BioHackathon 2010 Intro

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Brad Chapman

BioHackathon 2010 Intro http://hackathon3.dbcls.jp/

Diversão e humor

Brad Chapman
Aﬃliation
Department of Molecular Biology
Massachusetts General Hospital, Boston, US

Projects
Biopython: http://biopython.org

Contacts
chapmanb@50mail.com
http://bcbio.wordpress.com
http://friendfeed.com/chapmanb
http://www.linkedin.com/pub/
brad-chapman/3/300/8ba

Biology

Many organisms (Human, Mouse,
Arabidopsis, C elegans)
Next generation sequencing
Comparative genomics
Synthetic biology

Computation

Open source software (Python)
Web presentation (Galaxy)
Visualization (R)
Data availability (REST)

Hackathon

Learn
Existing RDF data resources
Approaches for storing/querying data
Implement
Python libraries to simplify data access
Tools to ease providing RDF content

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