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MSc Clinical Microbiology
Paula Funnell
p.a.funnell@qmul.ac.uk
Senior Academic Liaison Librarian (Medicine and Dentistry)
Searching for Information
Learning outcomes
• To be introduced to the library website
and search tools
• To know where to look for good quality
information on the web
• To learn how to use key medical
databases effectively
• To manage references effectively
using EndNote
Library website
www.library.qmul.ac.uk
Search engines
• Search engine = supermarket
• Photo by vauvau (http://flic.kr/p/75yAAb)
• Searches across many DIFFERENT
things
Healthcare specific
search engines
• Search specifically across healthcare
related resources
• Search across good quality internet
resources
• Much more manageable number of
results
Evidence Search
• Easy to use
• Searches across high-quality
healthcare specific resources
• Provided and managed by NICE
• Wide range of filters allow you to
narrow down your search e.g. by type
of information or date of publication
www.evidence.nhs.uk
TRIP
• One simple search box
• Results are colour coded giving an at
a glance indication of quality of
information
• Results vary widely - including
primary research, reviews, textbooks
and news
www.tripdatabase.com
Databases
• Databases – florist
• Photo by stevewhis (http://flic.kr/p/a4h4RJ)
• Collection of SAME thing
Databases
• Vast collections of references of
published research
• Filters can be applied to narrow results
down
• Searches can be combined and saved
for future use
• References can be imported to
EndNote
MEDLINE (PubMed)
• PubMed is a search interface for the
MEDLINE database
• Database of references and abstracts
of journal articles
• Covers the broad field of biomedicine
• Special QM PubMed address for
easier full-text access
www.ncbi.nlm.nih.gov/entrez/query.fcgi?otool=igbqmullib
Web of Science
• Part of ISI Web of Knowledge
• Contains:
– Science Citation Index
– Social Sciences Citation Index
– Arts and Humanities Citation Index
• Need to log in off campus
www.webofknowledge.com
Scopus
• World’s largest abstract and citation
database
• Search across a range of subject
areas
• Includes Medline coverage
• Need to log in off campus
www.scopus.com
The Cochrane Library
• High quality systematic reviews
• Already been critically appraised
• Full text available
• Also contains abstracts of other
systematic reviews and clinical trials
www.thecochranelibrary.com
Broadening your search
• An OR search – combine two
synonyms to give a larger number of
results
• Child health OR paediatrics will
search for any articles containing
one or both of the terms
Broadening your search
• Truncation – add an asterisk to the
stem of a word
• Injur* will search for
injury, injuries, injured, injuring . . .
Narrowing your search
• An AND search – combine two
elements of your search question to
give a smaller number of results
• Asthma AND children will search for
any articles containing both of the
terms
Narrowing your search
• Phrase searching – enclose phrase
within quotation marks
• “diabetes mellitus” will return results
where diabetes and mellitus appear
side by side in the title or abstract
Subject headings &
thesaurus terms
• E.g. MeSH terms in PubMed
• Alternative to keyword searching
• Fixed set of terms assigned to define
the main focus of an article
• Each article “tagged” with several
headings
• Heading not necessarily a word that
appears in title or abstract
• PubMed automatically searches MeSH
terms. Check the search details box.
Summary
• Use specialist search engines to
search across a wide range of good
quality web resources
• Use databases to find academic
research articles, both primary
research as well as review articles
EndNote
Please access EndNote today using
the Firefox browser
my.endnote.com

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Clinical Microbiology - searching for information

  • 1. MSc Clinical Microbiology Paula Funnell p.a.funnell@qmul.ac.uk Senior Academic Liaison Librarian (Medicine and Dentistry) Searching for Information
  • 2. Learning outcomes • To be introduced to the library website and search tools • To know where to look for good quality information on the web • To learn how to use key medical databases effectively • To manage references effectively using EndNote
  • 4. Search engines • Search engine = supermarket • Photo by vauvau (http://flic.kr/p/75yAAb) • Searches across many DIFFERENT things
  • 5. Healthcare specific search engines • Search specifically across healthcare related resources • Search across good quality internet resources • Much more manageable number of results
  • 6. Evidence Search • Easy to use • Searches across high-quality healthcare specific resources • Provided and managed by NICE • Wide range of filters allow you to narrow down your search e.g. by type of information or date of publication www.evidence.nhs.uk
  • 7.
  • 8.
  • 9. TRIP • One simple search box • Results are colour coded giving an at a glance indication of quality of information • Results vary widely - including primary research, reviews, textbooks and news www.tripdatabase.com
  • 10.
  • 11.
  • 12. Databases • Databases – florist • Photo by stevewhis (http://flic.kr/p/a4h4RJ) • Collection of SAME thing
  • 13. Databases • Vast collections of references of published research • Filters can be applied to narrow results down • Searches can be combined and saved for future use • References can be imported to EndNote
  • 14. MEDLINE (PubMed) • PubMed is a search interface for the MEDLINE database • Database of references and abstracts of journal articles • Covers the broad field of biomedicine • Special QM PubMed address for easier full-text access www.ncbi.nlm.nih.gov/entrez/query.fcgi?otool=igbqmullib
  • 15.
  • 16.
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  • 18. Web of Science • Part of ISI Web of Knowledge • Contains: – Science Citation Index – Social Sciences Citation Index – Arts and Humanities Citation Index • Need to log in off campus www.webofknowledge.com
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  • 21. Scopus • World’s largest abstract and citation database • Search across a range of subject areas • Includes Medline coverage • Need to log in off campus www.scopus.com
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  • 24. The Cochrane Library • High quality systematic reviews • Already been critically appraised • Full text available • Also contains abstracts of other systematic reviews and clinical trials www.thecochranelibrary.com
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  • 28. Broadening your search • An OR search – combine two synonyms to give a larger number of results • Child health OR paediatrics will search for any articles containing one or both of the terms
  • 29. Broadening your search • Truncation – add an asterisk to the stem of a word • Injur* will search for injury, injuries, injured, injuring . . .
  • 30. Narrowing your search • An AND search – combine two elements of your search question to give a smaller number of results • Asthma AND children will search for any articles containing both of the terms
  • 31. Narrowing your search • Phrase searching – enclose phrase within quotation marks • “diabetes mellitus” will return results where diabetes and mellitus appear side by side in the title or abstract
  • 32. Subject headings & thesaurus terms • E.g. MeSH terms in PubMed • Alternative to keyword searching • Fixed set of terms assigned to define the main focus of an article • Each article “tagged” with several headings • Heading not necessarily a word that appears in title or abstract • PubMed automatically searches MeSH terms. Check the search details box.
  • 33. Summary • Use specialist search engines to search across a wide range of good quality web resources • Use databases to find academic research articles, both primary research as well as review articles
  • 34. EndNote Please access EndNote today using the Firefox browser my.endnote.com