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Clinician Decision Support Dashboard:
  Extracting value from Electronic
   Medical Records using Text Mining
        Iccha Sethi and Harold R. Garner
   (isethi@vbi.vt.edu and garner@vbi.vt.edu)
           Virginia Bioinformatics Institute, Virginia Tech
Objective
• To leverage EMRs to enhance patient care.
• To realize a system that will analyze a patient’s
  evolving EMR:
  • in context with all available biomedical knowledge.
  • using the accumulated experience recorded in the EMRs of other
    patients.
  • with the help of interactive, automated, actionable text mining
    tools.
  • using multidisciplinary approach.                 Computer
                                                                  Science
                                                                • Text Mining
                                               Marketing        • HCI




                                                           Medicine
                                                           • Biomedical
                                                              research




                                       Clinician Decision Support Dashboard
Flow Chart of the CDS Dashboard
 The CDS Dashboard, in a secure network, will help physicians find de-identified
 electronic medical records similar to their patient's medical record, relevant
 medical literature, recent research findings, and clinical trials thereby aiding
 them in diagnosis, treatment, prognosis and outcomes.


                      Patient EMR                           Clinician Input

  INPUT

                                Query Assembly and Conditioning


 SIMILARITY
                                            eTBlast
 ENGINE



                               De-
OUTPUT         Related                     Case       Clinical       Customized
                            identified
              Literature                  Reports      Trials         Features
                              EMRs

Figure 1: Flow chart of CDS (The Patient EMR is processed by the CDS and then compared
to various databases by eTBlast)
Challenges
Several challenges exist in creating a CDS Dashboard that can be universally used
including:

      Variation in entries in the EMRs; each doctor uses their own set of acronyms and shortcuts.


         The presence of billing and CPT codes.


         Combinations of unstructured and structured laboratory data.


      Presence of lexical variants and synonyms.
Goals
Our goal in building the CDS Dashboard was the ensure :



                                platform
                                              portability
                             independence



                                             can layer on
                                            top of existing
                                              electronic
                              modularity
                                            medical record
                                             management
                                               software




Discussion
• The tool can be used in multiple ways:
   • Teaching aid for medical students
   • Exploratory tool for doctors and nurses

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Clinician Decision Support Dashboard

  • 1. Clinician Decision Support Dashboard: Extracting value from Electronic Medical Records using Text Mining Iccha Sethi and Harold R. Garner (isethi@vbi.vt.edu and garner@vbi.vt.edu) Virginia Bioinformatics Institute, Virginia Tech
  • 2. Objective • To leverage EMRs to enhance patient care. • To realize a system that will analyze a patient’s evolving EMR: • in context with all available biomedical knowledge. • using the accumulated experience recorded in the EMRs of other patients. • with the help of interactive, automated, actionable text mining tools. • using multidisciplinary approach. Computer Science • Text Mining Marketing • HCI Medicine • Biomedical research Clinician Decision Support Dashboard
  • 3. Flow Chart of the CDS Dashboard The CDS Dashboard, in a secure network, will help physicians find de-identified electronic medical records similar to their patient's medical record, relevant medical literature, recent research findings, and clinical trials thereby aiding them in diagnosis, treatment, prognosis and outcomes. Patient EMR Clinician Input INPUT Query Assembly and Conditioning SIMILARITY eTBlast ENGINE De- OUTPUT Related Case Clinical Customized identified Literature Reports Trials Features EMRs Figure 1: Flow chart of CDS (The Patient EMR is processed by the CDS and then compared to various databases by eTBlast)
  • 4. Challenges Several challenges exist in creating a CDS Dashboard that can be universally used including: Variation in entries in the EMRs; each doctor uses their own set of acronyms and shortcuts. The presence of billing and CPT codes. Combinations of unstructured and structured laboratory data. Presence of lexical variants and synonyms.
  • 5. Goals Our goal in building the CDS Dashboard was the ensure : platform portability independence can layer on top of existing electronic modularity medical record management software Discussion • The tool can be used in multiple ways: • Teaching aid for medical students • Exploratory tool for doctors and nurses