This document provides an overview of techniques for searching the literature for systematic reviews and meta-analyses. It discusses developing search concepts, using Boolean logic and vocabulary, searching databases like PubMed and Ovid MEDLINE, evaluating searches, and documenting the search process. Guidelines like PRISMA and the Cochrane Handbook provide standards for reporting search strategies and results. Citation management software like Endnote, Refworks, and Zotero can help organize references. Developing a thorough search across multiple sources is essential for a comprehensive systematic review.
Pune Call Girl Service ๐9xx000xx09๐Just Call Divya๐ฒ Call Girl In Pune No๐ฐAdva...
ย
Searching the Literature: Search Techniques and Construction
1. LECTURE 2: SEARCHING THE
LITERATURE: SEARCH
TECHNIQUES & CONSTRUCTION
Mark MacEachern, MLIS
2. Overview
๏จ Introductory items
๏จ Search construction
๏ค Concept building
๏ค Boolean logic
๏ค Vocabulary
๏ค Techniques
๏จ Sources
๏ค PubMed
๏ค Ovid MEDLINE
๏ค EMBASE
๏ค Grey literature
๏จ Search completion
๏ค Documentation
๏ค Reporting
๏ค Citation management
๏จ If time permits: Demonstration (from beginning to end)
3. Why search?
๏จ A high-quality lit search is essential for a successful meta-
analysis
๏จ It is from the search results that data is gathered for analysis
๏จ Failure to locate important studies can significantly affect
results
๏จ Remember the goal is to capture every relevant study
๏จ Important to report search so your methodology can be
reproduced
4. What to expect?
๏จ Expect 1000s of results
๏จ Expect to search multiple databases
๏ค Ovid, EMBASE, Cochrane, PubMed, etc.
๏จ Expect the search process to take weeks or months
๏จ Expect to publish search strategy and search methodology
๏จ Expect to consult a professional with search expertise (health
sciences librarian)
5. Search construction
๏จ Concept building
๏จ Boolean logic
๏จ Vocabulary
๏จ Techniques
๏จ Evaluating searches
6. Search construction: Concept building
๏จ Identify major concepts of topic
๏จ PICO helps for clinical questions
๏จ Example: Is the incidence of breast cancer greater in people
who are obese?
๏จ What are the major concepts?
๏ค Breast cancer
๏ค Obesity
๏ค Incidence
๏ค People
7. Search construction: Concept building
๏จ Alternate words / Synonyms
๏ค Obesity, obese, overweight, BMI, etc.
๏ค Breast cancer, breast neoplasms, breast tumors, etc.
๏ค Incidence, epidemiology
8. Search construction: Boolean Logic
๏จ AND Breast Obesity
Cancer
๏จ OR
Breast Obesity
Cancer
๏จ NOT
Breast Obesity
Cancer
9. Search construction: Boolean Logic
Concept 1 Concept 2 Concept 3
Breast cancer Obesity Incidence
OR OR OR
Breast neoplasms AND Obese AND Epidemiology
OR
OR
Overweight
Breast tumors
OR
BMI
(Concept 1a OR 1b OR 1c ) AND (Concept 2a OR 2b OR 2c) AND (Concept 3a OR 3b)
11. Search construction: Vocabulary
Keywords What are they?
๏จ Literal search
๏จ Looks for occurrences of words
When to use?
๏จ Current topics
๏จ Not easy to describe concepts
๏จ No vocabulary exists in database
Examples
๏จ Drug names (Lipitor, Prozac)
Controlled ๏จ Slang
vocabularies ๏จ Concepts (Swine flu, oil spill)
12. Search construction: Vocabulary
Keywords Pros
๏จ Very current projects/topics
๏จ No knowledge of controlled vocabulary
necessary
๏จ Slang
๏จ Broad, difficult to describe concepts
Cons
๏จ Not consistent (many variations)
๏จ Burden on enduser to discover synonyms
(might miss some)
Controlled ๏จ Too many (irrelevant) results
vocabularies ๏จ Difficult to limit results
13. Search construction: Vocabulary
Keywords What are they?
๏จ Set of words or phrases used to describe
concepts
๏จ Dictionary of accepted terms for a
database
When to use?
๏จ Searching a database that uses one
Examples
๏จ MeSH (Medical Subject Headings)
Controlled ๏จ EMTREE (Embase)
vocabularies
14. Search construction: Vocabulary
Keywords Pros
๏จ Burden on database to discover variations in
terms
๏จ Consistency & reproducible searches
๏จ Specific & targeted (increased relevancy)
Cons
๏จ Restrictive
๏จ Burden on enduser to learn vocabulary
๏จ Vocabularies differ (no consistency)
Controlled
vocabularies
20. Search construction: Techniques
๏จ Floating subheadings
Ovid MEDLINE (part of a search) PubMed (part of a search)
1. exp Arthritis, Rheumatoid/ ("inflammatory bowel diseases"[mesh] OR
2. exp Inflammatory Bowel Diseases/ "chronic ulcerative colitisโ OR cuc[title/abstract]
3. cuc.tw. OR crohn[title/abstract] OR "crohn'sโ
4. chronic ulcerative colitis.tw. [title/abstract] OR crohns[title/abstract] OR
5. crohn*.tw. ibd[title/abstract] OR "rheumatoid arthritisโ
6. ibd.tw. [title/abstract]) AND ("postoperative
7. rheumatoid arthritis.tw. complications"[mesh] OR "perioperative
8. or/1-7 care"[mesh] OR "surgery"[Subheading] OR
9. exp Postoperative Complications/ "post operative"[title/abstract] OR
10. exp Perioperative Care/ "postoperative"[title/abstract])
11. su.fs.
12. or/9-11
13. 8 and 12
21. Search construction: Filters
๏จ A predefined search designed to target specific study
methodologies (RCTs, Cohort, Systematic Reviews)
๏จ Use a validated filter (whenever possible)
๏จ Example: PubMed Clinical Queries โ Specific, Therapy
๏ค (randomized controlled trial[Publication Type] OR
(randomized[Title/Abstract] AND controlled[Title/Abstract] AND
trial[Title/Abstract]))
๏ค 93% Sensitive
๏ค 97% Specific
22. Search construction: Evaluation
๏จ Important to validate your search in each database
๏จ Make sure search captures all sentinel articles
๏จ How:
๏ค Cross search set of sentinel papers with your final search
๏ค (Set of Papers) NOT (Final Search)
๏จ Save searches for reporting
23. Sources
๏จ PubMed ๏จ Conference Papers Index
๏จ Ovid MEDLINE ๏จ ClinicalTrials.gov
๏จ EMBASE ๏จ Proquest Theses &
Dissertations
๏จ Scopus
๏จ CABI
๏จ Web of Science
๏จ Google Scholar
๏จ PsycINFO
๏จ Sociological Abstracts
๏จ CINAHL
๏จ And othersโฆ
๏จ Cochrane Database of
Systematic Reviews
24. Sources: PubMed (pubmed.gov)
๏จ Primary biomedical ๏จ Native interface for
database MEDLINE dataset
๏จ 20+ million citations ๏จ Citations indexed with MeSH
25.
26.
27.
28. Sources: Ovid MEDLINE
๏จ Different interface to search ๏จ Provides additional search
MEDLINE dataset functionality (adjacency)
๏จ Heavily used for systematic ๏จ Uses MeSH (like PubMed)
reviews
31. Sources: EMBASE
๏จ Similar to PubMed, Ovid ๏จ Uses EMTREE
๏จ Indexes many more ๏จ Includes MEDLINE, unless you
international journals than NOT out
MEDLINE
32.
33.
34. Sources: Grey literature
๏จ โInformation produced on all levels of government, academic,
business and industry in electronic and print formats not
controlled by commercial publishing, i.e., where publishing is
not the primary activity of the producing bodyโ
๏จ Types
๏ค Conference abstracts (Conference Papers Index)
๏ค Clinical trials (ClinicalTrials.gov)
๏ค Government reports, documents (.gov, CABI)
๏ค Dissertations (ProQuest Dissertations and Theses)
๏ค Unpublished manuscripts
35. Sources: Other options
๏จ Examine the references of articles of relevance
๏ค Included studies and relevant reviews
๏จ Use cited by features
๏จ Contact authors
๏จ Snowballing (esp for complex questions or interventions)
๏จ Contact companies, organizations, societies, etc
๏จ Hand search important journals (by Impact Factor, perhaps)
๏จ Search for ongoing studies (prelim data)
๏ค Clinicaltrials.gov ; controlled-trials.com (ISRCTN)
๏จ Citation tracking
37. Search Completion: Documentation
๏จ Important to document exact search terms
๏จ MeSH Terms?
๏จ Keywords?
๏จ Limits?
๏จ Filters?
๏จ Databases?
๏จ Dates?
๏จ Save strategy
38. Search completion: Reporting
๏จ See PRISMA statement
๏ค โThe aim of the PRISMA Statement is to help authors report a
wide array of systematic reviews to assess the benefits and
harms of a health care intervention. PRISMA focuses on ways in
which authors can ensure the transparent and complete reporting
of systematic reviews and meta-analyses.โ
http://www.prisma-statement.org/statement.htm
39. Search completion: Reporting
๏จ See Cochrane Handbook
๏ค http://www.cochrane-handbook.org/
๏ฎ Section 6.6
๏จ โIt should be borne in mind at the outset that the full search
strategies for each database will need to be included in an
Appendix of the review.โ
40. Search completion: Reporting
๏จ See Cochrane Handbook
๏ค http://www.cochrane-handbook.org/
๏ฎ Section 6.6
๏จ In study flow diagram:
๏ค number of unique records identified by the searches;
๏ค number of records excluded after preliminary screening (e.g. of titles and
abstracts); and
๏ค number of records retrieved in full text
41. Search completion: Reporting
๏จ See Cochrane Handbook
๏ค http://www.cochrane-handbook.org/
๏ฎ Section 6.6
๏จ In abstract:
๏ค List all databases searched.
๏ค Note the dates of the last search for each database or the period searched.
๏ค Note any language or publication status restrictions (but refer to Section 6.4.9).
๏ค List individuals or organizations contacted.โ
42. Search completion: Reporting
๏จ See Cochrane Handbook
๏ค http://www.cochrane-handbook.org/
๏ฎ Section 6.6
๏จ In methods:
๏ค List all databases searched.
๏ค Note the dates of the last search for each database AND the period searched.
๏ค Note any language or publication status restrictions
๏ค List grey literature sources.
๏ค List individuals or organizations contacted.
๏ค List any journals and conference proceedings specifically handsearched for the
review.
๏ค List any other sources searched (e.g. reference lists, the internet).
43. Search completion: Citation mgmt
Endnote Refworks Zotero
Cost $105 $0 (UM & alumni) $0
Web-based No (and yes) Yes Yes (Firefox,
Chrome, others)
Database imports 700+ 800+ Some (not EMBASE,
but YouTube,
Amazon)
Output styles 3700+ (customize) 800+ (customize) 1250+ (customize)
References Unlimited (100000) Unlimited Unlimited
Learning curve High Lowish Low
File attachments Yes Yes (limited space) Yes (not easy to
share)
Collaborate Best for single users; Shared account Public groups
Endnote web
Source: http://guides.lib.umich.edu/citationmanagement
44. Search completion: Citation mgmt
Endnote Refworks Zotero
Cost $105 $0 (UM & alumni) $0
Web-based No (and yes) Yes Yes (Firefox,
Chrome, others)
Database imports 700+ 800+ Some (not EMBASE,
but YouTube,
Amazon)
Output styles 3700+ (customize) 800+ (customize) 1250+ (customize)
References Unlimited (100000) Unlimited Unlimited
Learning curve High Lowish Low
File attachments Yes Yes (limited space) Yes (not easy to
share)
Collaborate Best for single users; Shared account Public groups
Endnote web
Source: http://guides.lib.umich.edu/citationmanagement
46. Recap
๏จ Spend time developing your search
๏จ Search multiple databases
๏จ Test your searches
๏จ Take notes during process to facilitate reporting
๏จ Consult an expert searcher
47. Thanks!
Mark MacEachern
Health Sciences Librarian
Taubman Health Sciences Library
markmac@umich.edu