSL-2 (moderate risk) associated in moderate disease in
humans
*Lab coats & Disposable Gloves
 Googles required when using chemicals (Example Gram
staining)
Opportunistic doesn’t typically cause disease in healthy
adults, but may in immunocompromised adults or children
4 potential routes of Exposure:
1. Absorption Through skin or mucous membranes
2. Inhalation
3. Ingestion
4. Inoculation
Bacterial Specimen info:
Name of Microorganism
Your name/Initials
Date
Tape labels are required for media in Test Tubes (White)
Carry Test tubes  Incubator
Test Tube rack (M/W class Yellow)
Tape petri dishes on both ends before carrying them to
incubator
Disposal of contaminated items:
Petri plates  Biohazard waste
Glass pipettes  Pipette discard box
Test tubes  Test tube discard bin
Glass slides SHARPS box
Gloves  Biohazard waste
Plastic ware  Biohazard waste
Broken test tubes  SHARPS box
Regular Trash uncontaminated items & Paper towels
End of Lab disinfect tables & wash your hands
Ex. 1 Microscopy
Bacillus
Staphylococcus
Saccharomyces
Arrangement of Prokaryotic Cells
Cocci  multiple Planes Bacilli  single Planes
Coccus Diplococci Staphylococci
Streptococci Sarcina
Tetrad
Coccobacillus Bacilli
Diplobacilli Palisades
Streptobacilli
3 main Prokaryotic Cell shapes
Cocci
Spirals
1. Spirochetes  Flexible
2. Spirillum  Inflexible
Rods “Bacillis”
Coccobacillus “Short Rod”
Vibrio “Curved Spiral”
Pleomorphic
“Does not Have a shape”
Oculars
Arm
Objective
Lenses
Nose Piece
Body
Base
Fine
Focus
Coarse
focus
Stage
Light Source
(Illuminator)
Condenser & Iris
Diaphragm
(underneath
Microscope Skills
Oil Immersion: Apply between 40x and 100x
Specimen in
Field of View & in Focus: Trick Bring the Edge of the slide into
focus should appear as 3-D
Light Level: light source (Illuminator)switchturns light source at base;
Condenser collects& concentrates light from the illuminator& directs
it to the irisdiaphragm
Clean Up: oil Immersioncleaned from all lenses & Stage
Slide removed, Placed in 4x, Stage Lowered & Centered.
Identify: Gram positive/Negative,Morphology, Total Magnification
Ex. 2 Gram Stain
Escherichia Coli “Rod”
 Gram Negative (Pink)
Bacillus subtilis “Rod”
 Gram Positive (Purple)
Staphylococcus Xyolus “Spherical”
 Gram Positive (Purple)
Gram Positive Gram Negative
Teichoic Acid
Lipoteichoic Acid
Peptidoglycan Layer
(cell wall)
Cytoplasmic
Membrane
Integral Protein
Peptidoglycan Layer of
(cell wall)
Cytoplasmic
Membrane
Outer
Membrane of
Cell
Porin Periplasmic
Space
Lipopolysaccharide Layer
(LPS) Containing Lipid A
Heat fix
 Kills the microbes
 Makes microbes more
permeable to stains
 Fixes microbes to slide
Why dry before Heat fixing?
If heated right after the water would cause the smear to
overheat & denature some features in the stain.
Bacterial Smear
A smear is a small volume (Loopful) of specimen- containing
medium that is spread (smeared) onto microscope slide
Week 2
Capsule Stain
Acid Fast Stain
Endospore Stain
Ex. 3 Capsule Stain
 Klebsiella Pneumoniae
 Capsule is Halo around the
cell
Heat & water
would dislodge Capsule from
bacteria (polysaccharide,
Polypeptide, Glycoprotein) Need t
Air Dry
Ex. 4 Acid-Fast Stain
 Myobacterium smegmatis (Acid Fast
Cells)
 Bacillus Subtilis (Non Acid fast cells)
Ex. 5 Endospore Stain(Bacillus & clostridium)
 Bacillus Subtilis as Vegatative Cells
 Bacillus Subtilis Vegetative cells with Endospore inside
 Bacillus Subtilis as a Free Spore
Endospores
(Bacillus & Clostridium)
Outer Spore Coat (Exosporium)
Outer Spore Coat
(Exosporium)
Spore Coat
Outer
Membrane
Cortex
Spore Core
Inner
Membrane
Week 3
Culture Transfer Technique
Isolation of Pure Cultures
Viable Plate Count
Culture Characteristics
Ex. 6 Culture Transfer Technique
 Broth  Deep (Needle Single
Slob)
 Broth  Slant (Loop Zig Zag)
 Slant  Broth (Loop Swish)
All Caps loose but secure
Incubate 25º
SlantSlant Broth BrothBrothDeep
Results
Ex. 7 Pure Isolation Cultures
Ilana Kovach (09/02/15) Serratia
Marcescens & Escherichia Coli
21
34
 Incubate upside down to prevent
condensation at 25º
 Tape both ends
Warning: Sterilize
after each streak
& DO NOT reapply
more bacteria!!!
Results
The purpose of this
method is to isolate pure
colonies of Bacteria
Ex. 8 Viable Plate count
10-1 10-2 10-3 10-4 10-5 10-6 10-7
10-810-710-6
Results
10-8
10-7
More than 300 =TNTC
Less than 30 = TFTC
Ex. 9 Growth Characteristics of Colonies & Broth Cultures
Micrococcus
Luteus
Size: 1.5mm
Pigmentation: Cream
Form: Circular
Elevation: Flat
Margin: entire
Size: 5mm
Pigmentation: Yellow
Form: Circular
Elevation: Umbonate
Margin: Entire
Size: 2mm
Pigmentation: Green
Form: Irregular
Elevation: Pulvinate
Margin: Erose
Ex. 9 Growth Characteristics of Colonies & Broth Cultures
Escherichia
Coli
Bacillus
Cereus
Size: 4mm
Pigmentation: Cream
Form: Irregular
Elevation: Convex
Margin: Undulate
Size: 3mm
Pigmentation: Cream
Form: Filamentous
Elevation: Flat
Margin: Erose
Form
Elevation
Margin
Name of
Specimen in
Broth
Growth Pattern Descriptions
Bacillus Cereus Little Sediment; Mostly Fine
Mycobacterium
Smegmatis
Sediment
Pseudomonas
Aeruginosa
Sediment
Saccromyces
Cerevisiae
Little Sediment; Mostly fine
Serratia
Marscens
Fine
Sediment:
Myobacterium Smegmatis
Pseudomonas Aeruginosa
Mostly Fine/little
Sediment:
Bacillus Cereus
Saccharomyces Cerevisiae
Fine Pellicle Sediment
Flocculent
“Flaky”
Identify the type of Media
in each tube?
1) Broth
2) Slant
3) Deep
Based on the results of this four way isolation
streak, what do you think this student may
have done incorrectly during his or her four
way streak procedure?
They either did not sterilize the loop between
each quadrant or they reapplied the bacteria
after each Quadrant streak
Observe this Circled colony on this agar
plate. Using this provided diagram as a
guide. Determine the following
characteristics?
Size: 5mm
Margin: Entire
Pigmentation: Cream Color
Elevation: Convex
Form: Circular
Observe this Circled colony
on this agar What type of
Growth pattern is shown in
this test Tube
Fine with a little bit of
sediment at the bottom
Week 4
Effects of Temperature on Microbial Growth
Oxygen Requirements
Growth of Anaerobic Organisms
Ex. 10
Effects of
Temperature on
Microbial Growth
4 nutrient Agar Plates
Split into 5
Incubators:
4◦C, 25◦C, 37◦C & 45◦C
Results
Serratia
Marcescens
Micrococcus
Luteus
Pseudomonas
Fluorescens
Micrococcus
Luteus
Serratia
Marcescens
Escherichia
Coli
Escherichia
Coli
Bacillus
Stearothermophilus
25◦C 37◦C
55◦C
Pseudomonas
Fluorescens
4◦C
Psychrophiles
Cold ~ (-5- 20º); optimal: 10º
Mesophiles
Moderate ~ (20º-45º); optimal: 37º
Thermophiles
Hot ~ (Low 45’s – 80’s)
Hyperthermophiles
HOT!! (80’s & some up to 105º))
Escherichia Coli
Micrococcus Luteus
Serratia Marcescens
Saccharomyces Cerevisiae
Bacillus Stearothermophilus
Ex. 11
Oxygen
Requirements
Obtain Melted BHI from
water Bath
While BHI tube is still liquefied add 2 drops of the
appropriate inoculum in (brain Heart infusion)
BHI tube using a sterile Pasteur Pipette; Cap
should be loose (but secure)
Roll BHI tube between palms of your hands to disperse the
bacteria throughout the tube, taking care not to create
bubbles or aerate the agar
Place BHI tube in ice bath until solidify 37ºC incubator
Results
Bacillus
Subtilis
Obligate Aerobe
Crinkle at top
(Bacteria
Wants O2)
Saccharomyces
Cerevisiae
Microaerophile
Toward
the Top
Concaved
Specks
toward the
Bottom
Clostridium
Sporogenes
Obligate Anaerobe
Serratia
Marcescens
Film at top
Specks
Throughout
the medium
Staphylococcus
Xylosus
Enterococcus
Faecalis
Aerotolerant
Micrococcus
Luteus
Obligate
Aerobe
Mycobacterium
Smegmatis
Obligate Aerobe
Toward the Top NO
speck Within the Media
Film at top
Specks
throughout
the medium
When held to light
Speck throughout
Medium No film on
top (Evenly
Distributed)
High O2
Low O2
Obligate
Aerobe
Obligate
Anaerobe
Microaerophil
Aerotolerant
Obligate (Strict)
Aerobes
Requires O2
 Undergo Aerobic Respiration
 Oxygen finalElectron Acceptor
Microaerophil Require lower O2 levels (2-10%)
 Undergo Aerobic Respiration
 Limited abilityto detoxifyhydrogen peroxide and superoxideRadicals
Facultative
(Facultative
Anaerobes)
Can Live either Presence OR absence of O2 (Prefer Oxygen)
 Aerobic Respiration
 Anaerobic Respiration
 Fermentation
Aerotolerant Can live in either Presence or Absence of Oxygen (Doesn’t Prefer Oxygen)
 Never use Aerobic metabolism
 Have enzymes that neutralizetoxicoxygen
Obligate (Strict)
Anaerobes
O2 is Deadly
 Use anaerobic Metabolism
 Lack Enzymes to neutralizetoxicoxygen
Oxygen Requirements
Ex. 12
Growth of Anaerobic
Organisms
Gaspak Jar
The Hydrogen gas combines with free oxygen in the chamber to produce
water. The Reaction is Catalyzed by palladium which is attach to the
underside lid of the Jar . The carbon dioxide replaces the removed
oxygen creating a completely anaerobic environment
2H2 + O2  2H2O
Pseudomonas Aeruginosa
Bacillus Subtilis
Escherichia Coli
Clostridium Sporogenes
Envelope:
Sodium Borohydride  H2 (Hydrogen Gas)
Sodium Bicarbonate  CO2 (Carbon Dioxide)
Results
Candle Jar
Growth Should Occur Under Anaerobic Conditions:
Facultative Escherichia Coli
Obligate Anaerobe Clostridium Sporogenes
Clostridium Sporogenes “Obligate Anaerobe”
Escherichia Coli “Facultative”
Results
37ºC incubator
Notice Growth Did NOT occur for Obligate
Anaerobe Clostridium Sporogenes
Escherichia Coli Can’t Grow
Ex. 12
Growth of Anaerobic
Organisms
4 Thioglycollate Broth Tubes
Pseudomonas Aeruginosa
Bacillus Subtilis
Escherichia Coli
Clostridium Sporogenes
Pink = Oxygen
Yellow = No Oxygen
Resazurin The oxygen concentration at a given level is
indicated by a redox sensitive dye that turns pink in the presence of
oxygen
Sodium Thioglycollate Consumes Oxygen
Results
Pseudomonas
Aeruginosa
Obligate
Aerobe
Bacillus
Subtilis
Obligate
Aerobe
(Gravity Pulls Down
Dead Bacteria)
Escherichia
Coli
Clostridium
Sporogenes
Obligate
Anaerobe
Toward
the Top
Bacteria
on Top
Dead
Bacteria
Throughout
(But Prefer O2)
Toward the
Bottom
Identify the Oxygen Class & any Example
Genus +Species
1) Aerotolerant Enterococcus Faecalis
2) Obligate Aerobe Bacillus Subtilis
3) Microaerophil Saccharomyces Cerevisiae
4) Facultative Escherichia Coli
5) Obligate Anaerobe Clostridium Sporogenes
Indicate Temperature Class Name the Chemical that is the
reducing agent in the Media?
Sodium Thioglycollate
Name the chemical in this media
that changes color depending on
whether or not oxygen is present
Resazurin
Oxygen Class Tube A Facultative
Oxygen Class Tube B Aerotolerant
Observe this Circled colony Name 2
chemicals in Gas Pak Envelope
1) Sodium Bicarbonate
2) Sodium Borohydride
2 chemicals Produced when chemicals in
Envelope are Activated
CO2 & O2
Write Equation that occurs in GASPAK
Jar that removes O2 and makes chamber
Anaerobic
2H2 + O2 2H2O (Pallidium Catalyst)
4◦C 25◦C 37◦C 55◦C Temperature Class
A - + - - Mesophile
B + + - - Psychrotroph
C - - - + Thermophile
D - + + - Mesophile
E + - - - Psychrophile
Week 5
Selective & Differential media
Chemical control of Microorganisms
Chemotherapeutic agents
Additive & synergistic effects on Antibiotics
Ex. 13: Use of
Selective, Differential &
Enriched Media
Mannitol Salt Agar
Selective: 7.5% NaCl
Halotolerants
Differential: Carbohydrate Substrate Mannitol &
“phenol Red” (Ability to ferment mannitol)
Red Yellow
fermentation
No fermentation
Staphylococcus xylosus
Enterococcus faecalis
Staphylococcus epidermidis
Blood Agar
Differential ONLY: Hemolysis  some bacteria produce exotoxins that cause lysis of RBC
Beta (Burst): Complete Clearing of Blood around colonies
Alpha (almost): Partial lysis Greenish-Yellow Discoloration
Gamma: No lysis
Streptococcus mutans
GammaAlphaBeta
Enterococcus faecalis
Staphylococcus Xylosus
Streptococcus Zooepidmicus
Columbia
C-NA agar
Selective: Colistin + Nalidixic Acid
Gram Positive
Differential: Blood agar
Beta, Alpha, Gamma
Alpha
Enterococcus Faecalis
Staphylococcus xylosus
Beta
MacConkey
Agar
 Selective: Crystal Violet & Bile Salts
Gram Negative
 Differential: Substrate Lactose & pH
indicator “Neutral Red”
RED  Pink
Escherichia Coli
Enterobacter aerogenes
Morganella Morganii
Eosin Methylene Blue Agar
 Selective: Eosin + Methylene Blue
Gram Negative
 Differential: Substrate Lactose
Pink Small amount of acid
Greenish Large amount of acid
Escherichia Coli
Enterobacter aerogenes
Morganella Morganii
Ex. 14:
Chemical Control of
Microorganisms
Measuring Zone of Inhibition
Bleach
Lab Cleanerisopropanol
Vinegar
Ex. 15:
Chemotherapeutic
Agents
E test
Antibiotic: Trimethoprim & sulfa TS
MIC  .047
Susceptible
S < R >
Ampicillin (AM) 8 8
Daptomycin (DPC) 1 1
Imipenem (IP) 2 8
Tetracycline (TC) 1 2
Trigecycline (TGC) 1 2
Trimethoprim & Sulfa
(TS)
2 4
antibiotic Inhibition zone
diameter
Susceptible/
intermediate/
resistant
Nalidixic acid
(NA30)
11mm Resistant
Trimethoprim/Sulfam
ethoxazole (SXT25)
36mm Susceptible
Gentamycin (CN10) 26mm Susceptible
Vancomycin (VA30) 17mm Susceptible
Penicillin (P10) 54mm Susceptible
Cefoxitin (FOX30) 25mm Susceptible
Tetracycline (TE30) 36mm Susceptible
Azithromycin
(AZM15)
25mm Susceptible
Disk diffusion assay
Disc Code Resistant
(<mm)
Intermediate
(mm range)
Susceptible
(>mm)
AZM15 13 14-17 18
CN10 12 13-14 15
VA30
Enterococcus
14 15-16 17
VA30
Other
9 10-11 12
P10
Staphylococcus
28 - 29
P10
Enterococcus
14 - 15
P10
Streptococcus
19 20-27 28
P10
Other
19 - 20
TE30 14 15-18 19
FOX30 14 15-17 18
SXT25 10 11-15 16
NA30 13 14-18 19
Ex. 16: Additive & Synergistic Effects on Antibiotics
Synergistic
Additive
“Overall no
greater than the
sum of individual
antibiotic.
Uniform”
“Overall effect of
antibiotic combination is
greater than sum of
individual antibiotic.
Merge in the middle”
Station 3: MSA plates
1) What does the MSA select for? Halotolerants
2) What are the selective ingredients of MSA? 7.5% sodium chloride
3) What is the carbohydrate in MSA? Mannitol
4) Does the bacteria growing in sector A ferment mannitol? YES
5) Does the bacteria growing on sector B ferment mannitol? NO
6) Give example of a bacterium that ferments mannitol and one that does not ferment mannitol
a. Enterococcus Faecalis
b. Staphylococcus Epidermis
Station 1: EMB and MacConkey Plate
1) What does EMB and MacConkey Plates Select for? Gram –
2) What carbohydrates is in both EMB and MacConkey agar? Lactose
3) What are the selective ingredients in EMB agar? Eosin & Methylene Blue
4) What are the selective ingredients in MacConkey agar?
Crystal Violet & Bile salts
1) What is the pH indicator in MacConkey agar? Neutral Red
2) Does the bacteria growing on sector A ferment Lactose?
EMB (No) & MacConkey (No)
1) Does the bacteria growing on sector B ferment Lactose?
EMB (Yes) & MacConkey Yes
1) Give an example of a bacteria that ferments lactose
and one that does not ferment lactose
a. Escherichia Coli
b. Morganella Morganii
Station 3: Mueller-Hinton Plates
1) Measure the zone of Inhibition SXT25 on the disk fusion plate? 23mm
2) Based on your measurement, is the bacteria on this plate susceptible,
resistant or intermediate to this antibiotic. Susceptible
3) Measure the MIC at .032 on the E-test plate. .032
Station 4: CCNA plate
1) What does CCNA select for? Gram -
2) Name the two antibiotics that make CCNA agar selective Colistin & Nalidixic Acid
3) Identify the hemolysis pattern of the bacteria growing on sector A “alpha”
4) Identify the hemolysis pattern of the bacteria growing on sector B “Beta”
5) Give an example of (a) bacterium that is alpha hemolytic (b) Beta Hemolytic (c)
Gamma hemolytic
a. Enterococcus Faecalis (alpha)
b. Staphylococcus xylosus (Beta)
c. Streptococcus Mutans
Week 6
Normal microbiota of the mouth
Normal microbiota of the throat & Skin
Cultivation of Urine Specimen
Ex. 17: Microbiota of the Mouth
Unbrushed teeth is an accumulation of a biofilm
Cariogenic- Ability to cause dental Carries
*lactobacillus acidophilus, streptococcus mutans (S. Gordonii, S.
salivarius) & actinomyces odontolyticus
Ferment carbohydrates  Lactic Acid
Lowering the pH at the surface of the Enamel which can
decalcify the enamel & lead to cavities
S. Mutans produce enzyme Dextransucrase which
polymerizes sucrose to form a polysaccharide called Glucan
L. Acidophilus produces similar polymer Lexan
Glucan & Lexan are both Glycocalyces
Snyder Test
Determine a Persons Susceptibility to dental caries
based on acid production that is assumed to be a result of the
growth of lactobacilli
Ingredients Select: 2% glucose & pH of 4.8
Low pH inhibits growth of most organisms but is ideal for lactobacilli
Indicator Differential: Bromcresol Green (4.84.4)
* Green  Yellow
Green = Slight
Yellow = High
Slight mild Moderate High
Fermenting to Yellow
Ex. 18: Microbiota of the Throat & Skin
Blood Agar
Differentiate: Streptococcus
S. Pyogens  Beta Hemolysis (Burst)
S. mutans, S. gordanii, S. salivarius  Alpha Hemolysis (almost)
Chocolate Blood Agar
NOT selective
“lysed Boiled Red blood Cells”
Allows growth of Neisseria & Moraxella
Oxidase Reagent Detects (Cytochrome C)  Turn Purple 30s
Common in young Adults as normal microbiota
Neisseria &
Moraxella
Oxidase Reagent Detects
(Cytochrome C)
Streptococcus
Pyogens
Beta
S. mutans
S. gordanii
S. salivarius
Alpha
MSA Plate
Select: Staphylococcus/ Halotolerant “7.5% NaCl”
Differentiate: Mannitol Ferment “pH indicator Phenol Red”
Staphylococcus Epidermidis (drier)  Does not Ferment
Staphylococcus Aureus (moist)  Ferments
M-H Tellurite Plate
Select: Corynebacterium Diptheroids
Present produce gray/Black colonies
Tellurite in the media is reduced intracellularly  Tellurium (grey precipitate)
“Back of ear”“arm… used 0.85% saline swab”
Corynebacterium
Diptheroids
Staphylococcus
Aureus
Staphylococcus
Epidermidis
Environmental
Organisms
Sabouraud agar
Fungi (yeast or Mold)
Selects: Acidophiles (acidic Medium pH5.5)
Nutrient Agar Plate
Not Selective or Differential  Acidophils will not grow
Acidophil grows
(Fungi)
UTI’s
Urethritis: Infection of the Urethra
Cystitis: Infection of the urinary bladder
Pyelonephritis: Infection involving kidneys
* Caused by … E. Coli, Staphylococcus Aureus,
Enterococcus Faecalis, Proteus mirabilis & P. Vulgaris
Micturition in to a Cup  Midstream *adequate cleaning
of the genitals
HardyCHROM is a Non-selective/ differential
Ingredients: Peptones, Proprietary blend of chromogenic
substrates & indicators that cause different organisms to
produce different colored colonies
# 𝒐𝒇 𝒄𝒐𝒍𝒐𝒏𝒊𝒆𝒔
𝟎.𝟎𝟏𝒎𝒍
=
𝑪𝑭𝑼
𝒎𝒍
Critical threshold = 1*105 bacteria per ml of urine
Early phase of UTI = 1*102 to 1*104
Ex. 19:Cultivation of Urine Specimen
Klebsiella
Dark Blue/Indigo
Cirobacter
Dark Blue With pink Halo
E. Coli
Rose/Magenta
Protease Vulgaris
Blue/Green with Orange Halo
Pseudomonas
Colorless
Enterococcus Faecalis
Teal/Turquoise
Station 2: Skin Microbiota
1) What genus of the skin microbiota does the MSA select for? Staphylococcus
2) What species of the skin microbiota is growing on sector A? Aureus
3) What species of the skin microbiota is growing on sector B? Epidermidis
4) Give the common name & genus of the bacteria growing on the MHT plate Diphtheria
colonies, Corynebacterium
5) What is the name of the metal in this plate that selects for the bacteria on MHT? Tellurite
Station 1: Microbiota of the Mouth
1) What is the name of the agar we use to test for susceptibility to dental caries? Snyder deep agar
2) What genus of bacteria does this agar test for? Lactobacillus, Streptococcus & acintomyces
3) What makes this agar selective? The pH from 2% glucose
4) What carbohydrate is in this agar? Glucose
5) What is the name of the ph indicator in this agar? Bromersol Green
6) what causes the color of the agar to change from green to yellow? Color change is caused by acid
production
Station 3: Throat Microbiota
1) Name the species of throat microbiota that is growing on this blood plate? Pyogenes (Beta Hemolytic)
2) What is the main ingredient in chocolate agar? Lysed boiled red blood cells
3) What genus of throat microbiota doe we culture on chocolate agar? Neisseria & Moraxella
4) What reagent has to be added to the growth on the plate to detect this genus? Oxidase Reagent
Station 4: Urine Cultures
1) Name the pathogen growing on sector A of the HardyCHROM plate? Escherichia Coli
2) Name the pathogen growing on Sector B of the HardyCHROM plate? Cirobacter
3) 0.01ml of a urine specimen is streaked onto a nutrient agar plate, and after incubating the plate
overnight at 3 7 degrees C. 263 colonies are present on the plate. Calculate how many bacteria
were in the patients urine sample. Does the value mean that the patient has a UTI?
263
.01
= 26,300  2.63 * 104 NO UTI less than 105
Snyder: Selective & Differential
MSA: Selective & Differential
MHT: Selective
Blood: Differential
Chocolate: Differential
Sabouraud: Selective
Nutrient: Neither
E. Coli
Rose/Magenta
Cirobacter
Dark Blue With pink Halo

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Ilovemicrobiology!!!!!! Ilana kovach

  • 1. Microbiology Practical 1 Ilana Kovach Live, laugh, love and learn “There is no threshold limit to the capacity of the human mind – the girl who made this crazy powerpoint”
  • 2. Gram Positive Cocci Staphylococcus aureus(BSL-2) Staphylococcus xylosus (BSL-1) Staphylococcus epidermidis(BSL-1) Streptococcus pyogenes(BSL-2) Streptococcus mutans (BSL-1) Streptococcus zooepidemicus (BSL-2) Enterococcus faecalis (BSL-2) Micrococcus luteus (BSL-1) Gram Positive Rods Bacillus cereus (BSL-2) Bacillus subtilis (BSL-1) Bacillus megaterium (BSL-1) Bacillus stearothermophilus (BSL-1) Clostridium sporogenes (BSL-1) Diptheroids Mycobacterium smegmatis (BSL-1) Gram Negative Rods Alcaligenes faecalis (BSL-1) Enterobacter aerogenes (BSL-1) Escherichia coli(BSL-1) Morganella morganii(BSL-2) Pseudomonas aeruginosa(BSL-2) Pseudomonas fluorescens(BSL-1) Serratia Marcescens(BSL-1) Gram Positive Cocci Neisseria species (G- negative cocci) Saccharomyces cerevisiae(BSL-1)
  • 4. Aseptic Technique “Pathogen free environment” Beginning of Lab 1.) Put away Belongings 2.) Clean Tables 3.) wash Hands 4.) Tie back long Hair BSL-1 (Low risk) Doesn’t cause disease in healthy humans *Lab Coats BSL-2 (moderate risk) associated in moderate disease in humans *Lab coats & Disposable Gloves  Googles required when using chemicals (Example Gram staining) Opportunistic doesn’t typically cause disease in healthy adults, but may in immunocompromised adults or children 4 potential routes of Exposure: 1. Absorption Through skin or mucous membranes 2. Inhalation 3. Ingestion 4. Inoculation
  • 5. Bacterial Specimen info: Name of Microorganism Your name/Initials Date Tape labels are required for media in Test Tubes (White) Carry Test tubes  Incubator Test Tube rack (M/W class Yellow) Tape petri dishes on both ends before carrying them to incubator Disposal of contaminated items: Petri plates  Biohazard waste Glass pipettes  Pipette discard box Test tubes  Test tube discard bin Glass slides SHARPS box Gloves  Biohazard waste Plastic ware  Biohazard waste Broken test tubes  SHARPS box Regular Trash uncontaminated items & Paper towels End of Lab disinfect tables & wash your hands
  • 7. Arrangement of Prokaryotic Cells Cocci  multiple Planes Bacilli  single Planes Coccus Diplococci Staphylococci Streptococci Sarcina Tetrad Coccobacillus Bacilli Diplobacilli Palisades Streptobacilli
  • 8. 3 main Prokaryotic Cell shapes Cocci Spirals 1. Spirochetes  Flexible 2. Spirillum  Inflexible Rods “Bacillis” Coccobacillus “Short Rod” Vibrio “Curved Spiral” Pleomorphic “Does not Have a shape”
  • 9. Oculars Arm Objective Lenses Nose Piece Body Base Fine Focus Coarse focus Stage Light Source (Illuminator) Condenser & Iris Diaphragm (underneath Microscope Skills Oil Immersion: Apply between 40x and 100x Specimen in Field of View & in Focus: Trick Bring the Edge of the slide into focus should appear as 3-D Light Level: light source (Illuminator)switchturns light source at base; Condenser collects& concentrates light from the illuminator& directs it to the irisdiaphragm Clean Up: oil Immersioncleaned from all lenses & Stage Slide removed, Placed in 4x, Stage Lowered & Centered. Identify: Gram positive/Negative,Morphology, Total Magnification
  • 10. Ex. 2 Gram Stain Escherichia Coli “Rod”  Gram Negative (Pink) Bacillus subtilis “Rod”  Gram Positive (Purple) Staphylococcus Xyolus “Spherical”  Gram Positive (Purple)
  • 11. Gram Positive Gram Negative Teichoic Acid Lipoteichoic Acid Peptidoglycan Layer (cell wall) Cytoplasmic Membrane Integral Protein Peptidoglycan Layer of (cell wall) Cytoplasmic Membrane Outer Membrane of Cell Porin Periplasmic Space Lipopolysaccharide Layer (LPS) Containing Lipid A
  • 12. Heat fix  Kills the microbes  Makes microbes more permeable to stains  Fixes microbes to slide Why dry before Heat fixing? If heated right after the water would cause the smear to overheat & denature some features in the stain. Bacterial Smear A smear is a small volume (Loopful) of specimen- containing medium that is spread (smeared) onto microscope slide
  • 13. Week 2 Capsule Stain Acid Fast Stain Endospore Stain
  • 14. Ex. 3 Capsule Stain  Klebsiella Pneumoniae  Capsule is Halo around the cell Heat & water would dislodge Capsule from bacteria (polysaccharide, Polypeptide, Glycoprotein) Need t Air Dry
  • 15. Ex. 4 Acid-Fast Stain  Myobacterium smegmatis (Acid Fast Cells)  Bacillus Subtilis (Non Acid fast cells)
  • 16. Ex. 5 Endospore Stain(Bacillus & clostridium)  Bacillus Subtilis as Vegatative Cells  Bacillus Subtilis Vegetative cells with Endospore inside  Bacillus Subtilis as a Free Spore
  • 17. Endospores (Bacillus & Clostridium) Outer Spore Coat (Exosporium) Outer Spore Coat (Exosporium) Spore Coat Outer Membrane Cortex Spore Core Inner Membrane
  • 18. Week 3 Culture Transfer Technique Isolation of Pure Cultures Viable Plate Count Culture Characteristics
  • 19. Ex. 6 Culture Transfer Technique  Broth  Deep (Needle Single Slob)  Broth  Slant (Loop Zig Zag)  Slant  Broth (Loop Swish) All Caps loose but secure Incubate 25º SlantSlant Broth BrothBrothDeep
  • 21. Ex. 7 Pure Isolation Cultures Ilana Kovach (09/02/15) Serratia Marcescens & Escherichia Coli 21 34  Incubate upside down to prevent condensation at 25º  Tape both ends Warning: Sterilize after each streak & DO NOT reapply more bacteria!!!
  • 22. Results The purpose of this method is to isolate pure colonies of Bacteria
  • 23. Ex. 8 Viable Plate count 10-1 10-2 10-3 10-4 10-5 10-6 10-7 10-810-710-6
  • 24. Results 10-8 10-7 More than 300 =TNTC Less than 30 = TFTC
  • 25. Ex. 9 Growth Characteristics of Colonies & Broth Cultures Micrococcus Luteus Size: 1.5mm Pigmentation: Cream Form: Circular Elevation: Flat Margin: entire Size: 5mm Pigmentation: Yellow Form: Circular Elevation: Umbonate Margin: Entire Size: 2mm Pigmentation: Green Form: Irregular Elevation: Pulvinate Margin: Erose
  • 26. Ex. 9 Growth Characteristics of Colonies & Broth Cultures Escherichia Coli Bacillus Cereus Size: 4mm Pigmentation: Cream Form: Irregular Elevation: Convex Margin: Undulate Size: 3mm Pigmentation: Cream Form: Filamentous Elevation: Flat Margin: Erose
  • 28. Name of Specimen in Broth Growth Pattern Descriptions Bacillus Cereus Little Sediment; Mostly Fine Mycobacterium Smegmatis Sediment Pseudomonas Aeruginosa Sediment Saccromyces Cerevisiae Little Sediment; Mostly fine Serratia Marscens Fine
  • 29. Sediment: Myobacterium Smegmatis Pseudomonas Aeruginosa Mostly Fine/little Sediment: Bacillus Cereus Saccharomyces Cerevisiae Fine Pellicle Sediment Flocculent “Flaky”
  • 30. Identify the type of Media in each tube? 1) Broth 2) Slant 3) Deep Based on the results of this four way isolation streak, what do you think this student may have done incorrectly during his or her four way streak procedure? They either did not sterilize the loop between each quadrant or they reapplied the bacteria after each Quadrant streak Observe this Circled colony on this agar plate. Using this provided diagram as a guide. Determine the following characteristics? Size: 5mm Margin: Entire Pigmentation: Cream Color Elevation: Convex Form: Circular Observe this Circled colony on this agar What type of Growth pattern is shown in this test Tube Fine with a little bit of sediment at the bottom
  • 31. Week 4 Effects of Temperature on Microbial Growth Oxygen Requirements Growth of Anaerobic Organisms
  • 32. Ex. 10 Effects of Temperature on Microbial Growth 4 nutrient Agar Plates Split into 5 Incubators: 4◦C, 25◦C, 37◦C & 45◦C
  • 34. Psychrophiles Cold ~ (-5- 20º); optimal: 10º Mesophiles Moderate ~ (20º-45º); optimal: 37º Thermophiles Hot ~ (Low 45’s – 80’s) Hyperthermophiles HOT!! (80’s & some up to 105º)) Escherichia Coli Micrococcus Luteus Serratia Marcescens Saccharomyces Cerevisiae Bacillus Stearothermophilus
  • 35. Ex. 11 Oxygen Requirements Obtain Melted BHI from water Bath While BHI tube is still liquefied add 2 drops of the appropriate inoculum in (brain Heart infusion) BHI tube using a sterile Pasteur Pipette; Cap should be loose (but secure) Roll BHI tube between palms of your hands to disperse the bacteria throughout the tube, taking care not to create bubbles or aerate the agar Place BHI tube in ice bath until solidify 37ºC incubator
  • 36. Results Bacillus Subtilis Obligate Aerobe Crinkle at top (Bacteria Wants O2) Saccharomyces Cerevisiae Microaerophile Toward the Top Concaved Specks toward the Bottom Clostridium Sporogenes Obligate Anaerobe Serratia Marcescens Film at top Specks Throughout the medium
  • 37. Staphylococcus Xylosus Enterococcus Faecalis Aerotolerant Micrococcus Luteus Obligate Aerobe Mycobacterium Smegmatis Obligate Aerobe Toward the Top NO speck Within the Media Film at top Specks throughout the medium When held to light Speck throughout Medium No film on top (Evenly Distributed)
  • 39. Obligate (Strict) Aerobes Requires O2  Undergo Aerobic Respiration  Oxygen finalElectron Acceptor Microaerophil Require lower O2 levels (2-10%)  Undergo Aerobic Respiration  Limited abilityto detoxifyhydrogen peroxide and superoxideRadicals Facultative (Facultative Anaerobes) Can Live either Presence OR absence of O2 (Prefer Oxygen)  Aerobic Respiration  Anaerobic Respiration  Fermentation Aerotolerant Can live in either Presence or Absence of Oxygen (Doesn’t Prefer Oxygen)  Never use Aerobic metabolism  Have enzymes that neutralizetoxicoxygen Obligate (Strict) Anaerobes O2 is Deadly  Use anaerobic Metabolism  Lack Enzymes to neutralizetoxicoxygen Oxygen Requirements
  • 40. Ex. 12 Growth of Anaerobic Organisms Gaspak Jar The Hydrogen gas combines with free oxygen in the chamber to produce water. The Reaction is Catalyzed by palladium which is attach to the underside lid of the Jar . The carbon dioxide replaces the removed oxygen creating a completely anaerobic environment 2H2 + O2  2H2O Pseudomonas Aeruginosa Bacillus Subtilis Escherichia Coli Clostridium Sporogenes Envelope: Sodium Borohydride  H2 (Hydrogen Gas) Sodium Bicarbonate  CO2 (Carbon Dioxide)
  • 41. Results Candle Jar Growth Should Occur Under Anaerobic Conditions: Facultative Escherichia Coli Obligate Anaerobe Clostridium Sporogenes Clostridium Sporogenes “Obligate Anaerobe” Escherichia Coli “Facultative”
  • 42. Results 37ºC incubator Notice Growth Did NOT occur for Obligate Anaerobe Clostridium Sporogenes Escherichia Coli Can’t Grow
  • 43. Ex. 12 Growth of Anaerobic Organisms 4 Thioglycollate Broth Tubes Pseudomonas Aeruginosa Bacillus Subtilis Escherichia Coli Clostridium Sporogenes Pink = Oxygen Yellow = No Oxygen Resazurin The oxygen concentration at a given level is indicated by a redox sensitive dye that turns pink in the presence of oxygen Sodium Thioglycollate Consumes Oxygen
  • 44. Results Pseudomonas Aeruginosa Obligate Aerobe Bacillus Subtilis Obligate Aerobe (Gravity Pulls Down Dead Bacteria) Escherichia Coli Clostridium Sporogenes Obligate Anaerobe Toward the Top Bacteria on Top Dead Bacteria Throughout (But Prefer O2) Toward the Bottom
  • 45. Identify the Oxygen Class & any Example Genus +Species 1) Aerotolerant Enterococcus Faecalis 2) Obligate Aerobe Bacillus Subtilis 3) Microaerophil Saccharomyces Cerevisiae 4) Facultative Escherichia Coli 5) Obligate Anaerobe Clostridium Sporogenes Indicate Temperature Class Name the Chemical that is the reducing agent in the Media? Sodium Thioglycollate Name the chemical in this media that changes color depending on whether or not oxygen is present Resazurin Oxygen Class Tube A Facultative Oxygen Class Tube B Aerotolerant Observe this Circled colony Name 2 chemicals in Gas Pak Envelope 1) Sodium Bicarbonate 2) Sodium Borohydride 2 chemicals Produced when chemicals in Envelope are Activated CO2 & O2 Write Equation that occurs in GASPAK Jar that removes O2 and makes chamber Anaerobic 2H2 + O2 2H2O (Pallidium Catalyst) 4◦C 25◦C 37◦C 55◦C Temperature Class A - + - - Mesophile B + + - - Psychrotroph C - - - + Thermophile D - + + - Mesophile E + - - - Psychrophile
  • 46. Week 5 Selective & Differential media Chemical control of Microorganisms Chemotherapeutic agents Additive & synergistic effects on Antibiotics
  • 47. Ex. 13: Use of Selective, Differential & Enriched Media Mannitol Salt Agar Selective: 7.5% NaCl Halotolerants Differential: Carbohydrate Substrate Mannitol & “phenol Red” (Ability to ferment mannitol) Red Yellow fermentation No fermentation Staphylococcus xylosus Enterococcus faecalis Staphylococcus epidermidis
  • 48. Blood Agar Differential ONLY: Hemolysis  some bacteria produce exotoxins that cause lysis of RBC Beta (Burst): Complete Clearing of Blood around colonies Alpha (almost): Partial lysis Greenish-Yellow Discoloration Gamma: No lysis Streptococcus mutans GammaAlphaBeta Enterococcus faecalis Staphylococcus Xylosus Streptococcus Zooepidmicus
  • 49. Columbia C-NA agar Selective: Colistin + Nalidixic Acid Gram Positive Differential: Blood agar Beta, Alpha, Gamma Alpha Enterococcus Faecalis Staphylococcus xylosus Beta
  • 50. MacConkey Agar  Selective: Crystal Violet & Bile Salts Gram Negative  Differential: Substrate Lactose & pH indicator “Neutral Red” RED  Pink Escherichia Coli Enterobacter aerogenes Morganella Morganii
  • 51. Eosin Methylene Blue Agar  Selective: Eosin + Methylene Blue Gram Negative  Differential: Substrate Lactose Pink Small amount of acid Greenish Large amount of acid Escherichia Coli Enterobacter aerogenes Morganella Morganii
  • 52. Ex. 14: Chemical Control of Microorganisms Measuring Zone of Inhibition Bleach Lab Cleanerisopropanol Vinegar
  • 53. Ex. 15: Chemotherapeutic Agents E test Antibiotic: Trimethoprim & sulfa TS MIC  .047 Susceptible S < R > Ampicillin (AM) 8 8 Daptomycin (DPC) 1 1 Imipenem (IP) 2 8 Tetracycline (TC) 1 2 Trigecycline (TGC) 1 2 Trimethoprim & Sulfa (TS) 2 4
  • 54. antibiotic Inhibition zone diameter Susceptible/ intermediate/ resistant Nalidixic acid (NA30) 11mm Resistant Trimethoprim/Sulfam ethoxazole (SXT25) 36mm Susceptible Gentamycin (CN10) 26mm Susceptible Vancomycin (VA30) 17mm Susceptible Penicillin (P10) 54mm Susceptible Cefoxitin (FOX30) 25mm Susceptible Tetracycline (TE30) 36mm Susceptible Azithromycin (AZM15) 25mm Susceptible Disk diffusion assay
  • 55. Disc Code Resistant (<mm) Intermediate (mm range) Susceptible (>mm) AZM15 13 14-17 18 CN10 12 13-14 15 VA30 Enterococcus 14 15-16 17 VA30 Other 9 10-11 12 P10 Staphylococcus 28 - 29 P10 Enterococcus 14 - 15 P10 Streptococcus 19 20-27 28 P10 Other 19 - 20 TE30 14 15-18 19 FOX30 14 15-17 18 SXT25 10 11-15 16 NA30 13 14-18 19
  • 56. Ex. 16: Additive & Synergistic Effects on Antibiotics Synergistic Additive “Overall no greater than the sum of individual antibiotic. Uniform” “Overall effect of antibiotic combination is greater than sum of individual antibiotic. Merge in the middle”
  • 57. Station 3: MSA plates 1) What does the MSA select for? Halotolerants 2) What are the selective ingredients of MSA? 7.5% sodium chloride 3) What is the carbohydrate in MSA? Mannitol 4) Does the bacteria growing in sector A ferment mannitol? YES 5) Does the bacteria growing on sector B ferment mannitol? NO 6) Give example of a bacterium that ferments mannitol and one that does not ferment mannitol a. Enterococcus Faecalis b. Staphylococcus Epidermis Station 1: EMB and MacConkey Plate 1) What does EMB and MacConkey Plates Select for? Gram – 2) What carbohydrates is in both EMB and MacConkey agar? Lactose 3) What are the selective ingredients in EMB agar? Eosin & Methylene Blue 4) What are the selective ingredients in MacConkey agar? Crystal Violet & Bile salts 1) What is the pH indicator in MacConkey agar? Neutral Red 2) Does the bacteria growing on sector A ferment Lactose? EMB (No) & MacConkey (No) 1) Does the bacteria growing on sector B ferment Lactose? EMB (Yes) & MacConkey Yes 1) Give an example of a bacteria that ferments lactose and one that does not ferment lactose a. Escherichia Coli b. Morganella Morganii
  • 58. Station 3: Mueller-Hinton Plates 1) Measure the zone of Inhibition SXT25 on the disk fusion plate? 23mm 2) Based on your measurement, is the bacteria on this plate susceptible, resistant or intermediate to this antibiotic. Susceptible 3) Measure the MIC at .032 on the E-test plate. .032 Station 4: CCNA plate 1) What does CCNA select for? Gram - 2) Name the two antibiotics that make CCNA agar selective Colistin & Nalidixic Acid 3) Identify the hemolysis pattern of the bacteria growing on sector A “alpha” 4) Identify the hemolysis pattern of the bacteria growing on sector B “Beta” 5) Give an example of (a) bacterium that is alpha hemolytic (b) Beta Hemolytic (c) Gamma hemolytic a. Enterococcus Faecalis (alpha) b. Staphylococcus xylosus (Beta) c. Streptococcus Mutans
  • 59. Week 6 Normal microbiota of the mouth Normal microbiota of the throat & Skin Cultivation of Urine Specimen
  • 60. Ex. 17: Microbiota of the Mouth Unbrushed teeth is an accumulation of a biofilm Cariogenic- Ability to cause dental Carries *lactobacillus acidophilus, streptococcus mutans (S. Gordonii, S. salivarius) & actinomyces odontolyticus Ferment carbohydrates  Lactic Acid Lowering the pH at the surface of the Enamel which can decalcify the enamel & lead to cavities S. Mutans produce enzyme Dextransucrase which polymerizes sucrose to form a polysaccharide called Glucan L. Acidophilus produces similar polymer Lexan Glucan & Lexan are both Glycocalyces
  • 61. Snyder Test Determine a Persons Susceptibility to dental caries based on acid production that is assumed to be a result of the growth of lactobacilli Ingredients Select: 2% glucose & pH of 4.8 Low pH inhibits growth of most organisms but is ideal for lactobacilli Indicator Differential: Bromcresol Green (4.84.4) * Green  Yellow Green = Slight Yellow = High Slight mild Moderate High Fermenting to Yellow
  • 62. Ex. 18: Microbiota of the Throat & Skin Blood Agar Differentiate: Streptococcus S. Pyogens  Beta Hemolysis (Burst) S. mutans, S. gordanii, S. salivarius  Alpha Hemolysis (almost) Chocolate Blood Agar NOT selective “lysed Boiled Red blood Cells” Allows growth of Neisseria & Moraxella Oxidase Reagent Detects (Cytochrome C)  Turn Purple 30s Common in young Adults as normal microbiota Neisseria & Moraxella Oxidase Reagent Detects (Cytochrome C) Streptococcus Pyogens Beta S. mutans S. gordanii S. salivarius Alpha
  • 63. MSA Plate Select: Staphylococcus/ Halotolerant “7.5% NaCl” Differentiate: Mannitol Ferment “pH indicator Phenol Red” Staphylococcus Epidermidis (drier)  Does not Ferment Staphylococcus Aureus (moist)  Ferments M-H Tellurite Plate Select: Corynebacterium Diptheroids Present produce gray/Black colonies Tellurite in the media is reduced intracellularly  Tellurium (grey precipitate) “Back of ear”“arm… used 0.85% saline swab” Corynebacterium Diptheroids Staphylococcus Aureus Staphylococcus Epidermidis
  • 64. Environmental Organisms Sabouraud agar Fungi (yeast or Mold) Selects: Acidophiles (acidic Medium pH5.5) Nutrient Agar Plate Not Selective or Differential  Acidophils will not grow Acidophil grows (Fungi)
  • 65. UTI’s Urethritis: Infection of the Urethra Cystitis: Infection of the urinary bladder Pyelonephritis: Infection involving kidneys * Caused by … E. Coli, Staphylococcus Aureus, Enterococcus Faecalis, Proteus mirabilis & P. Vulgaris Micturition in to a Cup  Midstream *adequate cleaning of the genitals HardyCHROM is a Non-selective/ differential Ingredients: Peptones, Proprietary blend of chromogenic substrates & indicators that cause different organisms to produce different colored colonies # 𝒐𝒇 𝒄𝒐𝒍𝒐𝒏𝒊𝒆𝒔 𝟎.𝟎𝟏𝒎𝒍 = 𝑪𝑭𝑼 𝒎𝒍 Critical threshold = 1*105 bacteria per ml of urine Early phase of UTI = 1*102 to 1*104 Ex. 19:Cultivation of Urine Specimen
  • 66. Klebsiella Dark Blue/Indigo Cirobacter Dark Blue With pink Halo E. Coli Rose/Magenta Protease Vulgaris Blue/Green with Orange Halo Pseudomonas Colorless Enterococcus Faecalis Teal/Turquoise
  • 67. Station 2: Skin Microbiota 1) What genus of the skin microbiota does the MSA select for? Staphylococcus 2) What species of the skin microbiota is growing on sector A? Aureus 3) What species of the skin microbiota is growing on sector B? Epidermidis 4) Give the common name & genus of the bacteria growing on the MHT plate Diphtheria colonies, Corynebacterium 5) What is the name of the metal in this plate that selects for the bacteria on MHT? Tellurite Station 1: Microbiota of the Mouth 1) What is the name of the agar we use to test for susceptibility to dental caries? Snyder deep agar 2) What genus of bacteria does this agar test for? Lactobacillus, Streptococcus & acintomyces 3) What makes this agar selective? The pH from 2% glucose 4) What carbohydrate is in this agar? Glucose 5) What is the name of the ph indicator in this agar? Bromersol Green 6) what causes the color of the agar to change from green to yellow? Color change is caused by acid production Station 3: Throat Microbiota 1) Name the species of throat microbiota that is growing on this blood plate? Pyogenes (Beta Hemolytic) 2) What is the main ingredient in chocolate agar? Lysed boiled red blood cells 3) What genus of throat microbiota doe we culture on chocolate agar? Neisseria & Moraxella 4) What reagent has to be added to the growth on the plate to detect this genus? Oxidase Reagent
  • 68. Station 4: Urine Cultures 1) Name the pathogen growing on sector A of the HardyCHROM plate? Escherichia Coli 2) Name the pathogen growing on Sector B of the HardyCHROM plate? Cirobacter 3) 0.01ml of a urine specimen is streaked onto a nutrient agar plate, and after incubating the plate overnight at 3 7 degrees C. 263 colonies are present on the plate. Calculate how many bacteria were in the patients urine sample. Does the value mean that the patient has a UTI? 263 .01 = 26,300  2.63 * 104 NO UTI less than 105 Snyder: Selective & Differential MSA: Selective & Differential MHT: Selective Blood: Differential Chocolate: Differential Sabouraud: Selective Nutrient: Neither E. Coli Rose/Magenta Cirobacter Dark Blue With pink Halo