11. UniProt
Name Description Source File size #triples
uniprot Protein annotation data UniProt consortium 14G 3.3 B
uniref Clusters of proteins with similar sequences UniProt consortium 7G 900M
uniparc Non-redundant archive of UniProt sequences UniProt consortium 65G 1B
citations Literature citations UniProt consortium 1355M 10,177,308
taxonomy Classification of organisms UniProt consortium 421M 5,041,437
journals Journals UniProt consortium 3M 34,850
pathways Pathways UniProt consortium 1000K 8,865
keywords Keywords UniProt consortium 940K 8,449
locations Subcellular locations UniProt consortium 468K 4,476
tissues TIssues UniProt consortium 572K 7439
components Cellular components (Organelles) UniProt consortium 6K 43
go Gene onotology SBI 25M 263,944
enzymes Classification of enzymes GO consortium 4M 4,476
core.owl Classes and properties for UniProt RDF UniProt consortium 152K
12. #triples
Sesame Java 70 M
4store C 15 B
5store C
Virtuoso C 15.4 B
Jena Java 1.7 B
Bigdata Java 12.7 B
ARC PHP
AllegroGraph Lisp 1B
http://esw.w3.org/LargeTripleStores
13. Protein UniProt
Components encodedIn
core.owl
<owl:ObjectProperty rdf:about="encodedIn">
<rdfs:label rdf:datatype="&xsd;string">encoded in</rdfs:label>
<rdfs:comment rdf:datatype="&xsd;string"
>The subcellular location where a protein is encoded.</rdfs:comment>
<rdfs:domain rdf:resource="Protein"/>
<rdfs:range rdf:resource="Subcellular_Location"/>
</owl:ObjectProperty>
14. RDF purl
http://purl.uniprot.org/{database}/{identifier}
UniProt
http://purl.uniprot.org/core/
Gene URI
http://purl.uniprot.org/core/Gene
type