Submit Search
Upload
A novel method for time-binning rates of continuous character evolution on a phylogeny
•
Download as PPTX, PDF
•
1 like
•
911 views
Graeme Lloyd
Follow
Education
Report
Share
Report
Share
1 of 32
Download now
Recommended
GSA 2016 Talk: Inferring Ancestor-Descendant Relationships in the Fossil Reco...
GSA 2016 Talk: Inferring Ancestor-Descendant Relationships in the Fossil Reco...
David Bapst
Evolution 2013 Talk: The Impact of Time-Scaling Methons on Phylogenetic Compa...
Evolution 2013 Talk: The Impact of Time-Scaling Methons on Phylogenetic Compa...
David Bapst
A new approach to visualizing the topology space of all possible phylogenetic...
A new approach to visualizing the topology space of all possible phylogenetic...
Graeme Lloyd
A novel metatree approach to generating large phylogenetic hypotheses of exti...
A novel metatree approach to generating large phylogenetic hypotheses of exti...
Graeme Lloyd
Measuring morphological diversity and tempo using discrete characters: advant...
Measuring morphological diversity and tempo using discrete characters: advant...
Graeme Lloyd
Phylogenetic diversity through deep time: an exploration using Mesozoic dinos...
Phylogenetic diversity through deep time: an exploration using Mesozoic dinos...
Graeme Lloyd
Time-binning rates of continuous character evolution on a phylogeny: the orig...
Time-binning rates of continuous character evolution on a phylogeny: the orig...
Graeme Lloyd
Detecting phylogenetic signals of endemism and dispersal: the effects of Pang...
Detecting phylogenetic signals of endemism and dispersal: the effects of Pang...
Graeme Lloyd
Recommended
GSA 2016 Talk: Inferring Ancestor-Descendant Relationships in the Fossil Reco...
GSA 2016 Talk: Inferring Ancestor-Descendant Relationships in the Fossil Reco...
David Bapst
Evolution 2013 Talk: The Impact of Time-Scaling Methons on Phylogenetic Compa...
Evolution 2013 Talk: The Impact of Time-Scaling Methons on Phylogenetic Compa...
David Bapst
A new approach to visualizing the topology space of all possible phylogenetic...
A new approach to visualizing the topology space of all possible phylogenetic...
Graeme Lloyd
A novel metatree approach to generating large phylogenetic hypotheses of exti...
A novel metatree approach to generating large phylogenetic hypotheses of exti...
Graeme Lloyd
Measuring morphological diversity and tempo using discrete characters: advant...
Measuring morphological diversity and tempo using discrete characters: advant...
Graeme Lloyd
Phylogenetic diversity through deep time: an exploration using Mesozoic dinos...
Phylogenetic diversity through deep time: an exploration using Mesozoic dinos...
Graeme Lloyd
Time-binning rates of continuous character evolution on a phylogeny: the orig...
Time-binning rates of continuous character evolution on a phylogeny: the orig...
Graeme Lloyd
Detecting phylogenetic signals of endemism and dispersal: the effects of Pang...
Detecting phylogenetic signals of endemism and dispersal: the effects of Pang...
Graeme Lloyd
Generating new models for detecting phylogenetic signals of endemism and disp...
Generating new models for detecting phylogenetic signals of endemism and disp...
Graeme Lloyd
Automated generation of large phylogenies and a probabilistically time-scaled...
Automated generation of large phylogenies and a probabilistically time-scaled...
Graeme Lloyd
New methodologies for the use of cladistic-type matrices to measure morpholog...
New methodologies for the use of cladistic-type matrices to measure morpholog...
Graeme Lloyd
A probabilistically time-scaled 1,000-taxon phylogenetic hypothesis for Mesoz...
A probabilistically time-scaled 1,000-taxon phylogenetic hypothesis for Mesoz...
Graeme Lloyd
How does Evolutionary Distinctiveness change when we place fossils in the tree?
How does Evolutionary Distinctiveness change when we place fossils in the tree?
Graeme Lloyd
A new R package for automating cladistic ordination and the effects of phylog...
A new R package for automating cladistic ordination and the effects of phylog...
Graeme Lloyd
Claddis: a new R package for automating disparity analyses based on cladistic...
Claddis: a new R package for automating disparity analyses based on cladistic...
Graeme Lloyd
Beyond the lower-bound: the fossil record can provide empirically-informed pr...
Beyond the lower-bound: the fossil record can provide empirically-informed pr...
Graeme Lloyd
Geological controls on palaeobiodiversity: beyond the marine macrofossil record
Geological controls on palaeobiodiversity: beyond the marine macrofossil record
Graeme Lloyd
Are our estimates of palaeobiodiversity more apparent than real?
Are our estimates of palaeobiodiversity more apparent than real?
Graeme Lloyd
Are palaeobiodiversity patterns more apparent than real?
Are palaeobiodiversity patterns more apparent than real?
Graeme Lloyd
What the deep sea tells us about sampling biases in the fossil record
What the deep sea tells us about sampling biases in the fossil record
Graeme Lloyd
Is there a bias in deep sea diversity patterns?
Is there a bias in deep sea diversity patterns?
Graeme Lloyd
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Graeme Lloyd
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Graeme Lloyd
A new non-minimal algorithm for dating phylogenies of fossil taxa
A new non-minimal algorithm for dating phylogenies of fossil taxa
Graeme Lloyd
Confidence intervals on node age estimates in vertebrate phylogeny
Confidence intervals on node age estimates in vertebrate phylogeny
Graeme Lloyd
Effects of ancestral character estimation on methods for estimating rates of ...
Effects of ancestral character estimation on methods for estimating rates of ...
Graeme Lloyd
Bias in estimates of palaeobiodiversity: beyond the marine macrofossil record
Bias in estimates of palaeobiodiversity: beyond the marine macrofossil record
Graeme Lloyd
400-million years of 'fishes': a survey of sampling biases based on the UK re...
400-million years of 'fishes': a survey of sampling biases based on the UK re...
Graeme Lloyd
Sanyam Choudhary Chemistry practical.pdf
Sanyam Choudhary Chemistry practical.pdf
sanyamsingh5019
Código Creativo y Arte de Software | Unidad 1
Código Creativo y Arte de Software | Unidad 1
Maestría en Comunicación Digital Interactiva - UNR
More Related Content
More from Graeme Lloyd
Generating new models for detecting phylogenetic signals of endemism and disp...
Generating new models for detecting phylogenetic signals of endemism and disp...
Graeme Lloyd
Automated generation of large phylogenies and a probabilistically time-scaled...
Automated generation of large phylogenies and a probabilistically time-scaled...
Graeme Lloyd
New methodologies for the use of cladistic-type matrices to measure morpholog...
New methodologies for the use of cladistic-type matrices to measure morpholog...
Graeme Lloyd
A probabilistically time-scaled 1,000-taxon phylogenetic hypothesis for Mesoz...
A probabilistically time-scaled 1,000-taxon phylogenetic hypothesis for Mesoz...
Graeme Lloyd
How does Evolutionary Distinctiveness change when we place fossils in the tree?
How does Evolutionary Distinctiveness change when we place fossils in the tree?
Graeme Lloyd
A new R package for automating cladistic ordination and the effects of phylog...
A new R package for automating cladistic ordination and the effects of phylog...
Graeme Lloyd
Claddis: a new R package for automating disparity analyses based on cladistic...
Claddis: a new R package for automating disparity analyses based on cladistic...
Graeme Lloyd
Beyond the lower-bound: the fossil record can provide empirically-informed pr...
Beyond the lower-bound: the fossil record can provide empirically-informed pr...
Graeme Lloyd
Geological controls on palaeobiodiversity: beyond the marine macrofossil record
Geological controls on palaeobiodiversity: beyond the marine macrofossil record
Graeme Lloyd
Are our estimates of palaeobiodiversity more apparent than real?
Are our estimates of palaeobiodiversity more apparent than real?
Graeme Lloyd
Are palaeobiodiversity patterns more apparent than real?
Are palaeobiodiversity patterns more apparent than real?
Graeme Lloyd
What the deep sea tells us about sampling biases in the fossil record
What the deep sea tells us about sampling biases in the fossil record
Graeme Lloyd
Is there a bias in deep sea diversity patterns?
Is there a bias in deep sea diversity patterns?
Graeme Lloyd
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Graeme Lloyd
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Graeme Lloyd
A new non-minimal algorithm for dating phylogenies of fossil taxa
A new non-minimal algorithm for dating phylogenies of fossil taxa
Graeme Lloyd
Confidence intervals on node age estimates in vertebrate phylogeny
Confidence intervals on node age estimates in vertebrate phylogeny
Graeme Lloyd
Effects of ancestral character estimation on methods for estimating rates of ...
Effects of ancestral character estimation on methods for estimating rates of ...
Graeme Lloyd
Bias in estimates of palaeobiodiversity: beyond the marine macrofossil record
Bias in estimates of palaeobiodiversity: beyond the marine macrofossil record
Graeme Lloyd
400-million years of 'fishes': a survey of sampling biases based on the UK re...
400-million years of 'fishes': a survey of sampling biases based on the UK re...
Graeme Lloyd
More from Graeme Lloyd
(20)
Generating new models for detecting phylogenetic signals of endemism and disp...
Generating new models for detecting phylogenetic signals of endemism and disp...
Automated generation of large phylogenies and a probabilistically time-scaled...
Automated generation of large phylogenies and a probabilistically time-scaled...
New methodologies for the use of cladistic-type matrices to measure morpholog...
New methodologies for the use of cladistic-type matrices to measure morpholog...
A probabilistically time-scaled 1,000-taxon phylogenetic hypothesis for Mesoz...
A probabilistically time-scaled 1,000-taxon phylogenetic hypothesis for Mesoz...
How does Evolutionary Distinctiveness change when we place fossils in the tree?
How does Evolutionary Distinctiveness change when we place fossils in the tree?
A new R package for automating cladistic ordination and the effects of phylog...
A new R package for automating cladistic ordination and the effects of phylog...
Claddis: a new R package for automating disparity analyses based on cladistic...
Claddis: a new R package for automating disparity analyses based on cladistic...
Beyond the lower-bound: the fossil record can provide empirically-informed pr...
Beyond the lower-bound: the fossil record can provide empirically-informed pr...
Geological controls on palaeobiodiversity: beyond the marine macrofossil record
Geological controls on palaeobiodiversity: beyond the marine macrofossil record
Are our estimates of palaeobiodiversity more apparent than real?
Are our estimates of palaeobiodiversity more apparent than real?
Are palaeobiodiversity patterns more apparent than real?
Are palaeobiodiversity patterns more apparent than real?
What the deep sea tells us about sampling biases in the fossil record
What the deep sea tells us about sampling biases in the fossil record
Is there a bias in deep sea diversity patterns?
Is there a bias in deep sea diversity patterns?
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Adventures in protein world reveal the Tree of Life and the evolution of comp...
Adventures in protein world reveal the Tree of Life and the evolution of comp...
A new non-minimal algorithm for dating phylogenies of fossil taxa
A new non-minimal algorithm for dating phylogenies of fossil taxa
Confidence intervals on node age estimates in vertebrate phylogeny
Confidence intervals on node age estimates in vertebrate phylogeny
Effects of ancestral character estimation on methods for estimating rates of ...
Effects of ancestral character estimation on methods for estimating rates of ...
Bias in estimates of palaeobiodiversity: beyond the marine macrofossil record
Bias in estimates of palaeobiodiversity: beyond the marine macrofossil record
400-million years of 'fishes': a survey of sampling biases based on the UK re...
400-million years of 'fishes': a survey of sampling biases based on the UK re...
Recently uploaded
Sanyam Choudhary Chemistry practical.pdf
Sanyam Choudhary Chemistry practical.pdf
sanyamsingh5019
Código Creativo y Arte de Software | Unidad 1
Código Creativo y Arte de Software | Unidad 1
Maestría en Comunicación Digital Interactiva - UNR
Model Call Girl in Tilak Nagar Delhi reach out to us at 🔝9953056974🔝
Model Call Girl in Tilak Nagar Delhi reach out to us at 🔝9953056974🔝
9953056974 Low Rate Call Girls In Saket, Delhi NCR
18-04-UA_REPORT_MEDIALITERAСY_INDEX-DM_23-1-final-eng.pdf
18-04-UA_REPORT_MEDIALITERAСY_INDEX-DM_23-1-final-eng.pdf
ssuser54595a
URLs and Routing in the Odoo 17 Website App
URLs and Routing in the Odoo 17 Website App
Celine George
Separation of Lanthanides/ Lanthanides and Actinides
Separation of Lanthanides/ Lanthanides and Actinides
FatimaKhan178732
Kisan Call Centre - To harness potential of ICT in Agriculture by answer farm...
Kisan Call Centre - To harness potential of ICT in Agriculture by answer farm...
Krashi Coaching
Mastering the Unannounced Regulatory Inspection
Mastering the Unannounced Regulatory Inspection
SafetyChain Software
Alper Gobel In Media Res Media Component
Alper Gobel In Media Res Media Component
InMediaRes1
Staff of Color (SOC) Retention Efforts DDSD
Staff of Color (SOC) Retention Efforts DDSD
David Douglas School District
Q4-W6-Restating Informational Text Grade 3
Q4-W6-Restating Informational Text Grade 3
JemimahLaneBuaron
Introduction to ArtificiaI Intelligence in Higher Education
Introduction to ArtificiaI Intelligence in Higher Education
pboyjonauth
Crayon Activity Handout For the Crayon A
Crayon Activity Handout For the Crayon A
UnboundStockton
Incoming and Outgoing Shipments in 1 STEP Using Odoo 17
Incoming and Outgoing Shipments in 1 STEP Using Odoo 17
Celine George
TataKelola dan KamSiber Kecerdasan Buatan v022.pdf
TataKelola dan KamSiber Kecerdasan Buatan v022.pdf
Sarwono Sutikno, Dr.Eng.,CISA,CISSP,CISM,CSX-F
Grant Readiness 101 TechSoup and Remy Consulting
Grant Readiness 101 TechSoup and Remy Consulting
TechSoup
The basics of sentences session 2pptx copy.pptx
The basics of sentences session 2pptx copy.pptx
heathfieldcps1
Paris 2024 Olympic Geographies - an activity
Paris 2024 Olympic Geographies - an activity
GeoBlogs
APM Welcome, APM North West Network Conference, Synergies Across Sectors
APM Welcome, APM North West Network Conference, Synergies Across Sectors
Association for Project Management
Presiding Officer Training module 2024 lok sabha elections
Presiding Officer Training module 2024 lok sabha elections
anshu789521
Recently uploaded
(20)
Sanyam Choudhary Chemistry practical.pdf
Sanyam Choudhary Chemistry practical.pdf
Código Creativo y Arte de Software | Unidad 1
Código Creativo y Arte de Software | Unidad 1
Model Call Girl in Tilak Nagar Delhi reach out to us at 🔝9953056974🔝
Model Call Girl in Tilak Nagar Delhi reach out to us at 🔝9953056974🔝
18-04-UA_REPORT_MEDIALITERAСY_INDEX-DM_23-1-final-eng.pdf
18-04-UA_REPORT_MEDIALITERAСY_INDEX-DM_23-1-final-eng.pdf
URLs and Routing in the Odoo 17 Website App
URLs and Routing in the Odoo 17 Website App
Separation of Lanthanides/ Lanthanides and Actinides
Separation of Lanthanides/ Lanthanides and Actinides
Kisan Call Centre - To harness potential of ICT in Agriculture by answer farm...
Kisan Call Centre - To harness potential of ICT in Agriculture by answer farm...
Mastering the Unannounced Regulatory Inspection
Mastering the Unannounced Regulatory Inspection
Alper Gobel In Media Res Media Component
Alper Gobel In Media Res Media Component
Staff of Color (SOC) Retention Efforts DDSD
Staff of Color (SOC) Retention Efforts DDSD
Q4-W6-Restating Informational Text Grade 3
Q4-W6-Restating Informational Text Grade 3
Introduction to ArtificiaI Intelligence in Higher Education
Introduction to ArtificiaI Intelligence in Higher Education
Crayon Activity Handout For the Crayon A
Crayon Activity Handout For the Crayon A
Incoming and Outgoing Shipments in 1 STEP Using Odoo 17
Incoming and Outgoing Shipments in 1 STEP Using Odoo 17
TataKelola dan KamSiber Kecerdasan Buatan v022.pdf
TataKelola dan KamSiber Kecerdasan Buatan v022.pdf
Grant Readiness 101 TechSoup and Remy Consulting
Grant Readiness 101 TechSoup and Remy Consulting
The basics of sentences session 2pptx copy.pptx
The basics of sentences session 2pptx copy.pptx
Paris 2024 Olympic Geographies - an activity
Paris 2024 Olympic Geographies - an activity
APM Welcome, APM North West Network Conference, Synergies Across Sectors
APM Welcome, APM North West Network Conference, Synergies Across Sectors
Presiding Officer Training module 2024 lok sabha elections
Presiding Officer Training module 2024 lok sabha elections
A novel method for time-binning rates of continuous character evolution on a phylogeny
1.
A novel method
for time-binning rates of continuous character evolution on a phylogeny Graeme T. Lloyd and Matt Friedman
2.
Coming soon… Fossilworks Intensive
Workshop in Analytical Paleobiology June-July 2014 University of Macquarie, Sydney fossilworks.org
3.
Acknowledgements Chris Organ Graham Slater
4.
Phylogeny in macroevolution
5.
Variable-rate models Trait Early Burst Late
Burst Time
6.
Rate Continuous rates Time
7.
Rate Continuous rates Time
8.
Continuous rates Raia et
al. 2013
9.
Guts Harmon et al.
2008
10.
Method
11.
Method
12.
Method
13.
Method
14.
Method S1 S2 1 S3
15.
Data Anderson et al.
2013
16.
Data Anderson et al.
2013
17.
“Equal” time-scaling Share time
with preceding (non-zero length) branch Traditional approach first τ8 τ8 τ7 τ7 τ6 τ6 τ5 τ5 root age Ruta et al. 2006; Brusatte et al. 2008
18.
Probabilistic time-scaling τ6 τ5 τ4 τ3 τ2 τ1 τ0 Hedman 2010
19.
Probabilistic time-scaling τ6 τ5 τ4 τ3 τ2 τ1 τ0 Age (Ma) τ0 Hedman
2010
20.
“Equal” time-tree
21.
Probabilistic time-tree
22.
Rates “Equal” timetree
23.
Rates “Equal” timetree
24.
Rates “Equal” timetree Probablistic timetree
25.
“Equal” rates with
error
26.
Probabilistic rates with
error
27.
Model complexity S1 S2
28.
Change in mode Ornstein-Uhlenbeck Brownian Slater
2013
29.
Conclusions
30.
Conclusions
31.
Conclusions
32.
Conclusions
Download now