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BIOTECHNOLOGBIOTECHNOLOG
YY
““Unwinding the helical mystery”Unwinding the helical mystery”
What is Biotechnology ???
Technology based on biological sciences
that includes
 Agriculture
 Food science
 Genetics
 Medicine
Bioengineering
Using scientific methods with organisms to
produce new products or new forms of
organisms
Techniques used to produce or modify
plants and animals or its substances and
utilize microorganisms for specific use
APPLICATIONS
A multidisciplinary field involving number of
interrelated subjects
SCIENCE
 Physical sciences
 Life sciences
 Social sciences
MATHEMATICS
 Statistics
APPLIED SCIENCES
 Computer applications
 Agriculture
 Instrumentation
What Are the Stages of Biotechnology
Development
• Ancient biotechnologyAncient biotechnology-- early history as
related to food and shelter; Includes
domestication
• Classical biotechnology-Classical biotechnology- built on ancient
biotechnology; Fermentation promoted food
production, and medicine
• Modern biotechnology-Modern biotechnology- manipulates
genetic information in organism; Genetic
engineering
Animal cloning
Gene cloning for
pharmaceutical production
The promise and perhaps
perils of embryonic stem cells
DNA fingerprinting
Genetically modified
foods and the
American-European
opinion divide.
Basics of Biotechnology
• Biochemistry
• Microbiology
• Cell biology
• Molecular
biology
Areas of Biotechnology
• Genetic Engineering
• Protein engineering
• Bioinformatics
• Immunology
• Plant biotechnology
• Animal biotechnology
• Cancer biology
• Environmental Biotechnology
• Marine Biotechnology
• Nano biotechnology
• Pharmacology
GENETIC ENGINEERING
 Genetic modification of
an organism’s genes
 It uses techniques to
alter the structure and
characteristics of
genes
Central dogma of Molecular Biology
Recombinant DNA technology
Technology involving removing, modifying and
inserting the gene of interest
rDNA technology requires
• Vectors
• Plasmids
• Restriction Enzyme
• DNA sequence and templates
• Living organism
Producing Recombinant molecules
1. Isolate the gene
2. Insert it in a host using a vector
3. Produce as many copies of the host as
possible
4. Separate and purify the product of the
gene
Plasmids are Used to Replicate a Recombinant DNA
• Plasmids are small circles of DNA found in bacteria
• Plasmids replicate independently of the bacterial chromosome
• Replication often produces 50-100 copies of a recombinant
plasmid in each cell
• Pieces of foreign DNA can be added within a plasmid to create a
recombinant plasmid
Human Insulin
PCR
Polymerase chain reaction is an in vitroin vitro
technique used for the amplification of
DNA
It can amplify 10^5 copies of DNA from
two single strands of DNA after 30 cycles
This is achieved by PrimersPrimers,
complementary sequences of defined DNA
templates
PCR technique is applied for detecting
pathogens, study of DNA polymorphism,
molecular mapping, DNA finger printing
PCR steps
Denaturation at 94°c
for 20-30 sec
Annealing at ~50°c
for 20-60 sec
Extension at 72°c
for 30-60 sec
PCR machine
Applications of Genetic Engineering
• Insertion of genes from one organism to
another
• Producing recombinant cytokines, growth
factors, hormones like insulin, enzymes
• Recombinant vaccines, nitrogen fertilizers,
amylase synthesis for cellulose
degradation using plasmid technology
• Transgenic plants and animals
• Animal cloning
• DNA finger printing technology used in
forensic sciences
Transgenic Animals
Animals that undergo
deliberate modification in the
structure of its genomegenome by
inserting genes of other
species. Transgenesis
produced animals like mice,
pig, cattle and sheep. This
technology has applications
in agriculture and medicine
Transgenic Plants
• Plants that can be genetically
modified by inserting other
plant genomes for the
effective production of crops
and plants using plant
breeding or tissue culture
techniques
• This recombinant technology
produced many insect,
herbicide, fungal, bacterial
and virus resistance varieties
Animal Cloning
Animal Cloning is the process
by which an entire organism is
reproduced from a single cell
taken from the parent organism
and in a genetically identical
manner. This means the cloned
animal is an exact duplicate in
every way of its parent; it has the
same exact DNA
It can happen naturally for
instance: Asexual reproduction in
certain organisms and the
development of twins from a
single fertilized egg
Development of Cloning
• Scientists have been producing cloned animals
from embryonic cells for long time but they do not
live longer
• The first cloned animal that lived longer and
reproduced naturally later was, Dolly the sheep
• Dolly was created from developed mammary
gland cells taken from a full grown sheep
• Pigs, cats, rats, horses and deer are successful
cloned animals after dolly
Procedure of Animal cloning
• Extract DNA nucleus from developed
embryonic cells
• Implant into an unfertilized egg from which
the nucleus had already taken
• Cells are developed from the process of
replication
• These cells are implanted into host
mothers
• Cloned animal that resulted had a genetic
make-up exactly identical to the genetic
make-up of the original cell.
Reproductive
cloning
The Next step of
Cloning ?????
Extremely improbable
Bioinformatics
• Bioinformatics is the study of science in
which biologybiology, computer sciencecomputer science and
information technologyinformation technology merge into single
field
• Managing and analyzing biological data
using advanced computing techniques
• Major research efforts in the field include
sequence alignment, finding gene,
genome assembly, protein structure
alignment, protein structure prediction,
prediction of gene expression and protein-
protein interactions, and the modelling of
evolution
Computers and Bioinformatics
 Bioinformatics is the computer assisted
data management field that helps us
 Gather
 Store
 Analyze
 Integrate
biological and genetic information ( data )
 Bioinformatics is the “Electronic“Electronic
Infrastructure of Molecular BiologyInfrastructure of Molecular Biology””
 There are many different Bioinformatics
tools available online that contains biological
databases. Commercial software are also used
by researchers
 It is associated with massive databases of
gene and protein sequences and structure/function
information databases
 New sequences, new structure, protein or gene
function that are discovered, searched, gathered
and deposited into databases
What is done ?
• Analysis and Interpretation
• Development of new Algorithm
and Statistics
• Development and
Implementation of tools
Units of Information
DNA
RNA
Protein
Sequence
Structure
Evolution
Pathways
Interaction
Mutation
Biological Data used in
Bioinformatics
DNA ( Genome )
RNA ( Transcriptome )
Proteins ( proteome )
DNA analysis
 Simple sequence analysis
Database searching
Pairwise analysis
 Regulatory regions
 Gene finding
 Whole genome annotation
 Comparative Genomics where species
and strains can be analyzed
RNA analysis
 Splicing variant
 Tissue specific expression
 Structure
 Single gene analysis ( various cloning
techniques )
 Experimental data involving thousands of
genes simultaneously
 DNA chips, Microarrays and Expression
arrays analysis
Protein
• Proteome of an organism
• Structure
• 2D gel
• 2D structure
• 3D structure
• Mass spectroscopy
0101011101100101011001010111010000101101
0101101100100111111011010011010000101101
A A C G T C A T T C G A T G A T T C G A
Just as we can teach a computer to predict
things about a sequence of letters in English
prose, we can also teach it to predict things
about a other sequences—like a genetic
sequence
Systems Biology
• Metabolic
Pathways
• Regulatory
Networks
• Whole
organism
Phylogeny
Applications
• Medical
 Understand life processes in healthy and
disease states
 Genetic diseases
• Biotech and Pharmaceutical
 To find or develop new and better drug
 Designing drug (Gene or Structure based)
• Agriculture
 Disease, drought, heat resistant plants
 High yielding crops
DNA Microarray
Gene expression patterns of whole
genomic analysis of many organisms have
been achieved by DNA microarraysDNA microarrays. High
density microarrays allowed global
analysis of expression pattern to
determine the cellular function of genes,
the nature and regulation of biochemical
pathways, and the regulatory mechanisms
at play during certain signaling conditions
or diseases.
Preparation of Microarrays
DNA Microarray
Applications of DNA Microarray
Detect pathogens from blood
samples
Examine targets for drug discovery
Determine gene expression changes
for diseases like cancer
Identify inheritable markers which is
used as genotyping tool
Cancer biology
Cancer is a group of
disease due to
uncontrolled celluncontrolled cell
proliferation andproliferation and
differentiationdifferentiation
Cancer biology deals with
studies of all types of
cancer and different
forms of therapies
involved
How cancers are caused ?
• Any alteration in the genetic material
• Effects of physical and chemical
carcinogens
• Errors in DNA replication or inheritance
• Misexpressed growth factors
• Activated Mutation and over expression
Cell Cycle
Apoptosis
Tumor suppressor genes
Genes that reduces the probability of cells
turning into tumor cells.
A mutation or deletion of such genes will
increase the probability of formation of
tumors
Examples : p53, RB1, WT1, DCC etc
Inactivation of one allele of some tumor
suppressor genes is sufficient to cause
tumors
Tumor markersTumor markers are used to identify these
genes. E.g. CA 27.29, PSA, CA-125 etc
Carcinogens
( Agents that cause cancer )
Physical carcinogenesis
Ionizing radiations like X-rays, α particles,
γ rays which are >10eV
Non ionizing radiations like UV rays,
microwaves, Ultrasound which are <10eV
Chemical carcinogenesis
Organic chemical carcinogen
Inorganic chemical carcinogen
Inert chemical carcinogen
Hormonal carcinogen
Types of cancer
Generally cancers can be classified as
Benign tumorsBenign tumors and Malignant tumorsMalignant tumors
• Carcinoma ( adenocarcinama, squamous
cell carcinoma )
• Sarcoma ( fibro sarcoma, liposarcoma )
• Lymphoma ( chronic lymphocytic
leukemia, AIDS related lymphoma )
• Blastoma (fibroma, chondroma, osteoma,
adenoma )
Screening and Diagnosis of cancer
• Screening testScreening test
Mammography
Cervical smear or Pap test
Endoscopies
Examination of faecal occult blood test
• DiagnosisDiagnosis
Histopathological examination( biopsy )
Endoscopy (broncho, colono, cysto,
duodeno, gastro, lapro)
Biomarker studies (CA 15-3, PSA, AFP )
Imaging ( x rays, MRI, CT, PET scan )
Cancer therapy
• Chemotherapy
• Radiation therapy
• Gene therapy ( in vivo and ex vivo )
• Monoclonal antibody therapy
• Immunotherapy
• Hormonal therapy
• Symptom control drugs
• Angiogenesis inhibitor
Monoclonal antibodies
• Antibodies produced from
single epitope of an antigen
• Polyclonal antibodies that
produces antiserum affect
the normal cells
• But MAbs produced from
single clones react with
single antigenic
determinants
• It’s a technique for in vitro
production of antibodies
using HybridomaHybridoma
technologytechnology
Production of MAbs
Fusing myeloma cells
and spleen cells of mice
Uses of MAbs
 Antigen detection
 Tumor related antigen detection
 Imaging agent
 Immunoscintigraphy
 Pregnancy and Sex determination
 Against viral and bacterial infections
 Producing anti-idiotype antibodies
 Immnuo diagnostic reagents
Plant Biotechnology
 Genetically modified crops
and plants
 Transgenic plants
 Plant tissue culture
 Therapeutic plants
 Molecular pharming
Engineering plants
genetically is Plant
Biotechnology
Methods of plant gene delivery
1. Agro bacterium mediated gene transfer
(most widely used method)
2. Gene gun / biolistic method
3. Electroporation
4. Microinjection
5. Viral vector method
Ti plasmid of A.tumefaciens
Mode of gene transfer
Transgenic plants
Genetically modified
( GM ) crops improved
food production for the
growing population by
producing transgenic
plants. GM crops include
cotton, mustard, potato,
maize, wheat, cassava,
yams, sorghum, rice,
millet etc.
GM technology
• Pest resistant plants
• Herbicide resistant plants
• Virus and fungal resistant plants
• Modification of plant oil biosynthesis
• Extended shell life of fruits
• Medicinal plants producing vaccines
• Nutritional enrichment/synthetic seeds
• Tolerance to abiotic stress ( heat, drought,
cold, saline )
Transgenic rice
• Introduction of three genes
into rice ( one from daffodil
and two from
microorganism ) exhibits
an increased production ofproduction of
ββ-carotene-carotene as a precursor
to vitamin A in the
endosperm of the rice
Golden rice
To alleviate vitamin A
deficiency problem,
development of a rice
variety which produces
β-carotene in the edible
grains of the rice
Extended shelf life of fruit
A major problem in fruit marketing is
premature ripening and softeningpremature ripening and softening during
transport. These changes are part of the
natural ageing ( senescencesenescence ) process of
the fruit. Ripening of fruit is closely
associated with increase in
polygalaturanase activity
Flavr Savr Tomato
Antisense RNA against
the enzyme activity
developed to inhibit the
synthesis of the enzyme
and delayed the fruit
ripening of tomato by GM
technology. These tomato
have longer shelf life
called as “FLAVR SAVR“FLAVR SAVR
TOMATO”TOMATO”
Plant tissue culture
Plant tissue culture is a novel and
innovative technique to grow high quality,
disease free plantsdisease free plants quickly and in a large
quantity by culturing and maintaining plant
cells or organs like leaves, stem, root,
branch shoot tip, petals, anther and pollen in
sterile
Tissue culture process
Gene gun method
DNA finger printing
Basics of finger printing
• A DNA fingerprint is made by
analyzing the sizes of DNA
fragments produced from a
number of different sites in the
genome that vary in length
The more common the length
variation at a particular site and
the greater the number the sites
analyzed, the more informative
the fingerprint
Stem cell
A stem cell is an
undifferentiated,
dividing cell that gives
rise to a daughter cell
like itself and a
daughter cell that
becomes a
specialized cell type.
Embryonic stem cell
Nano biotechnology
Nano-TechnologyNano-Technology is one of the emerging interdisciplinary
fields which is about to bring a technological revolution. It
is a engineering at the atomic or molecular scale, deals
with devices typically less than 100 nanometers in sizeless than 100 nanometers in size,
or one billionth of a meter, or one ten-thousandth the
width of a human hair
Nanotechnology provides a new basis for innovation in
the life sciences, revolutionary biotechnology processes,
the synthesis of new drugs and their targeted delivery,
regenerative medicine, neuromorphic engineering stem
cell research, genomics, proteomics as well as the well-
established fields of agriculture, environmental
management, medical device manufacturing
Nanobots
• A nanorobot is a specialized
nanomachinenanomachine designed to perform
a specific task or tasks repeatedly
and with precision. Nanorobots
have dimensions on the order of
nanometers
• The nanorobot developed to kill
the cancer cells would have a small
computer, several binding sites to
determine the concentration of
specific molecules, and a supply of
some toxin, which could be
selectively released to kill a cell
identified as cancerous.
Applications
• Nanobomb
• Nanoimaging
• Nano drug delivery
• Microbivore
• Artificial mechanical phagocytes
• Tissue reconstruction
• Frying tumors
• Quantum dots
Ethical Arguments
Ethical argument for or against the following
topics
• Human Cloning
• Gender Reversal on Livestock
• Gender Reversal on Humans
• Genetic Engineering of Plants
• Genetic Engineering of Humans
Career opportunities
BiotechnologyBiotechnology is a new and innovative
industry with innumerable career options
for anyone interested in life sciences.
Biotechnology has changed the quality of
life through improved medicine,medicine,
diagnostics, agriculture and wastediagnostics, agriculture and waste
managementmanagement. Because the field of
biotechnology is still relatively new, there is
an abundance of unique opportunities to
make new discoveries and introduce
useful innovations to the world.
Occupational opportunities
• Research
• Quality control
• Manufacturing and production
• Regulatory affairs
• Administration
• Information system
• Clinical research
• Marketing and sales
Scope of biotechnology
• Genetically engineered microbes are today
widely used for producing drugs and vaccines
in large scale at low costs that are of great
importance (human insulin, erythropoietin, and(human insulin, erythropoietin, and
hepatitis-B vaccine)hepatitis-B vaccine)
• Genetically engineering plants are also poised
to produce vaccinesvaccines
• One of the future sources of cheap protein-cheap protein-
drugsdrugs in the coming years, would be genetically
engineered animals who would secrete drugs
in abundance
The Indian advantage
• No other country in the world today has the unique
set of advantages that India offers for large-scale
practice of biotechnology. We have one of the
largest bio in the world
• We have at least seven distinct climatic zonesseven distinct climatic zones and
one of the largest and most varied sets of marine
organisms anywhere
• The ambient temperatureambient temperature in most parts of the
country is just what living organisms need for their
activities that result in a biotechnological product
• We have large tracts of land available for growinglarge tracts of land available for growing
the desired plantsthe desired plants required for agriculture-based
biotechnology
Future belongs to
Biotechnology
BiotechnologyBiotechnology gives answer to many
burning problems like food scarcity,food scarcity,
ecological problems , pharmaceuticalecological problems , pharmaceutical
sector dropsector drop and spans its wings to almost
all living World problems. Although there is
lot of hype in media about the sector, but
unfortunately in India [and in many
countries surprisingly] it has not got due
attention till yet. Government has started
taking steps and new institutions are built
and skill has started coming up
Biotechnology

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Biotechnology

  • 1. BIOTECHNOLOGBIOTECHNOLOG YY ““Unwinding the helical mystery”Unwinding the helical mystery”
  • 2. What is Biotechnology ??? Technology based on biological sciences that includes  Agriculture  Food science  Genetics  Medicine
  • 3. Bioengineering Using scientific methods with organisms to produce new products or new forms of organisms Techniques used to produce or modify plants and animals or its substances and utilize microorganisms for specific use
  • 4. APPLICATIONS A multidisciplinary field involving number of interrelated subjects SCIENCE  Physical sciences  Life sciences  Social sciences MATHEMATICS  Statistics APPLIED SCIENCES  Computer applications  Agriculture  Instrumentation
  • 5. What Are the Stages of Biotechnology Development • Ancient biotechnologyAncient biotechnology-- early history as related to food and shelter; Includes domestication • Classical biotechnology-Classical biotechnology- built on ancient biotechnology; Fermentation promoted food production, and medicine • Modern biotechnology-Modern biotechnology- manipulates genetic information in organism; Genetic engineering
  • 6. Animal cloning Gene cloning for pharmaceutical production The promise and perhaps perils of embryonic stem cells DNA fingerprinting Genetically modified foods and the American-European opinion divide.
  • 7. Basics of Biotechnology • Biochemistry • Microbiology • Cell biology • Molecular biology
  • 8. Areas of Biotechnology • Genetic Engineering • Protein engineering • Bioinformatics • Immunology • Plant biotechnology • Animal biotechnology • Cancer biology • Environmental Biotechnology • Marine Biotechnology • Nano biotechnology • Pharmacology
  • 9. GENETIC ENGINEERING  Genetic modification of an organism’s genes  It uses techniques to alter the structure and characteristics of genes
  • 10. Central dogma of Molecular Biology
  • 11. Recombinant DNA technology Technology involving removing, modifying and inserting the gene of interest rDNA technology requires • Vectors • Plasmids • Restriction Enzyme • DNA sequence and templates • Living organism
  • 12. Producing Recombinant molecules 1. Isolate the gene 2. Insert it in a host using a vector 3. Produce as many copies of the host as possible 4. Separate and purify the product of the gene
  • 13. Plasmids are Used to Replicate a Recombinant DNA • Plasmids are small circles of DNA found in bacteria • Plasmids replicate independently of the bacterial chromosome • Replication often produces 50-100 copies of a recombinant plasmid in each cell • Pieces of foreign DNA can be added within a plasmid to create a recombinant plasmid
  • 15. PCR Polymerase chain reaction is an in vitroin vitro technique used for the amplification of DNA It can amplify 10^5 copies of DNA from two single strands of DNA after 30 cycles This is achieved by PrimersPrimers, complementary sequences of defined DNA templates PCR technique is applied for detecting pathogens, study of DNA polymorphism, molecular mapping, DNA finger printing
  • 16. PCR steps Denaturation at 94°c for 20-30 sec Annealing at ~50°c for 20-60 sec Extension at 72°c for 30-60 sec
  • 18. Applications of Genetic Engineering • Insertion of genes from one organism to another • Producing recombinant cytokines, growth factors, hormones like insulin, enzymes • Recombinant vaccines, nitrogen fertilizers, amylase synthesis for cellulose degradation using plasmid technology • Transgenic plants and animals • Animal cloning • DNA finger printing technology used in forensic sciences
  • 19. Transgenic Animals Animals that undergo deliberate modification in the structure of its genomegenome by inserting genes of other species. Transgenesis produced animals like mice, pig, cattle and sheep. This technology has applications in agriculture and medicine
  • 20. Transgenic Plants • Plants that can be genetically modified by inserting other plant genomes for the effective production of crops and plants using plant breeding or tissue culture techniques • This recombinant technology produced many insect, herbicide, fungal, bacterial and virus resistance varieties
  • 21. Animal Cloning Animal Cloning is the process by which an entire organism is reproduced from a single cell taken from the parent organism and in a genetically identical manner. This means the cloned animal is an exact duplicate in every way of its parent; it has the same exact DNA It can happen naturally for instance: Asexual reproduction in certain organisms and the development of twins from a single fertilized egg
  • 22. Development of Cloning • Scientists have been producing cloned animals from embryonic cells for long time but they do not live longer • The first cloned animal that lived longer and reproduced naturally later was, Dolly the sheep • Dolly was created from developed mammary gland cells taken from a full grown sheep • Pigs, cats, rats, horses and deer are successful cloned animals after dolly
  • 23. Procedure of Animal cloning • Extract DNA nucleus from developed embryonic cells • Implant into an unfertilized egg from which the nucleus had already taken • Cells are developed from the process of replication • These cells are implanted into host mothers • Cloned animal that resulted had a genetic make-up exactly identical to the genetic make-up of the original cell.
  • 25. The Next step of Cloning ?????
  • 27. Bioinformatics • Bioinformatics is the study of science in which biologybiology, computer sciencecomputer science and information technologyinformation technology merge into single field • Managing and analyzing biological data using advanced computing techniques • Major research efforts in the field include sequence alignment, finding gene, genome assembly, protein structure alignment, protein structure prediction, prediction of gene expression and protein- protein interactions, and the modelling of evolution
  • 28. Computers and Bioinformatics  Bioinformatics is the computer assisted data management field that helps us  Gather  Store  Analyze  Integrate biological and genetic information ( data )  Bioinformatics is the “Electronic“Electronic Infrastructure of Molecular BiologyInfrastructure of Molecular Biology””
  • 29.  There are many different Bioinformatics tools available online that contains biological databases. Commercial software are also used by researchers  It is associated with massive databases of gene and protein sequences and structure/function information databases  New sequences, new structure, protein or gene function that are discovered, searched, gathered and deposited into databases
  • 30. What is done ? • Analysis and Interpretation • Development of new Algorithm and Statistics • Development and Implementation of tools
  • 32. Biological Data used in Bioinformatics DNA ( Genome ) RNA ( Transcriptome ) Proteins ( proteome )
  • 33. DNA analysis  Simple sequence analysis Database searching Pairwise analysis  Regulatory regions  Gene finding  Whole genome annotation  Comparative Genomics where species and strains can be analyzed
  • 34. RNA analysis  Splicing variant  Tissue specific expression  Structure  Single gene analysis ( various cloning techniques )  Experimental data involving thousands of genes simultaneously  DNA chips, Microarrays and Expression arrays analysis
  • 35. Protein • Proteome of an organism • Structure • 2D gel • 2D structure • 3D structure • Mass spectroscopy
  • 36. 0101011101100101011001010111010000101101 0101101100100111111011010011010000101101 A A C G T C A T T C G A T G A T T C G A Just as we can teach a computer to predict things about a sequence of letters in English prose, we can also teach it to predict things about a other sequences—like a genetic sequence
  • 37. Systems Biology • Metabolic Pathways • Regulatory Networks • Whole organism Phylogeny
  • 38. Applications • Medical  Understand life processes in healthy and disease states  Genetic diseases • Biotech and Pharmaceutical  To find or develop new and better drug  Designing drug (Gene or Structure based) • Agriculture  Disease, drought, heat resistant plants  High yielding crops
  • 39. DNA Microarray Gene expression patterns of whole genomic analysis of many organisms have been achieved by DNA microarraysDNA microarrays. High density microarrays allowed global analysis of expression pattern to determine the cellular function of genes, the nature and regulation of biochemical pathways, and the regulatory mechanisms at play during certain signaling conditions or diseases.
  • 42. Applications of DNA Microarray Detect pathogens from blood samples Examine targets for drug discovery Determine gene expression changes for diseases like cancer Identify inheritable markers which is used as genotyping tool
  • 43. Cancer biology Cancer is a group of disease due to uncontrolled celluncontrolled cell proliferation andproliferation and differentiationdifferentiation Cancer biology deals with studies of all types of cancer and different forms of therapies involved
  • 44. How cancers are caused ? • Any alteration in the genetic material • Effects of physical and chemical carcinogens • Errors in DNA replication or inheritance • Misexpressed growth factors • Activated Mutation and over expression
  • 47. Tumor suppressor genes Genes that reduces the probability of cells turning into tumor cells. A mutation or deletion of such genes will increase the probability of formation of tumors Examples : p53, RB1, WT1, DCC etc Inactivation of one allele of some tumor suppressor genes is sufficient to cause tumors Tumor markersTumor markers are used to identify these genes. E.g. CA 27.29, PSA, CA-125 etc
  • 48. Carcinogens ( Agents that cause cancer ) Physical carcinogenesis Ionizing radiations like X-rays, α particles, γ rays which are >10eV Non ionizing radiations like UV rays, microwaves, Ultrasound which are <10eV Chemical carcinogenesis Organic chemical carcinogen Inorganic chemical carcinogen Inert chemical carcinogen Hormonal carcinogen
  • 49. Types of cancer Generally cancers can be classified as Benign tumorsBenign tumors and Malignant tumorsMalignant tumors • Carcinoma ( adenocarcinama, squamous cell carcinoma ) • Sarcoma ( fibro sarcoma, liposarcoma ) • Lymphoma ( chronic lymphocytic leukemia, AIDS related lymphoma ) • Blastoma (fibroma, chondroma, osteoma, adenoma )
  • 50. Screening and Diagnosis of cancer • Screening testScreening test Mammography Cervical smear or Pap test Endoscopies Examination of faecal occult blood test • DiagnosisDiagnosis Histopathological examination( biopsy ) Endoscopy (broncho, colono, cysto, duodeno, gastro, lapro) Biomarker studies (CA 15-3, PSA, AFP ) Imaging ( x rays, MRI, CT, PET scan )
  • 51. Cancer therapy • Chemotherapy • Radiation therapy • Gene therapy ( in vivo and ex vivo ) • Monoclonal antibody therapy • Immunotherapy • Hormonal therapy • Symptom control drugs • Angiogenesis inhibitor
  • 52. Monoclonal antibodies • Antibodies produced from single epitope of an antigen • Polyclonal antibodies that produces antiserum affect the normal cells • But MAbs produced from single clones react with single antigenic determinants • It’s a technique for in vitro production of antibodies using HybridomaHybridoma technologytechnology
  • 53. Production of MAbs Fusing myeloma cells and spleen cells of mice
  • 54.
  • 55. Uses of MAbs  Antigen detection  Tumor related antigen detection  Imaging agent  Immunoscintigraphy  Pregnancy and Sex determination  Against viral and bacterial infections  Producing anti-idiotype antibodies  Immnuo diagnostic reagents
  • 56. Plant Biotechnology  Genetically modified crops and plants  Transgenic plants  Plant tissue culture  Therapeutic plants  Molecular pharming Engineering plants genetically is Plant Biotechnology
  • 57. Methods of plant gene delivery 1. Agro bacterium mediated gene transfer (most widely used method) 2. Gene gun / biolistic method 3. Electroporation 4. Microinjection 5. Viral vector method
  • 58. Ti plasmid of A.tumefaciens
  • 59. Mode of gene transfer
  • 60. Transgenic plants Genetically modified ( GM ) crops improved food production for the growing population by producing transgenic plants. GM crops include cotton, mustard, potato, maize, wheat, cassava, yams, sorghum, rice, millet etc.
  • 61. GM technology • Pest resistant plants • Herbicide resistant plants • Virus and fungal resistant plants • Modification of plant oil biosynthesis • Extended shell life of fruits • Medicinal plants producing vaccines • Nutritional enrichment/synthetic seeds • Tolerance to abiotic stress ( heat, drought, cold, saline )
  • 62. Transgenic rice • Introduction of three genes into rice ( one from daffodil and two from microorganism ) exhibits an increased production ofproduction of ββ-carotene-carotene as a precursor to vitamin A in the endosperm of the rice
  • 63. Golden rice To alleviate vitamin A deficiency problem, development of a rice variety which produces β-carotene in the edible grains of the rice
  • 64. Extended shelf life of fruit A major problem in fruit marketing is premature ripening and softeningpremature ripening and softening during transport. These changes are part of the natural ageing ( senescencesenescence ) process of the fruit. Ripening of fruit is closely associated with increase in polygalaturanase activity
  • 65. Flavr Savr Tomato Antisense RNA against the enzyme activity developed to inhibit the synthesis of the enzyme and delayed the fruit ripening of tomato by GM technology. These tomato have longer shelf life called as “FLAVR SAVR“FLAVR SAVR TOMATO”TOMATO”
  • 66. Plant tissue culture Plant tissue culture is a novel and innovative technique to grow high quality, disease free plantsdisease free plants quickly and in a large quantity by culturing and maintaining plant cells or organs like leaves, stem, root, branch shoot tip, petals, anther and pollen in sterile
  • 70. Basics of finger printing • A DNA fingerprint is made by analyzing the sizes of DNA fragments produced from a number of different sites in the genome that vary in length The more common the length variation at a particular site and the greater the number the sites analyzed, the more informative the fingerprint
  • 71. Stem cell A stem cell is an undifferentiated, dividing cell that gives rise to a daughter cell like itself and a daughter cell that becomes a specialized cell type.
  • 73. Nano biotechnology Nano-TechnologyNano-Technology is one of the emerging interdisciplinary fields which is about to bring a technological revolution. It is a engineering at the atomic or molecular scale, deals with devices typically less than 100 nanometers in sizeless than 100 nanometers in size, or one billionth of a meter, or one ten-thousandth the width of a human hair Nanotechnology provides a new basis for innovation in the life sciences, revolutionary biotechnology processes, the synthesis of new drugs and their targeted delivery, regenerative medicine, neuromorphic engineering stem cell research, genomics, proteomics as well as the well- established fields of agriculture, environmental management, medical device manufacturing
  • 74. Nanobots • A nanorobot is a specialized nanomachinenanomachine designed to perform a specific task or tasks repeatedly and with precision. Nanorobots have dimensions on the order of nanometers • The nanorobot developed to kill the cancer cells would have a small computer, several binding sites to determine the concentration of specific molecules, and a supply of some toxin, which could be selectively released to kill a cell identified as cancerous.
  • 75.
  • 76. Applications • Nanobomb • Nanoimaging • Nano drug delivery • Microbivore • Artificial mechanical phagocytes • Tissue reconstruction • Frying tumors • Quantum dots
  • 77. Ethical Arguments Ethical argument for or against the following topics • Human Cloning • Gender Reversal on Livestock • Gender Reversal on Humans • Genetic Engineering of Plants • Genetic Engineering of Humans
  • 78. Career opportunities BiotechnologyBiotechnology is a new and innovative industry with innumerable career options for anyone interested in life sciences. Biotechnology has changed the quality of life through improved medicine,medicine, diagnostics, agriculture and wastediagnostics, agriculture and waste managementmanagement. Because the field of biotechnology is still relatively new, there is an abundance of unique opportunities to make new discoveries and introduce useful innovations to the world.
  • 79. Occupational opportunities • Research • Quality control • Manufacturing and production • Regulatory affairs • Administration • Information system • Clinical research • Marketing and sales
  • 80. Scope of biotechnology • Genetically engineered microbes are today widely used for producing drugs and vaccines in large scale at low costs that are of great importance (human insulin, erythropoietin, and(human insulin, erythropoietin, and hepatitis-B vaccine)hepatitis-B vaccine) • Genetically engineering plants are also poised to produce vaccinesvaccines • One of the future sources of cheap protein-cheap protein- drugsdrugs in the coming years, would be genetically engineered animals who would secrete drugs in abundance
  • 81. The Indian advantage • No other country in the world today has the unique set of advantages that India offers for large-scale practice of biotechnology. We have one of the largest bio in the world • We have at least seven distinct climatic zonesseven distinct climatic zones and one of the largest and most varied sets of marine organisms anywhere • The ambient temperatureambient temperature in most parts of the country is just what living organisms need for their activities that result in a biotechnological product • We have large tracts of land available for growinglarge tracts of land available for growing the desired plantsthe desired plants required for agriculture-based biotechnology
  • 82. Future belongs to Biotechnology BiotechnologyBiotechnology gives answer to many burning problems like food scarcity,food scarcity, ecological problems , pharmaceuticalecological problems , pharmaceutical sector dropsector drop and spans its wings to almost all living World problems. Although there is lot of hype in media about the sector, but unfortunately in India [and in many countries surprisingly] it has not got due attention till yet. Government has started taking steps and new institutions are built and skill has started coming up