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Developing a Web-based RDF Visualisation
Framework and Instantiating it as a Publication
Visualisation Service
Aufbau eines webbasierten RDF-Visualisierungsframeworks
und Instanziierung als sächsischer Publikations-
Visualisierungsdienst
Jan Polowinski, June 11th 2013
jan dot polowinski at gmail dot com
HTWK Leipzig / IMN
2/26
Outline
• Motivation
• Summary of the project context
• Current status of the project
• Next steps
3/26
(Assumed) Problems in Literature Search
• Information Overflow in the field of publications
• Relevant Papers can be overlooked
• Hard to judge: When to stop?
VISUALISATION
4/26
5/26
Hypothesis
Today‘s visualisation tools are not actually used by
researchers in their daily literature search, because
they suffer from the following technical/political
problems:
Problems
6/26
„Silos“ of data:
Lack of linked open bibliographic data services
Not all visual means exploited
Citationgraphs are rarely available
and not typed
General Goal: Improve and Speed up Scientific
Research by Visualisation
Literature searchers can
• Overview new fields
• Identify „best“ documents
• Understand document context
Librarians, writers of project proposals can
• Classify new documents
• Spot neglected research areas
7/26
Web-based
Visualisation
Framework
for
eScience
Instantiate
Project Context –
PHD Project by Jan Polowinski on Ontology-Driven
Guided Visualisation for RDS/OWL Data
IMPLEMENTATIONANALYSIS
Current Status of the Project
• Instantiation of the approach as a web-
based framework (eViss)
9/26
IMPLEMENTATIONANALYSIS
Current Status of the Project
• What data to visualise?
• How to visualise effectively?
• Preparing and executing a survey
• Instantiation of the approach as a web-
based framework (eViss)
10/26Source: http://cluster.cis.drexel.edu/~cchen/citespace/
Survey: How do Researchers at TU Dresden do
(Electronic) Literature Search?
• supported by
• Sächsische Landesbibliothek – Staats- und Universitätsbibliothek Dresden (SLUB)
• Institut für Kommunikationswissenschaften, TUD
11/26
Survey
Preparation and
Execution
• 2 groups:
• Students
• Research Staff
• -
12/26
Experiences
with existing
visualisations
• Are they used?
• Are users satisfied?
• -
13/26
Context-
Questions
• Media Usage
• Do researchers
prefer electronic
or print media for
reading / taking
notes /
reviewing?
• Research
Experience
• -
14/26
Survey – Results
• Completed questionaires
• 941 from 1254 (Students)
• 279 from 338
(Research Staff)
• 477 additional (free text)
comments
 Great interest
• First results ...
15/26
Students: Do you Know / Use CiteSpace
(a complex visualization suite for citation data)
16/26
3%
>1 %
I don‘t know it
I know, it but I don‘t use it
I use it
IMPLEMENTATIONANALYSIS
Current Status of the Project
• What to visualise?
• How to visualise effectively?
• Preparing and executing the survey
• Instantiation of the approach as a web-
based framework (eViss)
17/26
Implementing the eViss Framework for the eScience
Platform
Basis: OntoWiki
• Web-based editor for RDF
• Developed at Uni Leipzig (2006)
+ Plugins
• Guidance for effective visualisations
• Generating visualisations (based on D3.js)
• Supported by Student work of Pooran Patel
18/26
19/26
• Manage and edit
visualization
settings
Plug-In: Guidance for Effective Visualisations
by Error Messages and Warnings
20/26
Plug-In: Generating Graphics
- Collapsible Tree
21/26
Plug-In: Generating Graphics – Tree Map
22/26
Plug-In: Generating Graphics
– Simple Composition
23/26
• Lightness
• Shape
• Size
Summary and Conclusion
• We instantiated a highly flexible visualisation
approach for the eScience platform as eViss
• Use eViss for publication data
• Linked Publication Data Sources are emerging
right now but not yet fully usable
• Survey is a contribution on ist own: Many insights
on how literature search is done today
24/26
IMPLEMENTATIONANALYSIS
Next Steps
• What to visualise?
• How to visualise effectively?
• Preparing and executing the survey
• Completing the survey evaluation
• Drawing conclusion for the choice of
graphics
• Instantiation of the approach as a web-
based framework (eViss)
• Setting up the Framework for publication
data
• Preparation of suitable graphic
representations
25/26
END/DISCUSSION
http://www-st.inf.tu-dresden.de/semvis/blog/
 jan.polowinski at tu-dresden.de
BACKUP SLIDES 
Acknowledgements
• This research has been co-funded by the European Social Fond / Free State of Saxony,
contract no. 1330674013 (eScience – network).
• Timeline of SW-events created by using the SIMILE Timeline: http://www.simile-
widgets.org/timeline/ ; Dates: Wikipedia / official Websites
• Screenshots of Tools:
• CiteSpace: http://cluster.cis.drexel.edu/~cchen/citespace/
27/26
BACKUP SLIDES 
BACKUP SLIDES
29/26
Tablets/e-Ink
Bibliographic-
Ontologies
Crowd-
sourcing
Open Access
+ Enhanced
Publications
Linked (Open)
Data
Visualisation
SemVis
PhD Project
Ontology driven
visualisation
Literature-
Recherche-
Tools
Publication
Visualisation
Web-based
RDF
Visualisation-
framework
(Internal)
structured
data
Context of the Project
What to Visualise?
BASIC DATA
• Bibliographic-Data
 Title
 Abstract
 Author
 ...
• Simple Citation Relations
• Derived:
 Co-Autor
 Co-Citation
OPTIONAL
• Financing (Potential influence)
• Typed Citation Relations
• summarizes
• criticises
• confirmes
• disproves
30/26
somehow cites
has disproved
disproved by
How to visualise beyond node-link diagrams?
s
Publica on
E
Publica on
F
Publica on
G
Publica on B
Publica on
C
Publica on A
A builds on B …
Publica on A
(discusses B)
Publica on B
Publica on C
(confirms A;
cri ques B)
can be seen as an area
connector
31/26
Class Book A
Book A
Evaluation
• Test cases of literature-recherche
• Two groups for comparison
• e.g., Google Scholar vs. Visualisation
32/26
Developing a Web-based RDF Visualisation Framework and Instantiating it as a Publication Visualisation Service
Developing a Web-based RDF Visualisation Framework and Instantiating it as a Publication Visualisation Service
Developing a Web-based RDF Visualisation Framework and Instantiating it as a Publication Visualisation Service

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Developing a Web-based RDF Visualisation Framework and Instantiating it as a Publication Visualisation Service

  • 1. Developing a Web-based RDF Visualisation Framework and Instantiating it as a Publication Visualisation Service Aufbau eines webbasierten RDF-Visualisierungsframeworks und Instanziierung als sächsischer Publikations- Visualisierungsdienst Jan Polowinski, June 11th 2013 jan dot polowinski at gmail dot com HTWK Leipzig / IMN
  • 2. 2/26 Outline • Motivation • Summary of the project context • Current status of the project • Next steps
  • 3. 3/26 (Assumed) Problems in Literature Search • Information Overflow in the field of publications • Relevant Papers can be overlooked • Hard to judge: When to stop?
  • 5. 5/26 Hypothesis Today‘s visualisation tools are not actually used by researchers in their daily literature search, because they suffer from the following technical/political problems:
  • 6. Problems 6/26 „Silos“ of data: Lack of linked open bibliographic data services Not all visual means exploited Citationgraphs are rarely available and not typed
  • 7. General Goal: Improve and Speed up Scientific Research by Visualisation Literature searchers can • Overview new fields • Identify „best“ documents • Understand document context Librarians, writers of project proposals can • Classify new documents • Spot neglected research areas 7/26
  • 8. Web-based Visualisation Framework for eScience Instantiate Project Context – PHD Project by Jan Polowinski on Ontology-Driven Guided Visualisation for RDS/OWL Data
  • 9. IMPLEMENTATIONANALYSIS Current Status of the Project • Instantiation of the approach as a web- based framework (eViss) 9/26
  • 10. IMPLEMENTATIONANALYSIS Current Status of the Project • What data to visualise? • How to visualise effectively? • Preparing and executing a survey • Instantiation of the approach as a web- based framework (eViss) 10/26Source: http://cluster.cis.drexel.edu/~cchen/citespace/
  • 11. Survey: How do Researchers at TU Dresden do (Electronic) Literature Search? • supported by • Sächsische Landesbibliothek – Staats- und Universitätsbibliothek Dresden (SLUB) • Institut für Kommunikationswissenschaften, TUD 11/26
  • 12. Survey Preparation and Execution • 2 groups: • Students • Research Staff • - 12/26
  • 13. Experiences with existing visualisations • Are they used? • Are users satisfied? • - 13/26
  • 14. Context- Questions • Media Usage • Do researchers prefer electronic or print media for reading / taking notes / reviewing? • Research Experience • - 14/26
  • 15. Survey – Results • Completed questionaires • 941 from 1254 (Students) • 279 from 338 (Research Staff) • 477 additional (free text) comments  Great interest • First results ... 15/26
  • 16. Students: Do you Know / Use CiteSpace (a complex visualization suite for citation data) 16/26 3% >1 % I don‘t know it I know, it but I don‘t use it I use it
  • 17. IMPLEMENTATIONANALYSIS Current Status of the Project • What to visualise? • How to visualise effectively? • Preparing and executing the survey • Instantiation of the approach as a web- based framework (eViss) 17/26
  • 18. Implementing the eViss Framework for the eScience Platform Basis: OntoWiki • Web-based editor for RDF • Developed at Uni Leipzig (2006) + Plugins • Guidance for effective visualisations • Generating visualisations (based on D3.js) • Supported by Student work of Pooran Patel 18/26
  • 19. 19/26 • Manage and edit visualization settings
  • 20. Plug-In: Guidance for Effective Visualisations by Error Messages and Warnings 20/26
  • 21. Plug-In: Generating Graphics - Collapsible Tree 21/26
  • 22. Plug-In: Generating Graphics – Tree Map 22/26
  • 23. Plug-In: Generating Graphics – Simple Composition 23/26 • Lightness • Shape • Size
  • 24. Summary and Conclusion • We instantiated a highly flexible visualisation approach for the eScience platform as eViss • Use eViss for publication data • Linked Publication Data Sources are emerging right now but not yet fully usable • Survey is a contribution on ist own: Many insights on how literature search is done today 24/26
  • 25. IMPLEMENTATIONANALYSIS Next Steps • What to visualise? • How to visualise effectively? • Preparing and executing the survey • Completing the survey evaluation • Drawing conclusion for the choice of graphics • Instantiation of the approach as a web- based framework (eViss) • Setting up the Framework for publication data • Preparation of suitable graphic representations 25/26
  • 27. Acknowledgements • This research has been co-funded by the European Social Fond / Free State of Saxony, contract no. 1330674013 (eScience – network). • Timeline of SW-events created by using the SIMILE Timeline: http://www.simile- widgets.org/timeline/ ; Dates: Wikipedia / official Websites • Screenshots of Tools: • CiteSpace: http://cluster.cis.drexel.edu/~cchen/citespace/ 27/26 BACKUP SLIDES 
  • 29. 29/26 Tablets/e-Ink Bibliographic- Ontologies Crowd- sourcing Open Access + Enhanced Publications Linked (Open) Data Visualisation SemVis PhD Project Ontology driven visualisation Literature- Recherche- Tools Publication Visualisation Web-based RDF Visualisation- framework (Internal) structured data Context of the Project
  • 30. What to Visualise? BASIC DATA • Bibliographic-Data  Title  Abstract  Author  ... • Simple Citation Relations • Derived:  Co-Autor  Co-Citation OPTIONAL • Financing (Potential influence) • Typed Citation Relations • summarizes • criticises • confirmes • disproves 30/26 somehow cites has disproved disproved by
  • 31. How to visualise beyond node-link diagrams? s Publica on E Publica on F Publica on G Publica on B Publica on C Publica on A A builds on B … Publica on A (discusses B) Publica on B Publica on C (confirms A; cri ques B) can be seen as an area connector 31/26 Class Book A Book A
  • 32. Evaluation • Test cases of literature-recherche • Two groups for comparison • e.g., Google Scholar vs. Visualisation 32/26