The document describes a dataset of sea stars (Antarctic starfish) collected during the ANDEEP3 expedition in 2005. The expedition focused on deep-sea stations in the Powell Basin and Weddell Sea of Antarctica. Sea stars were collected using trawling methods at depths ranging from 1,047 to 4,931 meters. The dataset includes information on the starfish specimens collected, such as location and depth of collection. A data paper describing the dataset was published in the peer-reviewed open-access journal ZooKeys to make the dataset available and provide scholarly credit to the data publishers.
Tampa BSides - Chef's Tour of Microsoft Security Adoption Framework (SAF)
Antabif on mars
1. ANTABIF: Bruno Danis - MARS workshop
Architecture and Functionalities
Thursday 10 May 12
2. Antarctic Treaty
« In order to promote international
cooperation in scientific investigation in
Antarctica, […],
Scientific observations and results from
Antarctica shall be exchanged and made
freely available. »
Thursday 10 May 12
4. Antarctic Information Networks - scope
Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO David B, Danis B, Griffiths HJ
Thursday 10 May 12
5. Antarctic Information Networks - scope
• Born as Census of Antarctic Marine Life
as the data, visualization and analysis
component
Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO David B, Danis B, Griffiths HJ
Thursday 10 May 12
6. Antarctic Information Networks - scope
• Born as Census of Antarctic Marine Life
as the data, visualization and analysis
component
• Free and open access to biodiversity data
Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO David B, Danis B, Griffiths HJ
Thursday 10 May 12
7. Antarctic Information Networks - scope
• Born as Census of Antarctic Marine Life
as the data, visualization and analysis
component
• Free and open access to biodiversity data
• SCAR-MarBIN and ANTABIF projects
Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO David B, Danis B, Griffiths HJ
Thursday 10 May 12
8. Antarctic Information Networks - scope
• Born as Census of Antarctic Marine Life
as the data, visualization and analysis
component
• Free and open access to biodiversity data
• SCAR-MarBIN and ANTABIF projects
• Science, conservation and management
Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO David B, Danis B, Griffiths HJ
Thursday 10 May 12
9. Antarctic Information Networks - scope
• Born as Census of Antarctic Marine Life
as the data, visualization and analysis
component
• Free and open access to biodiversity data
• SCAR-MarBIN and ANTABIF projects
• Science, conservation and management
• Networked community developments
Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO David B, Danis B, Griffiths HJ
Thursday 10 May 12
10. Antarctic Information Networks - scope
• Born as Census of Antarctic Marine Life
as the data, visualization and analysis
component
• Free and open access to biodiversity data
• SCAR-MarBIN and ANTABIF projects
• Science, conservation and management
• Networked community developments
• SCAR-MarBIN: Citations : 423,
Publications: 58, H-Index: 11
Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO David B, Danis B, Griffiths HJ
Thursday 10 May 12
11. Antarctic Information Networks - scope
• Born as Census of Antarctic Marine Life
as the data, visualization and analysis
component
• Free and open access to biodiversity data
• SCAR-MarBIN and ANTABIF projects
• Science, conservation and management
• Networked community developments
• SCAR-MarBIN: Citations : 423,
Publications: 58, H-Index: 11
Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO David B, Danis B, Griffiths HJ
Thursday 10 May 12
14. Taxonomy
17,098 taxa
The first dynamic Register of Antarctic Marine Species
Taxonomic backbone
Board of 64 editors
Feeds World Register of Marine Species, Catalogue of Life and
Encyclopedia of Life
De Broyer et al, Register of Antarctic Marine Species 2012
Virtually nothing on Bacteria!!
Thursday 10 May 12
15. Taxonomy
17,098 taxa
The first dynamic Register of Antarctic Marine Species
Taxonomic backbone
Board of 64 editors
Feeds World Register of Marine Species, Catalogue of Life and
Encyclopedia of Life
De Broyer et al, Register of Antarctic Marine Species 2012
Virtually nothing on Bacteria!!
Thursday 10 May 12
16. Biogeography
• Single access to 900 datasets
• 2.5 million records
• Data back to 1900 (Pygoscelis
adeliae)
• Spatial data on over 5000 taxa
• Downloadable
• Interoperable
• Free and open
Danis et al, Antarctic Biodiversity Information Facility 2012
• Virtually nothing on Bacteria!!
Thursday 10 May 12
17. Biogeography
• Single access to 900 datasets
• 2.5 million records
• Data back to 1900 (Pygoscelis
adeliae)
• Spatial data on over 5000 taxa
• Downloadable
• Interoperable
• Free and open
Danis et al, Antarctic Biodiversity Information Facility 2012
• Virtually nothing on Bacteria!!
Thursday 10 May 12
19. Antarctic Information Networks - applications
• Data-driven Marine Protected Area designation
Danis et al, The SCAR Antarctic Field Guides 2012
Thursday 10 May 12
20. Antarctic Information Networks - applications
• Data-driven Marine Protected Area designation
• Expedition design
Danis et al, The SCAR Antarctic Field Guides 2012
Thursday 10 May 12
21. Antarctic Information Networks - applications
• Data-driven Marine Protected Area designation
• Expedition design
• Biogeographic patterns
Danis et al, The SCAR Antarctic Field Guides 2012
Thursday 10 May 12
22. Antarctic Information Networks - applications
• Data-driven Marine Protected Area designation
• Expedition design
• Biogeographic patterns
• Antarctic Field Guides
Danis et al, The SCAR Antarctic Field Guides 2012
Thursday 10 May 12
23. Antarctic Information Networks - applications
• Data-driven Marine Protected Area designation
• Expedition design
• Biogeographic patterns
• Antarctic Field Guides
• Biogeographic Atlas
Danis et al, The SCAR Antarctic Field Guides 2012
Thursday 10 May 12
24. Antarctic Information Networks - applications
• Data-driven Marine Protected Area designation
• Expedition design
• Biogeographic patterns
• Antarctic Field Guides
• Biogeographic Atlas
• Gap analysis
Danis et al, The SCAR Antarctic Field Guides 2012
Thursday 10 May 12
53. ipt. biodiversity.aq
• Integrated Publishing Toolkit
• standardize and clean your data
• manage your primary biodiversity data
• manage your associated metadata
• choose your collaborators
• generate and submit a Data Paper
• push data and metadata to Information Systems
Thursday 10 May 12
60. The Data Paper
• A scholarly journal publication whose primary purpose is to
describe a dataset or group of datasets, rather than to
report a research investigation.
• Benefits of the Data Paper
– Scholarly credit to Data Publishers
– Describe the data in structured human readable form
– Bring the existence of the data to the attention of the
scholarly community
Thursday 10 May 12
62. Step-by-Step
• Complete metadata of a dataset using metadata editor in
IPT 2.0.2
• Generate ‘Data Paper’ manuscript (menu: Manage Resource
– RTF Download)
• Submit the manuscript for possible publication in one of the
PenSoft publication (ZooKeys, PhytoKeys, BioRisks,
NeoBiota, Biodiversity Data Journal, Nature Conservation).
• Revision (if any) is carried out using metadata editor in IPT
2.0.2 and manuscript re-submitted to PenSoft Open Journal
System
Thursday 10 May 12
63. Once paper is accepted
• Digital Object Identifier is assigned to the Data Paper
• Paper is published in (a) print format, (b) PDF format, (c)
semantically enhanced HTML, and (d) XML is archived in
PubMedCentral
• DOI of the Data Paper is linked with the Persistent Identifier
of the metadata document in the GBIF Registry
• Data Paper is indexed by Web of Knowledge (ISI),
PubMedCentral, Scopus, Zoological Record, Google
Scholar, CAB Abstracts, Directory of Open Access Journal
(DOAJ), EBSCO.
Thursday 10 May 12
64. Important to consider
• Metadata is complete in all the respect
• All the claims are adequately substantiated
• Data described in ‘Data Paper’ is freely
available at the time of submission of the
manuscript
Thursday 10 May 12
65. This is real
ZooKeys 185: 73–78 (2012)
Antarctic Starfish (Echinodermata: asteroidea) from the ANDEEP3 expedition
doi: 10.3897/zookeys.185.3078 DAtA PAPEr
A peer-reviewed open-access journal
73
www.zookeys.org Launched to accelerate biodiversity research
Antarctic Starfish (Echinodermata, Asteroidea) from
the ANDEEP3 expedition
Impact Factor: 0.514 Bruno Danis1, Michel Jangoux2, Jennifer Wilmes2
1 ANTABIF, 29, rue Vautier, 1000, Brussels, Belgium 2 Université Libre de Bruxelles, 50, av FD Roosevelt,
1050, Brussels, Belgium
Corresponding author: Bruno Danis (bruno.danis@gmail.com)
Academic editor: Vishwas Chavan | Received 13 March 2012 | Accepted 18 April 2012 | Published 23 April 2012
Citation: Danis B, Jangoux M, Wilmes J (2012) Antarctic Starfish (Echinodermata: asteroidea) from the ANDEEP3
expedition. ZooKeys 185: 73–78. doi: 10.3897/zookeys.185.3078
Abstract
This dataset includes information on sea stars collected during the ANDEEP3 expedition, which took
place in 2005. The expedition focused on deep-sea stations in the Powell Basin and Weddell Sea.
Sea stars were collected using an Agassiz trawl (3m, mesh-size 500µm), deployed in 16 stations
during the ANTXXII/3 (ANDEEP3, PS72) expedition of the RV Polarstern. Sampling depth ranged
from 1047 to 4931m. Trawling distance ranged from 731 to 3841m. The sampling area ranges from
-41°S to -71°S (latitude) and from 0 to -65°W (longitude). A complete list of stations is available from
the PANGAEA data system (http://www.pangaea.de/PHP/CruiseReports.php?b=Polarstern), including a
cruise report (http://epic-reports.awi.de/3694/1/PE_72.pdf ).
The dataset includes 50 records, with individual counts ranging from 1-10, reaching a total of 132
specimens.
The andeep3-Asteroidea is a unique dataset as it covers an under-explored region of the Southern
Ocean, and that very little information was available regarding Antarctic deep-sea starfish. Before this
study, most of the information available focused on starfish from shallower depths than 1000m. This
dataset allowed to make unique observations, such as the fact that some species were only present at
very high depths (Hymenaster crucifer, Hymenaster pellucidus, Hymenaster praecoquis, Psilaster charcoti,
Freyella attenuata, Freyastera tuberculata, Styrachaster chuni and Vemaster sudatlanticus were all found below
-3770m), while others displayed remarkable eurybathy, with very high depths amplitudes (Bathybiaster
loripes (4842m), Lysasterias adeliae (4832m), Lophaster stellans (4752m), Cheiraster planeta (4708m), Er-
emicaster crassus (4626m), Lophaster gaini (4560m) and Ctenodiscus australis (4489m)).
Even if the number of records is relatively small, the data bring many new insights on the taxonomic,
bathymetric and geographic distributions of Southern starfish, covering a very large sampling zone. The
dataset also brings to light six species, newly reported in the Southern Ocean.
The quality of the data was controlled very thoroughly, by means of on-board Polarstern GPS sys-
tems, checking of identification by a renowned specialist (Prof. Michel Jangoux, Université Libre de Brux-
Copyright Bruno Danis et al. This is an open access article distributed under the terms of the Creative Commons Attribution License 3.0 (CC-
BY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Thursday 10 May 12
66. This is real
ZooKeys 185: 73–78 (2012)
Antarctic Starfish (Echinodermata: asteroidea) from the ANDEEP3 expedition
doi: 10.3897/zookeys.185.3078 DAtA PAPEr
A peer-reviewed open-access journal
73
www.zookeys.org Launched to accelerate biodiversity research
Antarctic Starfish (Echinodermata, Asteroidea) from
the ANDEEP3 expedition
Impact Factor: 0.514 Bruno Danis1, Michel Jangoux2, Jennifer Wilmes2
1 ANTABIF, 29, rue Vautier, 1000, Brussels, Belgium 2 Université Libre de Bruxelles, 50, av FD Roosevelt,
1050, Brussels, Belgium
Corresponding author: Bruno Danis (bruno.danis@gmail.com)
Academic editor: Vishwas Chavan | Received 13 March 2012 | Accepted 18 April 2012 | Published 23 April 2012
Citation: Danis B, Jangoux M, Wilmes J (2012) Antarctic Starfish (Echinodermata: asteroidea) from the ANDEEP3
expedition. ZooKeys 185: 73–78. doi: 10.3897/zookeys.185.3078
Abstract
This dataset includes information on sea stars collected during the ANDEEP3 expedition, which took
place in 2005. The expedition focused on deep-sea stations in the Powell Basin and Weddell Sea.
Sea stars were collected using an Agassiz trawl (3m, mesh-size 500µm), deployed in 16 stations
during the ANTXXII/3 (ANDEEP3, PS72) expedition of the RV Polarstern. Sampling depth ranged
from 1047 to 4931m. Trawling distance ranged from 731 to 3841m. The sampling area ranges from
-41°S to -71°S (latitude) and from 0 to -65°W (longitude). A complete list of stations is available from
the PANGAEA data system (http://www.pangaea.de/PHP/CruiseReports.php?b=Polarstern), including a
cruise report (http://epic-reports.awi.de/3694/1/PE_72.pdf ).
The dataset includes 50 records, with individual counts ranging from 1-10, reaching a total of 132
specimens.
The andeep3-Asteroidea is a unique dataset as it covers an under-explored region of the Southern
Ocean, and that very little information was available regarding Antarctic deep-sea starfish. Before this
study, most of the information available focused on starfish from shallower depths than 1000m. This
dataset allowed to make unique observations, such as the fact that some species were only present at
very high depths (Hymenaster crucifer, Hymenaster pellucidus, Hymenaster praecoquis, Psilaster charcoti,
Freyella attenuata, Freyastera tuberculata, Styrachaster chuni and Vemaster sudatlanticus were all found below
-3770m), while others displayed remarkable eurybathy, with very high depths amplitudes (Bathybiaster
loripes (4842m), Lysasterias adeliae (4832m), Lophaster stellans (4752m), Cheiraster planeta (4708m), Er-
emicaster crassus (4626m), Lophaster gaini (4560m) and Ctenodiscus australis (4489m)).
Even if the number of records is relatively small, the data bring many new insights on the taxonomic,
bathymetric and geographic distributions of Southern starfish, covering a very large sampling zone. The
dataset also brings to light six species, newly reported in the Southern Ocean.
The quality of the data was controlled very thoroughly, by means of on-board Polarstern GPS sys-
tems, checking of identification by a renowned specialist (Prof. Michel Jangoux, Université Libre de Brux-
Copyright Bruno Danis et al. This is an open access article distributed under the terms of the Creative Commons Attribution License 3.0 (CC-
BY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Thursday 10 May 12
67. This is real
ZooKeys 185: 73–78 (2012)
Antarctic Starfish (Echinodermata: asteroidea) from the ANDEEP3 expedition
doi: 10.3897/zookeys.185.3078 DAtA PAPEr
A peer-reviewed open-access journal
73
www.zookeys.org Launched to accelerate biodiversity research
Antarctic Starfish (Echinodermata, Asteroidea) from
the ANDEEP3 expedition
Impact Factor: 0.514 Bruno Danis1, Michel Jangoux2, Jennifer Wilmes2
1 ANTABIF, 29, rue Vautier, 1000, Brussels, Belgium 2 Université Libre de Bruxelles, 50, av FD Roosevelt,
1050, Brussels, Belgium
Corresponding author: Bruno Danis (bruno.danis@gmail.com)
Academic editor: Vishwas Chavan | Received 13 March 2012 | Accepted 18 April 2012 | Published 23 April 2012
Citation: Danis B, Jangoux M, Wilmes J (2012) Antarctic Starfish (Echinodermata: asteroidea) from the ANDEEP3
expedition. ZooKeys 185: 73–78. doi: 10.3897/zookeys.185.3078
Abstract
This dataset includes information on sea stars collected during the ANDEEP3 expedition, which took
place in 2005. The expedition focused on deep-sea stations in the Powell Basin and Weddell Sea.
Sea stars were collected using an Agassiz trawl (3m, mesh-size 500µm), deployed in 16 stations
during the ANTXXII/3 (ANDEEP3, PS72) expedition of the RV Polarstern. Sampling depth ranged
from 1047 to 4931m. Trawling distance ranged from 731 to 3841m. The sampling area ranges from
-41°S to -71°S (latitude) and from 0 to -65°W (longitude). A complete list of stations is available from
the PANGAEA data system (http://www.pangaea.de/PHP/CruiseReports.php?b=Polarstern), including a
cruise report (http://epic-reports.awi.de/3694/1/PE_72.pdf ).
The dataset includes 50 records, with individual counts ranging from 1-10, reaching a total of 132
specimens.
The andeep3-Asteroidea is a unique dataset as it covers an under-explored region of the Southern
Ocean, and that very little information was available regarding Antarctic deep-sea starfish. Before this
study, most of the information available focused on starfish from shallower depths than 1000m. This
dataset allowed to make unique observations, such as the fact that some species were only present at
very high depths (Hymenaster crucifer, Hymenaster pellucidus, Hymenaster praecoquis, Psilaster charcoti,
Freyella attenuata, Freyastera tuberculata, Styrachaster chuni and Vemaster sudatlanticus were all found below
-3770m), while others displayed remarkable eurybathy, with very high depths amplitudes (Bathybiaster
loripes (4842m), Lysasterias adeliae (4832m), Lophaster stellans (4752m), Cheiraster planeta (4708m), Er-
emicaster crassus (4626m), Lophaster gaini (4560m) and Ctenodiscus australis (4489m)).
Even if the number of records is relatively small, the data bring many new insights on the taxonomic,
bathymetric and geographic distributions of Southern starfish, covering a very large sampling zone. The
dataset also brings to light six species, newly reported in the Southern Ocean.
The quality of the data was controlled very thoroughly, by means of on-board Polarstern GPS sys-
tems, checking of identification by a renowned specialist (Prof. Michel Jangoux, Université Libre de Brux-
Copyright Bruno Danis et al. This is an open access article distributed under the terms of the Creative Commons Attribution License 3.0 (CC-
BY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Thursday 10 May 12
68. afg. biodiversity.aq
• Identification aid
• Publication/sharing platform for
customized Field Guides
• High quality (useful) pictures
• Expert Descriptions
• Built dynamically from various sources
• Generate a pdf for your taxa/area of
interest, and share
Thursday 10 May 12
79. atlas. biodiversity.aq
• Dynamic approach to a Biogeographic Atlas
• Collaborative project: 70+ specialists involved
Thursday 10 May 12
80. atlas. biodiversity.aq
• Dynamic approach to a Biogeographic Atlas
• Collaborative project: 70+ specialists involved
• interdisciplinary: taxonomy, oceanography, ecology,
phylogeography, modelization, data management, GIS,
conservationists
Thursday 10 May 12
81. atlas. biodiversity.aq
• Dynamic approach to a Biogeographic Atlas
• Collaborative project: 70+ specialists involved
• interdisciplinary: taxonomy, oceanography, ecology,
phylogeography, modelization, data management, GIS,
conservationists
• Modelization workshop coming up
Thursday 10 May 12
82. Available data layers Slope
Bathymetry
Chlorophyll
Distance to the continent
Distance to bird colonies
Distance to ice
Distance to shelf
Distance to canyon
Floor temperature
+
ANTABIF Occurrence
records
Thursday 10 May 12
83. Available data layers Slope
Bathymetry
Chlorophyll
Distance to the continent
Distance to bird colonies
Distance to ice
Distance to shelf
Distance to canyon
Floor temperature
+
ANTABIF Occurrence
records
Thursday 10 May 12
86. Community
• Get the Community involved in data
management
• Enhance interoperability
• Optimize research efforts/resources
• Towards integrative, connected science
through Open Access
Thursday 10 May 12
87. Challenges
• Data deluge
• Digital divides
• Missing data types
• Orphan datasets
• Cultural change
Thursday 10 May 12