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Jen Ferguson
A tale of two projects
               Why
                          02•13•2012
First, there was
                            Reuse & collaboration


Annotating data sets associated with published papers.
(Have you seen me?)
Paper   Microarray data set(s)




         Software
Here’s what comes out.
Switching gears S
              Why
Then there was
                             Reuse & collaboration


Creating an insanely great digital repository service.
The vision
     A repository robust and flexible enough to support storage,
     access, & discovery of the widest possible range of digital
     materials created and used at the university.


Meaning?
           Teaching materials              ✔
           Student portfolios & projects   ✔
           Research data                   ✔


                                           And more.
“We have to respect that most folks chose not to be librarians.”
The tech specs
  • Repository built in Fedora

  • Perl scripts (not people) do most of the metadata ‘dirty work’


The process
  • Meet with the client to determine needs & practices

  • Create a customized Perl module to unpack/wrangle data
A case in point
Late-breaking news:


   Got data!
isPartOf
JPG



                       isMemberOf                     isMemberOf       Faculty            isMemberOf   Learning
           Paper                             Papers                    member                           Object

PDF                             isMemberOf
       isPartOf                                                 isMemberOf



                       Paper
        isDataSetFor
                                                                         Data                           Other

                                isDataSetFor
                                                            isMemberOf               isMemberOf


                                                Dataset                                           Dataset
                                                                         isDerivativeOf



                                     isPartOf               isPartOf

                                             DAT          SPS
Summing up   U
Two very different approaches…




Created by scientists            Created by librarians

Specialized solution             Generalized solution

Discipline-specific              Discipline-agnostic

Globally focused                 Institutionally focused

‘Downstream’ intervention        ‘Upstream’ intervention

Metadata by external curator     Metadata by content creator
The good news
Thank you!




             j.ferguson@neu.edu
Sources

Harvard School of Public Health. “Harvard School of Public Health- HSPH”. October 13, 2011.
http://www.hsph.harvard.edu/

ISA Team. "Isa - About". October 6, 2011. http:// isatab.sourceforge.net/index.html.

Northeastern University. “Northeastern University: a leader in global experiential learning in Boston, MA”.
October 13, 2011. http://www.northeastern.edu/

Northeastern University – University Libraries. Annual Report: 2010. Available from:
http://www.lib.neu.edu/about_us/mission/documents/2010annualreport.pdf

United States National Library of Medicine. “Home – PubMed – NCBI”. October 13, 2011.
http://www.ncbi.nlm.nih.gov/pubmed/



Stock photos ‘Abacus’, ‘Chrome gear’, ‘Floppy disks’ and ‘Roll’ courtesy of stock.xchng. Available from:
http://www.sxc.hu/.

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Jen Ferguson "A tale of two projects"

  • 1. Jen Ferguson A tale of two projects Why 02•13•2012
  • 2. First, there was Reuse & collaboration Annotating data sets associated with published papers.
  • 4. Paper Microarray data set(s) Software
  • 7. Then there was Reuse & collaboration Creating an insanely great digital repository service.
  • 8. The vision A repository robust and flexible enough to support storage, access, & discovery of the widest possible range of digital materials created and used at the university. Meaning? Teaching materials ✔ Student portfolios & projects ✔ Research data ✔ And more.
  • 9. “We have to respect that most folks chose not to be librarians.”
  • 10. The tech specs • Repository built in Fedora • Perl scripts (not people) do most of the metadata ‘dirty work’ The process • Meet with the client to determine needs & practices • Create a customized Perl module to unpack/wrangle data
  • 11. A case in point
  • 12. Late-breaking news: Got data!
  • 13. isPartOf JPG isMemberOf isMemberOf Faculty isMemberOf Learning Paper Papers member Object PDF isMemberOf isPartOf isMemberOf Paper isDataSetFor Data Other isDataSetFor isMemberOf isMemberOf Dataset Dataset isDerivativeOf isPartOf isPartOf DAT SPS
  • 15. Two very different approaches… Created by scientists Created by librarians Specialized solution Generalized solution Discipline-specific Discipline-agnostic Globally focused Institutionally focused ‘Downstream’ intervention ‘Upstream’ intervention Metadata by external curator Metadata by content creator
  • 17. Thank you! j.ferguson@neu.edu
  • 18. Sources Harvard School of Public Health. “Harvard School of Public Health- HSPH”. October 13, 2011. http://www.hsph.harvard.edu/ ISA Team. "Isa - About". October 6, 2011. http:// isatab.sourceforge.net/index.html. Northeastern University. “Northeastern University: a leader in global experiential learning in Boston, MA”. October 13, 2011. http://www.northeastern.edu/ Northeastern University – University Libraries. Annual Report: 2010. Available from: http://www.lib.neu.edu/about_us/mission/documents/2010annualreport.pdf United States National Library of Medicine. “Home – PubMed – NCBI”. October 13, 2011. http://www.ncbi.nlm.nih.gov/pubmed/ Stock photos ‘Abacus’, ‘Chrome gear’, ‘Floppy disks’ and ‘Roll’ courtesy of stock.xchng. Available from: http://www.sxc.hu/.