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DIQA Projektmanagement GmbH
Pfinztalstraße 90
76227 Karlsruhe
info@diqa-pm.com
L I F E S C I E N C E S D A T A A N D
M E D I C A L V O C A B U L A R I E S
I N S H A R E P O I N T 2 0 1 0
V E R S I O N 1 . 3 0 6 / 2 0 1 3
© 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 2GRASP Product Presentation
Medical vocabularies and Lifesciences data
Benefits of GRASP for Lifesciences:
1. Maximum reuse of existing vocabularies and
data assets
2. Improved data quality
3. Significantly reduced time for collaboratively
editing taxonomies
4. SharePoint-based (electronic drug or healthcare)
knowledge bases are enriched with information
from Linked Data sources
5. Regulatory compliance regarding the use of
data standards
6. Decreased time to market, cost, and resources
as a result of improved business processes
© 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 3GRASP Product Presentation
Medical vocabularies and Lifesciences data
Features
• Import vocabularies, like ICD-10, into SharePoint to
make them available in electronic medical records or
for clinical trial management
• Explore vocabularies in SharePoint, e.g. to facilitate
medical coding
• Poly-hierarchies: complex terminologies are frequent
in the Lifesciences domain, e.g. GeneOntology.
GRASP supports terms with multiple parents.
• Enrich SharePoint data with Linked Data, e.g. from
Bio2RDF or LinkedLifeData
• Use Semantic Tags to create intelligent document
filters that use domain knowledge.
© 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 4GRASP Product Presentation
Manage all
terminologies
in a library.
http://server/
1. Library of ontologies
© 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 5GRASP Product Presentation
http://server/
2. Select the term
store and the
update strategy.
1. Select a
terminology or
taxonomy to
populate a term
store…
1. Load terminologies into the termstore
© 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 6GRASP Product Presentation
Provide regular users
with terminology
browsers outside the
SharePoint termstore
management, e.g.
the ICD-10 browser.
3. Terminology browser
© 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 7GRASP Product Presentation
4. Poly-Hierarchies
Terms can be located in
multiple subtrees at the
same time, allowing to
navigate to the term via
different routes. Poly-
Hierarchies are frequent in
Lifesciences ontologies, like
the GeneOntology.
© 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 8GRASP Product Presentation
5. Enrich SharePoint Data with Linked Data
Terms from the
GeneOntology are used as
“Semantic Tags” for
SharePoint documents.
The document list shows all
documents tagged with a
certain term (“Label”).
“Definition” is retrieved from
LinkedLifeData.
© 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 9GRASP Product Presentation
6. Use Linked Data to Filter SharePoint Documents
Terms from Uniprot are used as
“Semantic Tags”. Each tags is associated
with an enzyme in Uniprot. This list of
documents is generated from a SPARQL-
query that returns all documents about
an enzyme, that has “Magnesium” as
cofactor.
© 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 10GRASP Product Presentation
Get Started Now!
Read more about GRASP:
http://www.diqa-pm.com/en/GRASP
Product Downloads:
http://www.diqa-pm.com/en/Downloads
Contact DIQA:
mail: info@diqa-pm.com
phone: +49 (0) 721 609 517 25
DIQA Projektmanagement GmbH
Pfinztalstraße 90
76227 Karlsruhe
info@diqa-pm.com
Visit us on http://www.diqa-pm.com
Product Presentation

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Medical vocabularies and Lifesciences data in SharePoint with GRASP 1.3

  • 1. DIQA Projektmanagement GmbH Pfinztalstraße 90 76227 Karlsruhe info@diqa-pm.com L I F E S C I E N C E S D A T A A N D M E D I C A L V O C A B U L A R I E S I N S H A R E P O I N T 2 0 1 0 V E R S I O N 1 . 3 0 6 / 2 0 1 3
  • 2. © 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 2GRASP Product Presentation Medical vocabularies and Lifesciences data Benefits of GRASP for Lifesciences: 1. Maximum reuse of existing vocabularies and data assets 2. Improved data quality 3. Significantly reduced time for collaboratively editing taxonomies 4. SharePoint-based (electronic drug or healthcare) knowledge bases are enriched with information from Linked Data sources 5. Regulatory compliance regarding the use of data standards 6. Decreased time to market, cost, and resources as a result of improved business processes
  • 3. © 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 3GRASP Product Presentation Medical vocabularies and Lifesciences data Features • Import vocabularies, like ICD-10, into SharePoint to make them available in electronic medical records or for clinical trial management • Explore vocabularies in SharePoint, e.g. to facilitate medical coding • Poly-hierarchies: complex terminologies are frequent in the Lifesciences domain, e.g. GeneOntology. GRASP supports terms with multiple parents. • Enrich SharePoint data with Linked Data, e.g. from Bio2RDF or LinkedLifeData • Use Semantic Tags to create intelligent document filters that use domain knowledge.
  • 4. © 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 4GRASP Product Presentation Manage all terminologies in a library. http://server/ 1. Library of ontologies
  • 5. © 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 5GRASP Product Presentation http://server/ 2. Select the term store and the update strategy. 1. Select a terminology or taxonomy to populate a term store… 1. Load terminologies into the termstore
  • 6. © 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 6GRASP Product Presentation Provide regular users with terminology browsers outside the SharePoint termstore management, e.g. the ICD-10 browser. 3. Terminology browser
  • 7. © 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 7GRASP Product Presentation 4. Poly-Hierarchies Terms can be located in multiple subtrees at the same time, allowing to navigate to the term via different routes. Poly- Hierarchies are frequent in Lifesciences ontologies, like the GeneOntology.
  • 8. © 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 8GRASP Product Presentation 5. Enrich SharePoint Data with Linked Data Terms from the GeneOntology are used as “Semantic Tags” for SharePoint documents. The document list shows all documents tagged with a certain term (“Label”). “Definition” is retrieved from LinkedLifeData.
  • 9. © 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 9GRASP Product Presentation 6. Use Linked Data to Filter SharePoint Documents Terms from Uniprot are used as “Semantic Tags”. Each tags is associated with an enzyme in Uniprot. This list of documents is generated from a SPARQL- query that returns all documents about an enzyme, that has “Magnesium” as cofactor.
  • 10. © 2013 DIQA Projektmanagement GmbH | www.diqa-pm.com | Slide 10GRASP Product Presentation Get Started Now! Read more about GRASP: http://www.diqa-pm.com/en/GRASP Product Downloads: http://www.diqa-pm.com/en/Downloads Contact DIQA: mail: info@diqa-pm.com phone: +49 (0) 721 609 517 25
  • 11. DIQA Projektmanagement GmbH Pfinztalstraße 90 76227 Karlsruhe info@diqa-pm.com Visit us on http://www.diqa-pm.com Product Presentation