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Eindhoven Edition
[object Object],e-Science is about global collaboration in key areas of science, and the next generation of infrastructure that will enable it.
How do we know when e-Science has succeeded? Not just  accelerated  but  new A. When everyone is using the Grid B. When there are routine scientific advances that would not have happened otherwise
How do we move from heroic scientists doing heroic science with heroic infrastructure to everyday scientists doing science they couldn’t do before? humanists archaeologists geographers musicologists ... researchers! research It’s the democratisation of e-Research  
scientists Digital Libraries Graduate Students Undergraduate Students experimentation Data, Metadata Provenance Workflows Ontologies The social process of science Local Web Repositories Virtual Learning Environment Technical Reports Reprints Peer-Reviewed Journal & Conference Papers Preprints & Metadata Certified Experimental Results & Analyses
[object Object],[object Object],[object Object],[object Object]
[object Object],[object Object],[object Object],[object Object],Everyday researchers doing everyday research 1
[object Object],[object Object],[object Object],A data-centric perspective, like researchers 2
[object Object],[object Object],[object Object],[object Object],Collaborative and participatory 3
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Benefitting from the scale of digital science activity to support science  4
[object Object],[object Object],[object Object],[object Object],[object Object],Increasingly open 5
[object Object],[object Object],[object Object],[object Object],Better not Perfect 6
[object Object],[object Object],[object Object],Empowering researchers 7
[object Object],[object Object],[object Object],About pervasive computing 8
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Signs of the Times
[object Object],[object Object],[object Object],Onward and Upward “ Standing on the shoulders of giants” www.w3.org/2007/Talks/www2007-AnsweringScientificQuestions-Ruttenberg.pdf (Everyday researchers are giants too)
Note to Reader. The next slides are not intended to be  anti-grid. Everyone working on Grid is doing great work.
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],The Grid Problem
e-Science Pipeline e-Science Technology Creators & Integrators Applications Research EE Research Socio-economic & Commercial Innovation e-Science bespoke tailoring Mass Use by Researchers 5 years 5 years 5 years CS Research e-Science 10s of integrators 100s of embedded consultants 1000s of research users The Arrow Problem Malcolm Atkinson NB This isn’t wrong!
[object Object],Think  roll-in  of researchers... Mass Use by Researchers Knowledge co-production vs Service Delivery! Mass Use by Researchers
Web Services RESTful APIs cmd lines ssh http Web Browser Mobile phone iPod Car Equipment PDA P2P OeRC mashups workflows services applications Subject ICT experts Computer  Scientists Software Companies Workflow tools Ruby on Rails ecosystem Scientists open source Software Engineers nesc
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],For a flourishing ecosystem...
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],But what about Web 2.0?!
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Signs of the Times The Long Tail Data is the Next Intel Inside Users add value Network effects by default Some Rights Reserved The Perpetual Beta Cooperate, don’t Control Software above the level of the single device Web 2.0 patterns www.oreilly.com/pub/a/oreilly/tim/news/2005/09/30/what-is-web-20.html
 
use Web 2.0 here? Grid
use Web 2.0 here? Grid
use Web 2.0 here Grid Grid cloud HPC
A  utility is a directly and immediately useable service  with established functionality, performance and dependability, illustrating the emphasis on user needs and issues such as trust Services are knowledge-assisted  (‘semantic’) to facilitate automation and advanced functionality, the knowledge aspect reinforced by the emphasis on delivering high level services to the user The  architecture comprises   services  which may be instantiated and assembled dynamically, hence the structure, behaviour and location of software is changing at run-time Service-Oriented Knowledge Utility semanticgrid.org/NGG3
If you peel back the label and its says “Grid” or “OGSA” underneath… its not a cloud.  If you need to send a 40 page requirements document to the vendor then… it is not cloud. If you can’t buy it on your personal credit card… it is not a cloud If they are trying to sell you hardware… its not a cloud. If there is no API… its not a cloud. If you need to rearchitect your systems for it… Its not a cloud. If it takes more than ten minutes to provision… its not a cloud. If you can’t deprovision in less than ten minutes… its not a cloud. If you know where the machines are… its not a cloud.  If there is a consultant in the room… its not a cloud. If you need to specify the number of machines you want upfront… its not a cloud. If it only runs one operating system… its not a cloud. If you can’t connect to it from your own machine… its not a cloud. If you need to install software to use it… its not a cloud. If you own all the hardware… its not a cloud. James Governor
Multicore chips will offer so much performance that we need not cobble together heterogeneous resources but rather can deploy simple powerful systems Geoffrey Fox
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Myths
N 2 N N
One Middleware 2N N N
Middleware ? N N Middleware Middleware Middleware Middleware Middleware Polynomial involving N1, N2 and M
www.myexperiment.org
[object Object],[object Object],[object Object],[object Object],E. Science laboris  Carole Goble
[object Object],[object Object],[object Object],[object Object],[object Object],Recycling, Reuse, Repurposing
40 Taverna downloads per day taverna.sourceforge.net 2007 2006 2005 2004 2003
[object Object],[object Object],[object Object],[object Object],[object Object],The Superclient
Kepler Triana BPEL Ptolemy II
myExperiment.org is… ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],myExperiment.org is...
 
Google Gadget
Ownership and Attribution
24/5/2007  |  myExperiment  |  Slide
` Enactor HTML XML Snapshot map of resources with their relationships and versions users descriptions groups friendships tags blobs workflows
scientists Graduate Students Undergraduate Students experimentation Data, Metadata Provenance Workflows Ontologies Digital Libraries The social process of science 2.0 Local Web Repositories Virtual Learning Environment Technical Reports Reprints Peer-Reviewed Journal & Conference Papers Preprints & Metadata Certified Experimental Results & Analyses
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Take Homes 2.0
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Provenance Harvesting myExperiment metadata bus ORE Encapsulated myExperiment Object (EMO) Metadata RDF Store
[object Object],OAI-ORE Object Exchange and Reuse
Anatomy of an EMO EMO Metadata creator, modified, rights   URIs into myExperiment(s) with types and comments   workflow, data, description URIs to external resources, with alternates, types, comments, versions Optional annotations of URIs and their relationships
Linked Data
[object Object],RESEARCH DAILY British Scientists revealed today that Taverna is in fact a functional language. In a police statement, Taverna creator Tom Oinn said “it’s a fair cop guv”... Advertisement New Improved Closurize and Concentrate   TM Add Lambda Calculus to your Lambda Network!  Satisfaction guaranteed in several different colours
Original workflow High-level design of quality filter Compilation to quality workflow Integration New quality filter Quality-aware workflow Declarative  specification ,[object Object],[object Object],[object Object],[object Object],Quality Workflows Paolo Missier
Malcolm Atkinson

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Gridforum David De Roure Newe Science 20080402

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  • 3. How do we know when e-Science has succeeded? Not just accelerated but new A. When everyone is using the Grid B. When there are routine scientific advances that would not have happened otherwise
  • 4. How do we move from heroic scientists doing heroic science with heroic infrastructure to everyday scientists doing science they couldn’t do before? humanists archaeologists geographers musicologists ... researchers! research It’s the democratisation of e-Research 
  • 5. scientists Digital Libraries Graduate Students Undergraduate Students experimentation Data, Metadata Provenance Workflows Ontologies The social process of science Local Web Repositories Virtual Learning Environment Technical Reports Reprints Peer-Reviewed Journal & Conference Papers Preprints & Metadata Certified Experimental Results & Analyses
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  • 17. Note to Reader. The next slides are not intended to be anti-grid. Everyone working on Grid is doing great work.
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  • 19. e-Science Pipeline e-Science Technology Creators & Integrators Applications Research EE Research Socio-economic & Commercial Innovation e-Science bespoke tailoring Mass Use by Researchers 5 years 5 years 5 years CS Research e-Science 10s of integrators 100s of embedded consultants 1000s of research users The Arrow Problem Malcolm Atkinson NB This isn’t wrong!
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  • 21. Web Services RESTful APIs cmd lines ssh http Web Browser Mobile phone iPod Car Equipment PDA P2P OeRC mashups workflows services applications Subject ICT experts Computer Scientists Software Companies Workflow tools Ruby on Rails ecosystem Scientists open source Software Engineers nesc
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  • 26. use Web 2.0 here? Grid
  • 27. use Web 2.0 here? Grid
  • 28. use Web 2.0 here Grid Grid cloud HPC
  • 29. A utility is a directly and immediately useable service with established functionality, performance and dependability, illustrating the emphasis on user needs and issues such as trust Services are knowledge-assisted (‘semantic’) to facilitate automation and advanced functionality, the knowledge aspect reinforced by the emphasis on delivering high level services to the user The architecture comprises services which may be instantiated and assembled dynamically, hence the structure, behaviour and location of software is changing at run-time Service-Oriented Knowledge Utility semanticgrid.org/NGG3
  • 30. If you peel back the label and its says “Grid” or “OGSA” underneath… its not a cloud. If you need to send a 40 page requirements document to the vendor then… it is not cloud. If you can’t buy it on your personal credit card… it is not a cloud If they are trying to sell you hardware… its not a cloud. If there is no API… its not a cloud. If you need to rearchitect your systems for it… Its not a cloud. If it takes more than ten minutes to provision… its not a cloud. If you can’t deprovision in less than ten minutes… its not a cloud. If you know where the machines are… its not a cloud. If there is a consultant in the room… its not a cloud. If you need to specify the number of machines you want upfront… its not a cloud. If it only runs one operating system… its not a cloud. If you can’t connect to it from your own machine… its not a cloud. If you need to install software to use it… its not a cloud. If you own all the hardware… its not a cloud. James Governor
  • 31. Multicore chips will offer so much performance that we need not cobble together heterogeneous resources but rather can deploy simple powerful systems Geoffrey Fox
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  • 33. N 2 N N
  • 35. Middleware ? N N Middleware Middleware Middleware Middleware Middleware Polynomial involving N1, N2 and M
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  • 39. 40 Taverna downloads per day taverna.sourceforge.net 2007 2006 2005 2004 2003
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  • 41. Kepler Triana BPEL Ptolemy II
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  • 46. 24/5/2007 | myExperiment | Slide
  • 47. ` Enactor HTML XML Snapshot map of resources with their relationships and versions users descriptions groups friendships tags blobs workflows
  • 48. scientists Graduate Students Undergraduate Students experimentation Data, Metadata Provenance Workflows Ontologies Digital Libraries The social process of science 2.0 Local Web Repositories Virtual Learning Environment Technical Reports Reprints Peer-Reviewed Journal & Conference Papers Preprints & Metadata Certified Experimental Results & Analyses
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  • 51. Provenance Harvesting myExperiment metadata bus ORE Encapsulated myExperiment Object (EMO) Metadata RDF Store
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  • 53. Anatomy of an EMO EMO Metadata creator, modified, rights URIs into myExperiment(s) with types and comments workflow, data, description URIs to external resources, with alternates, types, comments, versions Optional annotations of URIs and their relationships
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