Presented at 2013 Arkansas Association for Food Protection annual conference.
Janet R. Donaldson, Ph.D.
Mississippi State University
Department of Biological Sciences
The Codex of Business Writing Software for Real-World Solutions 2.pptx
Listeria and Omics Approaches for Understanding Its Biology
1. Janet R. Donaldson, Ph.D.
Mississippi State University
Department of Biological Sciences
donaldson@biology.msstate.edu
2. Listeria monocytogenes
One of the deadliest food-
borne pathogens
Cantaloupe outbreak in
2011 was the third most
deadly outbreak since
1924; killed 30 people
1st: E. coli O104:H4
outbreak of 2011; Killed 53
2nd: Listeria outbreak in
1985; Killed 52
3. Soil bacterium
Infects both humans and animals
Low pH, intracellular growth, high bile salts
5-10% of population are asymptomatic carriers
Grows in a wide range of temperatures (2°C to 39°C)
and environmental conditions (salt, mildly acidic)
Major problems with ready to eat foods, such as
smoked fish industry, deli meats, and cheese
Survives a variety of environments
4. It’s complicated…
Many factors contribute to the
complications of studying
Listeria monocytogenes
13 different serotypes, 4 genetic
lineages
Most food-borne outbreaks are related to serotype
4b, but 1/2a, 1/2b, and 4a are also important for human
and animal health
Conversion to L-forms
Formation of biofilms
Advances in molecular biology allowed for huge
advancements to be made in terms of monitoring
strain persistence in food processing plants
6. Advances in Omics
Vast amount of information
Transcriptomics
Proteomics
Secretomics
Metabolomics
Interactomics
7. Functional Proteomics Approach to
Answer Complicated Questions
How do basic metabolic processes differ between
different serotypes?
What are the mechanisms that allow for survival of
Listeria monocytogenes in stressful environments?
How do these strategies for survival differ between
different serotypes of Listeria monocytogenes?
8. Proteomics Analysis
Preparation of protein samples
Analyzed by HPLC coupled with nano-LTQ linear ion
trap mass spectrometer
Spectra analyzed against trypsin digested FASTA
database with converted file
Protein modifications need to be analyzed; analysis
run against decoy database
Protein expression comparisons made
based on spectral intensity
Significantly expressed proteins assigned
to classification category based on ListiList
9. Variations in proteome expression
EGDe (1/2a serotype)
and F2365 (4b)
proteomes differ in
stationary phase
F2365
total: 1427
(350)
EGD
total: 1754
(677)
Common
(1077)
Donaldson et al, 2009 Appl Environ Microbiol
F2365 EGDe
10. Expression of 322 proteins was significantly increased in
EGDe in comparison to F2365
Mostly in cell wall physiology and cell wall anchor proteins
Stress response proteins
UvrC, UvrA, MutS, MutY, RecN, GroEL, GroES, DnaK
Expression of 91 proteins was significantly decreased in
F2365 in comparison to EGDe
Flagellar biosynthesis protein
Chemotaxis protein CheY
Catalase
Thiol peroxidase
Proteins Differentially Expressed
Donaldson et al, 2009 Appl Environ Microbiol
11. Functional Proteomics Approach to
Answer Complicated Questions
How do basic metabolic processes differ between
different serotypes?
What are the mechanisms that allow for survival of
Listeria monocytogenes in stressful environments?
How do these strategies for survival differ between
different serotypes of Listeria monocytogenes?
12. Mechanisms that allow for survival
in stressful environments
Minimal exposure to one stressor can influence
resistance to another stressor
Methods used can increase resistance of Listeria
monocytogenes to other stressors encountered and
also influence its persistence in facilities
Studies have suggested overlap in adaptive
mechanisms used by L. monocytogenes to cold stress
and osmotic stress
13. Cold Smoking Process
Process involves:
Freeze/ thaw of fish to remove parasites
Brining with salt
Exposure to smoking conditions for less than 24 h
Packaging and storage
Can exposure to cold influence
survival under osmotic stress?
14. Functional Proteomics Approach to
Answer Complicated Questions
How do basic metabolic processes differ between
different serotypes?
What are the mechanisms that allow for survival of
Listeria monocytogenes in stressful environments?
How do these strategies for survival differ between
different serotypes of Listeria monocytogenes?
15.
16. Other studies…
Variations in the mechanism by which avirulent and
virulent strains of Listeria monocytogenes respond to
bile salt environments
Efficient repair mechanisms are essential for long term
survival
Variations in intracellular v. extracellular growth
between virulent and avirulent strains
Payne et al, 2013 J Med Microbiol
17. Conclusions
Proteomics has advanced our understanding of the biology
of Listeria monocytogenes
Variations between serotypes: provide insight into
ecological niches
Mechanisms for survival in presence of stressors:
Cross adaptation between cold and osmotic stress:
Proteins involved re-modeling of the cell wall and cell membrane
allow for the integrity and fluidity of the cell to be maintained in
response to osmotic stress
Variations between different serotypes in response to
stressors
Avirulent strains possess different mechanism to try to
survive in presence of bile salts than virulent strains
18. Thank You!
MSU
Joseph Pittman
Kendrick Currie
Jessica Grissett-Wilson
Gabe Posadas
Stephanie Vamenta
Angela Payne
Susan Bridges
Chamali Thanthiriwatte
Justin Thornton
Mark Lawrence
Bindu Nanduri
Tibor Pechan
Shane Burgess, Univ. AZ
Ken Pendarvis, Univ. AZ
Todd Callaway, USDA-ARS
Jeff Carroll, USDA-ARS
Joe Buntyn, UNL
Ty Schmidt, UNL
Tjakko Abee, Wageningen
University
Funding:
MSU ORED
MSU Dept. of Biological Sciences
DOE Sustainable Energy Research Center
MAFES Special Research Initiatives
NIH (T35RR007071)