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FOSS4G          (GRASS        R    GMT)



                           Takayuki NUIMURA




                              11th Dec. 2011




Takayuki NUIMURA (   )   FOSS4G                       11th Dec. 2011   1 / 15
Outline

 1




 2


         Step 1:     GDAL   DEM
         Step 2:     GRASS    GPS                   DEM
         Step 3:     Octave  RS-DEM
         Step 4:     R   RS-DEMs

 3

         R                              (       )
         GMT                        (       )



Takayuki NUIMURA (         )   FOSS4G                     11th Dec. 2011   2 / 15
FOSS4G                             FLOSS1


                              FLOSS



                              FOSS4G

                           データ処理&図化
                          (GDAL, GRASS, R, Octave)



                           空間データ図化
                                   (GMT)



                                    グラフィック処理
                                      (Inkscape, GIMP)


                                   プレゼンテーション
                                       (LaTeX Beamer)            Beamer


    1
        Free/Libre and Open Source Software
Takayuki NUIMURA (             )      FOSS4G                              11th Dec. 2011   3 / 15
(ex. AX010        )




                                  =⇒




Takayuki NUIMURA (        )   FOSS4G       11th Dec. 2011   4 / 15
N
                                                                                                    Everest
                                                                   28˚00'
                                                      [m]
    30˚                                 China               8000
                                                            7000
                       Ne                                          27˚50'
                         pa         Khumbu Himal            6000
                              l                             5000
                                                            4000
                             Kathmandu                      3000
                                                                   27˚40'
                                                            2000
                                                            1000
   25˚               India                                    0                                         10 km
                                                                   27˚30'
             80˚                                    90˚                         86˚30' 86˚40' 86˚50' 87˚00'
                                  85˚




Takayuki NUIMURA (                  )      FOSS4G                                            11th Dec. 2011     5 / 15
2007                                 (                                      )




                                                                              N



28˚00'
                                                          Everest                                             DEM
                                                                          [ m a.s.l ]                         GPS
                                                                                 6000
                                                                                         (      3800 – 5500 m a.s.l.)
                                                                                  5000

                                                                                  4000
27˚50'         Base station
               Peak                                               China
                                                                                         (Nuimura et al., J. Glaciol., in revise)
                                                         Ne
                                                            p
                                                                                  3000
                                                             al
                  km
           0      5    10                               India


         86˚30'               86˚40'       86˚50'                   87˚00'




  Takayuki NUIMURA (                                )             FOSS4G                                                     11th Dec. 2011   6 / 15
1   GDAL         DEM             HDF=⇒GeoTIFF
    2   GRASS         GPS                       =⇒GeoTIFF
    3   Octave RS-DEMs (1992–2008)         GPS-DEM

    4   R                   RS-DEMs                           (m a−1 :
        1992–2008)




Takayuki NUIMURA (           )   FOSS4G                     11th Dec. 2011   7 / 15
Step 1: GDAL              DEM


 GDAL                HDF2 =⇒GeoTIFF

 gdal_translate                             (sds                          )
 #           EHdr (                                )
 gdal_translate -sds -of “EHdr”         HDF                        Ehdr

 #                                                           GeoTIFF
 gdal_translate -of “Gtiff”   Ehdr                             GeoTIFF

         gdal_translate
         (                              )




    2
        ERSDAC                ASTER                    HDF
Takayuki NUIMURA (        )    FOSS4G                                         11th Dec. 2011   8 / 15
Step 2: GRASS                     GPS                          DEM

 GRASS GIS           v.surf.rst
    1   v.in.ogr                            GRASS
    2   v.surf.rst                                   =⇒
    3   r.out.gdal                           GRASS        GeoTIFF




Takayuki NUIMURA (           )     FOSS4G                            11th Dec. 2011   9 / 15
Step 3: Octave       RS-DEM

                         Octave             RS-DEMs        GPS-DEM




                                  Step 1:




                                  Step 2:




Takayuki NUIMURA (   )   FOSS4G                       11th Dec. 2011   10 / 15
Step 4: R               RS-DEMs



 R       rgdal
 rgdal                                     GIS
        readOGR
        readGDAL
        writeOGR
        writeGDAL

                     readGDAL    GeoTIFF         DEM
                     writeGDAL   GeoTIFF




Takayuki NUIMURA (           )   FOSS4G                11th Dec. 2011   11 / 15
Step 4: R            RS-DEMs




                                     1992–2008                         DEM
                                     (         )




                                     =⇒
                                                   (   or         )




Takayuki NUIMURA (      )   FOSS4G                          11th Dec. 2011   12 / 15
Step 4: R             RS-DEMs


    1   readGDAL          1992–2008    DEM   R
    2   lm           lm                             (m a−1 )
    3   writeGDAL                                GeoTIFF




Takayuki NUIMURA (        )   FOSS4G               11th Dec. 2011   13 / 15
R                                                                              (                          )
 DEM




                                     7000
                                     6500
                                     6000
                     Elevation (m)
                                     5500
                                     5000
                                     4500




                                                                        Debris−free                           Debris−free
                                                     a)                                        b)
                                     4000




                                                                        Debris−covered                        Debris−covered

                                                −3        −2   −1   0      1       2   3   0        5       10       15        20

                                                      Elevation change (m a−1)                          Area (km2)




        50 m                                                                                                         (m a−1 )
        R   plotCI
Takayuki NUIMURA (                          )              FOSS4G                                                                   11th Dec. 2011   14 / 15
GMT                                       (   )




 GDAL                GeoTIFF=⇒NetCDF3             GMT
                                                           4
 grdmath             NoDATA
    3
        GMT
    4

Takayuki NUIMURA (           )   FOSS4G                 11th Dec. 2011   15 / 15

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111211 foss4g nagoya_presentation2

  • 1. FOSS4G (GRASS R GMT) Takayuki NUIMURA 11th Dec. 2011 Takayuki NUIMURA ( ) FOSS4G 11th Dec. 2011 1 / 15
  • 2. Outline 1 2 Step 1: GDAL DEM Step 2: GRASS GPS DEM Step 3: Octave RS-DEM Step 4: R RS-DEMs 3 R ( ) GMT ( ) Takayuki NUIMURA ( ) FOSS4G 11th Dec. 2011 2 / 15
  • 3. FOSS4G FLOSS1 FLOSS FOSS4G データ処理&図化 (GDAL, GRASS, R, Octave) 空間データ図化 (GMT) グラフィック処理 (Inkscape, GIMP) プレゼンテーション (LaTeX Beamer) Beamer 1 Free/Libre and Open Source Software Takayuki NUIMURA ( ) FOSS4G 11th Dec. 2011 3 / 15
  • 4. (ex. AX010 ) =⇒ Takayuki NUIMURA ( ) FOSS4G 11th Dec. 2011 4 / 15
  • 5. N Everest 28˚00' [m] 30˚ China 8000 7000 Ne 27˚50' pa Khumbu Himal 6000 l 5000 4000 Kathmandu 3000 27˚40' 2000 1000 25˚ India 0 10 km 27˚30' 80˚ 90˚ 86˚30' 86˚40' 86˚50' 87˚00' 85˚ Takayuki NUIMURA ( ) FOSS4G 11th Dec. 2011 5 / 15
  • 6. 2007 ( ) N 28˚00' Everest DEM [ m a.s.l ] GPS 6000 ( 3800 – 5500 m a.s.l.) 5000 4000 27˚50' Base station Peak China (Nuimura et al., J. Glaciol., in revise) Ne p 3000 al km 0 5 10 India 86˚30' 86˚40' 86˚50' 87˚00' Takayuki NUIMURA ( ) FOSS4G 11th Dec. 2011 6 / 15
  • 7. 1 GDAL DEM HDF=⇒GeoTIFF 2 GRASS GPS =⇒GeoTIFF 3 Octave RS-DEMs (1992–2008) GPS-DEM 4 R RS-DEMs (m a−1 : 1992–2008) Takayuki NUIMURA ( ) FOSS4G 11th Dec. 2011 7 / 15
  • 8. Step 1: GDAL DEM GDAL HDF2 =⇒GeoTIFF gdal_translate (sds ) # EHdr ( ) gdal_translate -sds -of “EHdr” HDF Ehdr # GeoTIFF gdal_translate -of “Gtiff” Ehdr GeoTIFF gdal_translate ( ) 2 ERSDAC ASTER HDF Takayuki NUIMURA ( ) FOSS4G 11th Dec. 2011 8 / 15
  • 9. Step 2: GRASS GPS DEM GRASS GIS v.surf.rst 1 v.in.ogr GRASS 2 v.surf.rst =⇒ 3 r.out.gdal GRASS GeoTIFF Takayuki NUIMURA ( ) FOSS4G 11th Dec. 2011 9 / 15
  • 10. Step 3: Octave RS-DEM Octave RS-DEMs GPS-DEM Step 1: Step 2: Takayuki NUIMURA ( ) FOSS4G 11th Dec. 2011 10 / 15
  • 11. Step 4: R RS-DEMs R rgdal rgdal GIS readOGR readGDAL writeOGR writeGDAL readGDAL GeoTIFF DEM writeGDAL GeoTIFF Takayuki NUIMURA ( ) FOSS4G 11th Dec. 2011 11 / 15
  • 12. Step 4: R RS-DEMs 1992–2008 DEM ( ) =⇒ ( or ) Takayuki NUIMURA ( ) FOSS4G 11th Dec. 2011 12 / 15
  • 13. Step 4: R RS-DEMs 1 readGDAL 1992–2008 DEM R 2 lm lm (m a−1 ) 3 writeGDAL GeoTIFF Takayuki NUIMURA ( ) FOSS4G 11th Dec. 2011 13 / 15
  • 14. R ( ) DEM 7000 6500 6000 Elevation (m) 5500 5000 4500 Debris−free Debris−free a) b) 4000 Debris−covered Debris−covered −3 −2 −1 0 1 2 3 0 5 10 15 20 Elevation change (m a−1) Area (km2) 50 m (m a−1 ) R plotCI Takayuki NUIMURA ( ) FOSS4G 11th Dec. 2011 14 / 15
  • 15. GMT ( ) GDAL GeoTIFF=⇒NetCDF3 GMT 4 grdmath NoDATA 3 GMT 4 Takayuki NUIMURA ( ) FOSS4G 11th Dec. 2011 15 / 15